Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0617
         (625 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    24   0.90 
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   1.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   1.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   1.6  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   6.3  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   8.4  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    21   8.4  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   8.4  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   8.4  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   8.4  

>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 24.2 bits (50), Expect = 0.90
 Identities = 16/55 (29%), Positives = 25/55 (45%)
 Frame = +3

Query: 246 LQKNQYKDTQALHRQIEGHQE*NSRLQECNRFCFNGQRILTKQRTNYAISFNSIQ 410
           ++ + Y+   A  RQI  HQE     Q CN F  +   +L +Q     I+   I+
Sbjct: 142 IEHSDYRAKLAQIRQIY-HQELEKYEQACNEFTTHVMNLLREQSRTRPITPKEIE 195


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -1

Query: 298 PSICLCNACVSLYWFFCSVGPLSF 227
           P  CL   C +L  F+C  G + F
Sbjct: 61  PVKCLAFFCTALVIFYCQEGSVDF 84


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -1

Query: 298 PSICLCNACVSLYWFFCSVGPLSF 227
           P  CL   C +L  F+C  G + F
Sbjct: 294 PVKCLAFFCTALVIFYCQEGSVDF 317


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -1

Query: 298 PSICLCNACVSLYWFFCSVGPLSF 227
           P  CL   C +L  F+C  G + F
Sbjct: 294 PVKCLAFFCTALVIFYCQEGSVDF 317


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = +3

Query: 339 FCFNGQRILTKQRTNYAISFNSIQLYK-MDTLGDVCTCYKNVTYNVHNICFQ 491
           +C  G  + T  RT +    N  Q +  +D   +    + N TY+ HN+ F+
Sbjct: 534 YCSRGD-LQTYLRTAWDKFTNMQQQFAYIDESSNSSNYFANKTYDFHNMSFE 584


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/28 (25%), Positives = 16/28 (57%)
 Frame = -1

Query: 478 LCTL*VTFL*HVQTSPSVSILYNCIELN 395
           LC++    + HV++ P+++    C+  N
Sbjct: 181 LCSIPQMVVFHVESHPNITWYQQCVTYN 208


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +2

Query: 491 KNYRR*KNYLQCI 529
           KN R  KNYL CI
Sbjct: 34  KNDRLTKNYLDCI 46


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/28 (25%), Positives = 16/28 (57%)
 Frame = -1

Query: 478 LCTL*VTFL*HVQTSPSVSILYNCIELN 395
           LC++    + HV++ P+++    C+  N
Sbjct: 181 LCSIPQMVVFHVESHPNITWYQQCVTYN 208


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -2

Query: 228 FINSVM*PQYVCIWFKVLPIIAQLAFHE 145
           + +SV   QYV I  K LP +   A HE
Sbjct: 144 YSSSVGYTQYVRIAAKGLPTLKLFALHE 171


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -1

Query: 301 CPSICLCNACVSLY 260
           C  +CL + CV L+
Sbjct: 195 CADLCLLSECVDLF 208


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,545
Number of Sequences: 336
Number of extensions: 2847
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)