Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0617
         (625 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z98261-1|CAB10931.1|  920|Caenorhabditis elegans Hypothetical pr...    53   1e-07
Z71266-11|CAA95847.1|  920|Caenorhabditis elegans Hypothetical p...    53   1e-07
Z71258-16|CAA95786.1|  920|Caenorhabditis elegans Hypothetical p...    53   1e-07
AC024751-3|AAK21513.2|  440|Caenorhabditis elegans Hypothetical ...    41   8e-04
AC006753-3|AAN73854.2|  286|Caenorhabditis elegans Hypothetical ...    35   0.054
Z74031-2|CAA98454.2|  568|Caenorhabditis elegans Hypothetical pr...    34   0.072
Z98866-17|CAB11566.3|  534|Caenorhabditis elegans Hypothetical p...    31   0.88 
AF099919-8|AAC68800.1|  488|Caenorhabditis elegans Hypothetical ...    28   6.2  
Z82263-6|CAJ76936.1|  383|Caenorhabditis elegans Hypothetical pr...    27   8.2  
Z82263-3|CAB62793.2|  451|Caenorhabditis elegans Hypothetical pr...    27   8.2  
Z82263-2|CAE46670.1|  445|Caenorhabditis elegans Hypothetical pr...    27   8.2  
U70845-4|AAB09102.1|  340|Caenorhabditis elegans Hypothetical pr...    27   8.2  

>Z98261-1|CAB10931.1|  920|Caenorhabditis elegans Hypothetical
           protein C01H6.9 protein.
          Length = 920

 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 21/54 (38%), Positives = 34/54 (62%)
 Frame = +1

Query: 73  LYNDLADDDGLFDAVGDYQFEVYRLMKSKLGNDWKNFEPYTNILWLHYTVDKMI 234
           +Y DL +D  +F+   D QFEVYR M+    ++WK F   TN++W+ Y  +++I
Sbjct: 811 VYWDLENDPAIFEGQDDPQFEVYREMRKNCKSNWKKFSRRTNLMWIVYIANRLI 864


>Z71266-11|CAA95847.1|  920|Caenorhabditis elegans Hypothetical
           protein C01H6.9 protein.
          Length = 920

 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 21/54 (38%), Positives = 34/54 (62%)
 Frame = +1

Query: 73  LYNDLADDDGLFDAVGDYQFEVYRLMKSKLGNDWKNFEPYTNILWLHYTVDKMI 234
           +Y DL +D  +F+   D QFEVYR M+    ++WK F   TN++W+ Y  +++I
Sbjct: 811 VYWDLENDPAIFEGQDDPQFEVYREMRKNCKSNWKKFSRRTNLMWIVYIANRLI 864


>Z71258-16|CAA95786.1|  920|Caenorhabditis elegans Hypothetical
           protein C01H6.9 protein.
          Length = 920

 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 21/54 (38%), Positives = 34/54 (62%)
 Frame = +1

Query: 73  LYNDLADDDGLFDAVGDYQFEVYRLMKSKLGNDWKNFEPYTNILWLHYTVDKMI 234
           +Y DL +D  +F+   D QFEVYR M+    ++WK F   TN++W+ Y  +++I
Sbjct: 811 VYWDLENDPAIFEGQDDPQFEVYREMRKNCKSNWKKFSRRTNLMWIVYIANRLI 864


>AC024751-3|AAK21513.2|  440|Caenorhabditis elegans Hypothetical
           protein Y18H1A.10 protein.
          Length = 440

 Score = 40.7 bits (91), Expect = 8e-04
 Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
 Frame = +1

Query: 73  LYNDLADDDGLFDAVGDYQFEVYRLMKS------KLGNDWKNFEPYTNILWLHYTVDKMI 234
           +Y DL +D  +F+     QFEVYR M+       +   +W+ F   TN++W+ Y  +++I
Sbjct: 324 IYWDLEEDTTIFEGPDAPQFEVYREMRENCRYRYRYRGNWEKFSRRTNLMWIVYIANRLI 383

Query: 235 -TALRYKRTNTKIHKHYIDKLKGIKNRILDYKSATDFVLTDNEY 363
            T +  +   T   +    +LK + +R+ ++ S  +  LTD E+
Sbjct: 384 DTEICPEGLFTDKRR---KELKHLFDRLAEFGSCEE-SLTDAEF 423


>AC006753-3|AAN73854.2|  286|Caenorhabditis elegans Hypothetical
           protein Y40A1A.1 protein.
          Length = 286

 Score = 34.7 bits (76), Expect = 0.054
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +1

Query: 73  LYNDLADDDGLFDAVGDYQFEVYRLMKS 156
           +Y D+  D  +F+  GD QF+VYR M+S
Sbjct: 256 IYEDMEKDGAMFEGFGDSQFDVYREMRS 283


>Z74031-2|CAA98454.2|  568|Caenorhabditis elegans Hypothetical
           protein F32D8.2 protein.
          Length = 568

 Score = 34.3 bits (75), Expect = 0.072
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = +3

Query: 441 CTCYKNVTYNVHNICFQKTIDAKRIIYNALVKCQLRGALDKVVPLTRF 584
           CT YKN   N H I  +K +  K   YN    C+  G ++ + P   F
Sbjct: 133 CTFYKNSGPNEHPIKVEKNVPVKVPFYNFAFACERNGIVEFLKPFVNF 180


>Z98866-17|CAB11566.3|  534|Caenorhabditis elegans Hypothetical
           protein Y49E10.20 protein.
          Length = 534

 Score = 30.7 bits (66), Expect = 0.88
 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = +3

Query: 390 ISFNSIQLYKMDTLGDVCTCYKNVTYNVHNICFQKTIDAKRI-IYNALVKCQLRGALDKV 566
           + + + +LY  +      TC+ ++   + NI FQK IDA  + I+   +K  +   L  V
Sbjct: 122 VFYKNQKLYHFNKNASCPTCHLDMKVTIPNIVFQKLIDAADVTIFGVRIKFAIESVLKMV 181


>AF099919-8|AAC68800.1|  488|Caenorhabditis elegans Hypothetical
           protein F40G9.5 protein.
          Length = 488

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +1

Query: 52  APARCAALYNDLADDDGLFDAVGDYQFEVYRLMKSKLGNDWKNFE 186
           AP +  A +   A+     D   D +FE+Y +M     ND KN E
Sbjct: 156 APVQSHAPHTYRAEAQDTNDGPFDKEFEIYMIMVHSCSNDGKNRE 200


>Z82263-6|CAJ76936.1|  383|Caenorhabditis elegans Hypothetical
           protein C47A4.2c protein.
          Length = 383

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 15/37 (40%), Positives = 26/37 (70%), Gaps = 2/37 (5%)
 Frame = -1

Query: 595 MNLLNLVKGTTLSK--APLS*HFTNAL*IILLASIVF 491
           +N+LNL++G  L +  APL+  F + L +I+LA ++F
Sbjct: 46  INVLNLIRGPLLYRVLAPLA--FNSLLIVIILALVIF 80


>Z82263-3|CAB62793.2|  451|Caenorhabditis elegans Hypothetical
           protein C47A4.2b protein.
          Length = 451

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 15/37 (40%), Positives = 26/37 (70%), Gaps = 2/37 (5%)
 Frame = -1

Query: 595 MNLLNLVKGTTLSK--APLS*HFTNAL*IILLASIVF 491
           +N+LNL++G  L +  APL+  F + L +I+LA ++F
Sbjct: 114 INVLNLIRGPLLYRVLAPLA--FNSLLIVIILALVIF 148


>Z82263-2|CAE46670.1|  445|Caenorhabditis elegans Hypothetical
           protein C47A4.2a protein.
          Length = 445

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 15/37 (40%), Positives = 26/37 (70%), Gaps = 2/37 (5%)
 Frame = -1

Query: 595 MNLLNLVKGTTLSK--APLS*HFTNAL*IILLASIVF 491
           +N+LNL++G  L +  APL+  F + L +I+LA ++F
Sbjct: 108 INVLNLIRGPLLYRVLAPLA--FNSLLIVIILALVIF 142


>U70845-4|AAB09102.1|  340|Caenorhabditis elegans Hypothetical
           protein F22H10.5 protein.
          Length = 340

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 73  LYNDLADDDGLFDAVGDYQFEVYRLMK 153
           +Y D   D  +F+   D QF+VYR M+
Sbjct: 310 IYVDTEIDTAMFEGFSDSQFDVYREMR 336


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,188,099
Number of Sequences: 27780
Number of extensions: 255292
Number of successful extensions: 756
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 755
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)