Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0616
(687 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0897 - 6903294-6903401,6903781-6903855,6904239-6904379,690... 68 6e-12
01_07_0180 + 41832357-41832680,41833024-41833367,41833789-418339... 52 3e-07
10_08_0708 + 20040482-20040808,20040906-20041280 50 1e-06
10_08_0724 + 20114796-20115506 49 4e-06
03_02_0592 - 9687700-9687933,9688515-9688591,9688891-9688999,968... 49 4e-06
10_08_0702 + 19978917-19979243,19979350-19979724 47 2e-05
10_08_0692 + 19918746-19919072,19919419-19919781,19919841-199199... 46 4e-05
01_07_0183 + 41840089-41840394,41840869-41841249 45 7e-05
10_08_0700 + 19969616-19969942,19970044-19970422,19970562-19970665 44 9e-05
10_06_0109 + 10883034-10883780 44 2e-04
05_01_0123 - 846081-846167,846264-846404,846749-846866,847382-84... 44 2e-04
03_05_0204 - 21961332-21961715,21962030-21962374 43 2e-04
10_08_0710 + 20070655-20070990,20071074-20071469 43 3e-04
10_08_0707 + 20037301-20037633,20037862-20038248 42 6e-04
05_04_0304 - 20048518-20049003,20049074-20049412 42 6e-04
11_02_0046 + 7711536-7711568,7711685-7711850,7712251-7712339,771... 41 8e-04
01_07_0182 + 41838805-41839152,41839230-41839610 41 8e-04
01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443 40 0.001
01_07_0184 + 41846416-41847132 40 0.002
10_08_0715 + 20084586-20084912,20085030-20085416 40 0.002
10_08_0714 + 20081801-20082130,20082205-20082597 40 0.002
02_04_0267 - 21430370-21430474,21430559-21430618,21430937-214310... 40 0.002
12_01_0675 + 5759641-5759722,5760247-5760291,5760690-5760775,576... 36 0.040
03_02_0591 - 9682476-9682487,9682805-9682885,9683085-9683192,968... 35 0.053
12_01_0674 + 5755523-5755613,5756325-5756366,5756830-5756915,575... 35 0.070
07_03_0313 + 16620817-16621515 35 0.070
>06_01_0897 -
6903294-6903401,6903781-6903855,6904239-6904379,
6904496-6904646,6905035-6905178,6905276-6905366,
6906071-6906308
Length = 315
Score = 68.1 bits (159), Expect = 6e-12
Identities = 30/76 (39%), Positives = 49/76 (64%)
Frame = +1
Query: 262 CPYAERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSPKGTVPAL*YEPGKALFDSNIINV 441
CP+ +R +LT+ K++PYD+ ++L KP+W SP+G VP + E + + DS++I
Sbjct: 80 CPFTQRVLLTIEEKHLPYDIKLVDLANKPDWFLKISPEGKVPIVKLEE-QWVADSDVITQ 138
Query: 442 YLDEKYPEIPLQASDP 489
++EKYPE P A+ P
Sbjct: 139 AIEEKYPE-PSLATPP 153
>01_07_0180 +
41832357-41832680,41833024-41833367,41833789-41833945,
41834119-41834430,41834537-41834908
Length = 502
Score = 52.4 bits (120), Expect = 3e-07
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +1
Query: 265 PYAERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSP-KGTVPAL*YEPGKALFDSNIINV 441
P+ R + L K +PY+L+ ++ K E + +P VP L + A+ +S +I
Sbjct: 17 PFVHRVEVALRLKGVPYELILEDMGNKSELLLAHNPVHKMVPVLLHGDRSAICESLVIVE 76
Query: 442 YLDEKYPEIPLQASDPLRRAQDKILV 519
Y+DE + PL +DPLRRA + V
Sbjct: 77 YVDEAFDGPPLLPADPLRRAMARFWV 102
Score = 41.5 bits (93), Expect = 6e-04
Identities = 21/78 (26%), Positives = 39/78 (50%)
Frame = +1
Query: 268 YAERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSPKGTVPAL*YEPGKALFDSNIINVYL 447
Y R + L K + Y+L+ +L K + + N +P + + ++L +S +I Y+
Sbjct: 290 YGHRAEVALRLKGVRYELILEDLRNKSDLLLNHNPVHKLVPVLLHGDRSLSESLVILEYI 349
Query: 448 DEKYPEIPLQASDPLRRA 501
DE + P+ +DP RA
Sbjct: 350 DESFHGPPILPTDPYDRA 367
>10_08_0708 + 20040482-20040808,20040906-20041280
Length = 233
Score = 50.4 bits (115), Expect = 1e-06
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Frame = +1
Query: 235 KLRVFAMRFCPYAERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSP-KGTVPAL*YEPGK 411
+L++ M P+A R L L+ K + Y+ V +L K E + +P VP L + GK
Sbjct: 7 ELKLLGMWASPFALRAKLALSFKGLSYEYVEEDLKNKSELLLTSNPVHKKVPVLIHN-GK 65
Query: 412 ALFDSNIINVYLDEKYPE--IPLQASDPLRRA 501
+ +S +I Y+DE +P+ +PL SDP RA
Sbjct: 66 PVCESQVIVQYIDEAFPDAGVPLLPSDPYDRA 97
>10_08_0724 + 20114796-20115506
Length = 236
Score = 48.8 bits (111), Expect = 4e-06
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Frame = +1
Query: 229 SGKLRVFAMRFCPYAERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSP-KGTVPAL*YEP 405
SG+L++ + PYA R + LN K++PY+ V NL K + + +P +VP L
Sbjct: 4 SGELKLLGVWSSPYAIRVRVVLNLKSLPYEYVEENLGDKSDLLLASNPVHKSVPVL-LHA 62
Query: 406 GKALFDSNIINVYLDEKYP-----EIPLQASDPLRRA 501
G+ + +S +I Y+DE +P + SDP RA
Sbjct: 63 GRPVNESQVIVQYIDEVWPGGAGGRPSVMPSDPYERA 99
>03_02_0592 -
9687700-9687933,9688515-9688591,9688891-9688999,
9689162-9689260,9689368-9689454,9689570-9689630,
9689739-9689813,9689936-9689961
Length = 255
Score = 48.8 bits (111), Expect = 4e-06
Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 6/116 (5%)
Frame = +1
Query: 220 PP--YSGKLRVFAMRFCPYAERTVLTLNAKNI--PYDLVFINLDQKPEWI-FNFSPKGTV 384
PP + G R++ FCP+A+R + N K + +LV I+L KP W +GTV
Sbjct: 25 PPRLFDGTTRLYICYFCPFAQRAWIIRNFKGLQDKIELVGIDLQDKPAWYKEKVYEQGTV 84
Query: 385 PAL*YEPGKALFDSNIINVYLDEKYPEIPLQASDPLRRA-QDKILVESFAPAQSAY 549
P+L + GK + +S + Y+D + L DP +R D+++ + A ++ Y
Sbjct: 85 PSLEHN-GKIMGESLDLIKYIDSHFEGPALLPEDPEKRQFADELIAYANAFTKALY 139
>10_08_0702 + 19978917-19979243,19979350-19979724
Length = 233
Score = 46.8 bits (106), Expect = 2e-05
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Frame = +1
Query: 235 KLRVFAMRFCPYAERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSPKGT-VPAL*YEPGK 411
+L++ M PY R L L+ K + Y+ V +L K E + + +P VP L + GK
Sbjct: 7 ELKLLGMWASPYVLRVKLALSLKGLDYEYVEEDLKNKSELLLSSNPVNKKVPVLIHN-GK 65
Query: 412 ALFDSNIINVYLDEKYPE--IPLQASDPLRRA 501
+ +S II YLDE +P+ L +DP RA
Sbjct: 66 PVCESQIILQYLDEAFPDAGATLLPADPHERA 97
>10_08_0692 +
19918746-19919072,19919419-19919781,19919841-19919977,
19920298-19920304
Length = 277
Score = 45.6 bits (103), Expect = 4e-05
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Frame = +1
Query: 235 KLRVFAMRFCPYAERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSP-KGTVPAL*YEPGK 411
+L++ M P+A R L L+ K + YD V + K E + + +P VP L + GK
Sbjct: 7 ELKLLGMWASPFALRAKLALSFKGLSYDYVEEDFKNKSELLLSSNPVHKKVPVLIHN-GK 65
Query: 412 ALFDSNIINVYLDEKYPE--IPLQASDPLRRA 501
+ +S +I Y+DE +P+ + L +DP RA
Sbjct: 66 PICESQVIVQYIDEVFPDAGVTLLPADPHDRA 97
>01_07_0183 + 41840089-41840394,41840869-41841249
Length = 228
Score = 44.8 bits (101), Expect = 7e-05
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +1
Query: 265 PYAERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSP-KGTVPAL*YEPGKALFDSNIINV 441
P+ R L K + Y+L+ +L K + + +P VP L + G+++ +S ++
Sbjct: 11 PFGHRAEAALRLKGVQYELLLEDLRSKSDLLLAHNPVHKLVPVLLHSDGRSVAESLVVVQ 70
Query: 442 YLDEKYPEIPLQASDPLRRAQ 504
Y+D+ + PL +DP RAQ
Sbjct: 71 YVDDAFHGPPLLPADPYARAQ 91
>10_08_0700 + 19969616-19969942,19970044-19970422,19970562-19970665
Length = 269
Score = 44.4 bits (100), Expect = 9e-05
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Frame = +1
Query: 235 KLRVFAMRFCPYAERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSP-KGTVPAL*YEPGK 411
+L++ M P+A R L L+ K + YD V + K + + + +P VP L ++ GK
Sbjct: 7 ELKLLGMWASPFALRAKLALSFKGLSYDYVEEDFKNKSDVLLSSNPVHKKVPVLIHK-GK 65
Query: 412 ALFDSNIINVYLDEKYPE--IPLQASDPLRRA 501
+ +S +I Y+DE +P+ + L +DP RA
Sbjct: 66 PICESQVIVQYIDEVFPDAGVTLLPADPHDRA 97
>10_06_0109 + 10883034-10883780
Length = 248
Score = 43.6 bits (98), Expect = 2e-04
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Frame = +1
Query: 265 PYAERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSP-KGTVPAL*YEPGKALFDSNIINV 441
P+ R L L + + YDLV ++LD+K + + +P VP L + G+ + +S +I
Sbjct: 26 PFVTRVELALALRGLTYDLVAVDLDRKTDLLLAANPVHAKVPVLIHR-GRPVCESRVILE 84
Query: 442 YLDEKYPEIPLQASDPLRRAQDKILVESFAPAQSAYYTAAFNA 570
Y+D+ +P P PL D L + A +A+ F A
Sbjct: 85 YIDDAFP-FPGGGGAPLLPPADDPLARAAARFWAAHVDDEFVA 126
>05_01_0123 -
846081-846167,846264-846404,846749-846866,847382-847528,
848439-848441,848590-848627,848808-848851,848959-849016
Length = 211
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/67 (32%), Positives = 36/67 (53%)
Frame = +1
Query: 262 CPYAERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSPKGTVPAL*YEPGKALFDSNIINV 441
CP+++R +LTL K + ++ P+ SP+G VP GK + DS++I
Sbjct: 20 CPFSQRVLLTLEEKKM--FSAASGVETVPQLFLKISPEGKVPVFNGGDGKWIPDSDVITQ 77
Query: 442 YLDEKYP 462
++EKYP
Sbjct: 78 VIEEKYP 84
>03_05_0204 - 21961332-21961715,21962030-21962374
Length = 242
Score = 43.2 bits (97), Expect = 2e-04
Identities = 34/141 (24%), Positives = 64/141 (45%), Gaps = 2/141 (1%)
Frame = +1
Query: 265 PYAERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSP-KGTVPAL*YEPGKALFDSNIINV 441
P+ R + L K + Y+ + +L+ K + + +P VP L +A+ +S +I
Sbjct: 14 PFVHRAEVALRLKGVAYEFIHEDLNNKSDLLLAKNPIHKKVPVL-LHGDRAVCESLVIVE 72
Query: 442 YLDEKYPEIPLQASDPLRRAQDKILVESFAPAQSAYYTAAFNAQALEPSMVETYHKDLRD 621
Y+DE + PL +DP RA + F ++ + +F + + PS + + + +
Sbjct: 73 YIDEAFNGPPLLPADPYHRAMARFWAH-FIDHKAIFSCHSFKSYSTRPSWLALWLEG-EE 130
Query: 622 YKKSLKRAVLNI-YMGTSLGG 681
K LK N+ + LGG
Sbjct: 131 QKGFLKETKENLALLEAQLGG 151
>10_08_0710 + 20070655-20070990,20071074-20071469
Length = 243
Score = 42.7 bits (96), Expect = 3e-04
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Frame = +1
Query: 235 KLRVFAMRFCPYAERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSP-KGTVPAL*YEPGK 411
+L++ + PY R L+ K + Y+ V +L K E + + +P VP L + GK
Sbjct: 10 ELKLLGLWASPYVLRAKFALSFKGLSYENVEEDLHNKSELLLSSNPVHKKVPVLIHN-GK 68
Query: 412 ALFDSNIINVYLDEKYPEI--PLQASDPLRRA 501
+ +S II Y+DE +P+ L SDP RA
Sbjct: 69 PICESQIIVEYVDEAFPDAGESLLPSDPYDRA 100
>10_08_0707 + 20037301-20037633,20037862-20038248
Length = 239
Score = 41.5 bits (93), Expect = 6e-04
Identities = 40/136 (29%), Positives = 63/136 (46%), Gaps = 14/136 (10%)
Frame = +1
Query: 265 PYAERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSP-KGTVPAL*YEPGKALFDSNIINV 441
P+ R L L K + Y+ V +L K E + +P +P L + GK + +S+II
Sbjct: 17 PFVTRVELALGLKGLSYEYVKQDLVNKSELLLASNPVHKKIPVLIHN-GKPVCESSIIVQ 75
Query: 442 YLDEKYPE----IPLQASDPLRRAQDKILV----ESFAPAQSAYY---TAAFNAQALEP- 585
Y+DE +P+ L +DP RA + V + F PA A + T A+ ++
Sbjct: 76 YIDEAFPDAGAGAALLPADPYERAVARFWVAYVDDKFVPAWVATFRGKTEEEKAEGMKQL 135
Query: 586 -SMVETYHKDLRDYKK 630
+ VET L+D K
Sbjct: 136 LAAVETLEGALKDCSK 151
>05_04_0304 - 20048518-20049003,20049074-20049412
Length = 274
Score = 41.5 bits (93), Expect = 6e-04
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Frame = +1
Query: 235 KLRVFAMRFCPYAERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSP-KGTVPAL*YEPGK 411
+L++F Y R L L K + + +L K E + +P VP L + G+
Sbjct: 12 ELKLFGSWASSYTHRVQLALRLKALEFVYAEEDLGNKSEALLRLNPVHKKVPVLVHR-GR 70
Query: 412 ALFDSNIINVYLDEKYPEI-PLQASDPLRRA 501
L +S II YLD+ +PE PL SDP RA
Sbjct: 71 PLAESVIILQYLDDAWPESRPLLPSDPFDRA 101
>11_02_0046 +
7711536-7711568,7711685-7711850,7712251-7712339,
7712443-7712514,7712807-7712860,7713000-7713075,
7713238-7713299,7713445-7713504,7713663-7713773
Length = 240
Score = 41.1 bits (92), Expect = 8e-04
Identities = 33/101 (32%), Positives = 44/101 (43%), Gaps = 3/101 (2%)
Frame = +1
Query: 208 GDVLPPYSGKLRVFAMRFCPYAERTVLTLNAKNIPYDLVFINL---DQKPEWIFNFSPKG 378
G P KL F C Y R L+L K + Y+ INL +Q +P
Sbjct: 18 GAAAPERRLKLYSFWRSSCSYRVRIALSL--KGLDYEYKPINLLANEQSHPEFEKLNPMK 75
Query: 379 TVPAL*YEPGKALFDSNIINVYLDEKYPEIPLQASDPLRRA 501
VPAL + DS I +YL++ YP+ PL DP +A
Sbjct: 76 YVPALVDGDDTVVVDSFAILLYLEDTYPQHPLLPQDPKMKA 116
>01_07_0182 + 41838805-41839152,41839230-41839610
Length = 242
Score = 41.1 bits (92), Expect = 8e-04
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +1
Query: 265 PYAERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSP-KGTVPAL*YEPGKALFDSNIINV 441
P+ R L K + Y+L+ +L+ K + +P VP L + G+A+ +S +I
Sbjct: 14 PFVHRVEAALQLKGVAYELIHEDLENKSNLLLASNPVHKKVPVL-LDGGRAICESLVIVE 72
Query: 442 YLDEKYPEIPLQASDPLRRA 501
Y+D+ + P+ +DP RA
Sbjct: 73 YVDDAFDGPPILPADPYDRA 92
>01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443
Length = 221
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Frame = +1
Query: 235 KLRVFAMRFCPYAERTVLTLNAKNIPYDLVFINL---DQKPEWIFNFSPKGTVPAL*YEP 405
KLRV+ M R LN K + +DLV ++L K +P G +P L +
Sbjct: 7 KLRVYGMALSANVVRVATVLNEKGLDFDLVPVDLRTAAHKQPHFLALNPFGQIPVL-QDG 65
Query: 406 GKALFDSNIINVYLDEKY 459
+ L++S IN Y+ KY
Sbjct: 66 DEVLYESRAINRYIATKY 83
>01_07_0184 + 41846416-41847132
Length = 238
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Frame = +1
Query: 223 PYSGKLRVFAMRFCPYAERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSP-KGTVPAL*Y 399
P ++V PY++R L K +PY+L+ +L K + + +P VP L +
Sbjct: 4 PAPAPVKVIGTFDSPYSQRAEAALRLKGVPYELILEDLRNKSDLLLTHNPIHKKVPVLLH 63
Query: 400 ---EPGKALFDSNIINVYLDEKYP-EIPLQASDPLRRA 501
+ A+ +S +I Y+DE +P + L +DP RA
Sbjct: 64 GDDDHRAAVCESLVIVEYVDEAFPAPLLLLPADPGLRA 101
>10_08_0715 + 20084586-20084912,20085030-20085416
Length = 237
Score = 39.5 bits (88), Expect = 0.002
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Frame = +1
Query: 235 KLRVFAMRFCPYAERTVLTLNAKNIPYDLVFINL-DQKPEWIFNFSP-KGTVPAL*YEPG 408
+L++ PY R L L+ K + YD V ++ K E + + +P VP L + G
Sbjct: 6 ELKLLGFWASPYVCRVKLALHLKGLIYDYVKEDVFTNKSELLLSCNPVHAKVPVLIHN-G 64
Query: 409 KALFDSNIINVYLDEKYPE--IPLQASDPLRRA 501
K + +S +I Y+DE +P+ + L +DP RA
Sbjct: 65 KPICESQVIVQYIDEVFPDAGVTLLPADPHDRA 97
>10_08_0714 + 20081801-20082130,20082205-20082597
Length = 240
Score = 39.5 bits (88), Expect = 0.002
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Frame = +1
Query: 232 GKLRVFAMRFCPYAERTVLTLNAKNIPYDLVFI--NLDQKPEWIFNFSP-KGTVPAL*YE 402
G+L++ PY R L L+ K + Y+ V + + K E + + +P VP + +
Sbjct: 5 GELKLLGTWASPYVSRVKLALHLKGLSYEYVVEEDHFNNKSELLLSSNPVHKKVPVMIHN 64
Query: 403 PGKALFDSNIINVYLDEKYPE--IPLQASDPLRRA 501
GK + +S II YLDE +P+ PL +D RA
Sbjct: 65 -GKPICESLIIMEYLDEAFPDTAAPLLPADLHDRA 98
>02_04_0267 -
21430370-21430474,21430559-21430618,21430937-21431046,
21431220-21431295,21431541-21431594,21431935-21432006,
21432088-21432173,21432694-21432750,21432886-21432991
Length = 241
Score = 39.5 bits (88), Expect = 0.002
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Frame = +1
Query: 235 KLRVFAMRFCPYAERTVLTLNAKNIPYDLVFINL----DQKPEWIFNFSPKGTVPAL*YE 402
KL +++ + R + LN K + Y+ +NL PE++ +P VPAL +
Sbjct: 13 KLGLYSYWRSSCSHRVRIALNLKGLEYEYKAVNLLKGEHSDPEFM-KVNPMKFVPAL-VD 70
Query: 403 PGKALFDSNIINVYLDEKYPEIPLQASD 486
+ DS I +YL++KYPE PL D
Sbjct: 71 GDAVIGDSYAIALYLEDKYPEHPLLPQD 98
>12_01_0675 +
5759641-5759722,5760247-5760291,5760690-5760775,
5760888-5760959,5761210-5761263,5761385-5761460,
5761778-5761839,5762174-5762233,5762331-5762432
Length = 212
Score = 35.5 bits (78), Expect = 0.040
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 4/109 (3%)
Frame = +1
Query: 271 AERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSPKGTVPAL*YEPGKALFDSNIINVYLD 450
+ R + LN K + Y+ +N P++ +P +PAL + + DS I +YL+
Sbjct: 17 SHRIRIVLNLKGVDYEYKSVNPRTDPDYE-KINPIKYIPAL-VDGDLVVSDSLAIALYLE 74
Query: 451 EKYPEIPLQASDPLRRAQD----KILVESFAPAQSAYYTAAFNAQALEP 585
+KYP+ L D ++A + I+ S P Q Y + L P
Sbjct: 75 DKYPQHALLPKDLKKKALNLQIANIVCSSIQPLQ-GYAVIGLHEGKLSP 122
>03_02_0591 -
9682476-9682487,9682805-9682885,9683085-9683192,
9683307-9683383,9683495-9683603,9683696-9683794,
9684208-9684294,9684454-9684514,9684646-9684720,
9684826-9684854
Length = 245
Score = 35.1 bits (77), Expect = 0.053
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = +1
Query: 220 PPYSGKLRVFAMRFCPYAERTVLTLNAKNI--PYDLVFINLDQKPEWI-FNFSPKGTVPA 390
P + G R++ CPYA+R + N K + +V I+L +P W P+ VP+
Sbjct: 28 PLFDGTTRLYVAYHCPYAQRAWIARNYKGLQDKIKIVAIDLADRPAWYKEKVYPENKVPS 87
Query: 391 L 393
L
Sbjct: 88 L 88
>12_01_0674 +
5755523-5755613,5756325-5756366,5756830-5756915,
5757008-5757079,5757450-5757525,5757765-5757826,
5758119-5758178,5758293-5758394
Length = 196
Score = 34.7 bits (76), Expect = 0.070
Identities = 27/83 (32%), Positives = 41/83 (49%)
Frame = +1
Query: 253 MRFCPYAERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSPKGTVPAL*YEPGKALFDSNI 432
M C Y R + LN K I Y+ + P++ +P VPAL + + DS
Sbjct: 16 MSSCSYRVR--IALNLKGIDYEYRAVTRGD-PDY-GKINPIKYVPAL-VDGDFTISDSLA 70
Query: 433 INVYLDEKYPEIPLQASDPLRRA 501
I +YL++KYP+ PL D ++A
Sbjct: 71 IILYLEDKYPQHPLLPQDLKKKA 93
>07_03_0313 + 16620817-16621515
Length = 232
Score = 34.7 bits (76), Expect = 0.070
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 9/100 (9%)
Frame = +1
Query: 232 GKLRVFAMRFCPYAERTVLTLNAKNIPYDLVFINL-DQKPEWIFNFSP-KGTVPAL*YEP 405
G+L + P+ +R + L K +PYD L K + + +P VP L +
Sbjct: 4 GELVLLDFWASPFGQRCRIALAEKKLPYDYSEQELLGAKSDLLLRSNPIHAKVPVLLHGD 63
Query: 406 G--KALFDSNIINVYLDEKYPE-----IPLQASDPLRRAQ 504
G +A+ +S I YLD+ +P+ +P A DP RA+
Sbjct: 64 GDGRAVCESLAILEYLDDAFPDATPRLLPSAADDPYARAR 103
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,093,374
Number of Sequences: 37544
Number of extensions: 292458
Number of successful extensions: 650
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 646
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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