Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0616
(687 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical pr... 106 1e-23
AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical ... 103 9e-23
L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical pr... 101 4e-22
L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical pr... 101 4e-22
L23651-11|AAA27959.1| 250|Caenorhabditis elegans Hypothetical p... 87 1e-17
L16622-2|ABB51199.1| 246|Caenorhabditis elegans Hypothetical pr... 80 1e-15
AF025462-4|AAN72424.1| 123|Caenorhabditis elegans Hypothetical ... 45 6e-05
Z66560-1|CAA91449.1| 214|Caenorhabditis elegans Hypothetical pr... 42 5e-04
AC006804-5|AAF60754.1| 213|Caenorhabditis elegans Hypothetical ... 38 0.009
Z72502-11|CAH19081.1| 484|Caenorhabditis elegans Hypothetical p... 30 1.3
Z72502-10|CAA96587.1| 447|Caenorhabditis elegans Hypothetical p... 30 1.3
AC024200-13|AAF36004.1| 214|Caenorhabditis elegans Glutathione ... 29 2.4
AF039052-7|AAO91672.2| 462|Caenorhabditis elegans Hypothetical ... 28 7.2
AF039052-6|AAF98635.2| 534|Caenorhabditis elegans Hypothetical ... 28 7.2
>Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical
protein F13A7.10 protein.
Length = 254
Score = 106 bits (255), Expect = 1e-23
Identities = 57/171 (33%), Positives = 93/171 (54%), Gaps = 3/171 (1%)
Frame = +1
Query: 184 MSEKHLQTGDVLPPYSGK--LRVFAMRFCPYAERTVLTLNAKNIPYDLVFINLDQKPEWI 357
++ K L+TGD+ PP R+++MRFCP A+R ++ + K IP +++ INL QKP+W
Sbjct: 7 INSKALKTGDLPPPSPSPNTFRIYSMRFCPAAQRALIYASVKKIPSEVININLQQKPDWY 66
Query: 358 FNFSPKGTVPAL*YEPGKAL-FDSNIINVYLDEKYPEIPLQASDPLRRAQDKILVESFAP 534
F + KG VP L + GK L +S +I YLD+ +PE + SDP + Q K+L+E +
Sbjct: 67 FTKNYKGQVPTLEHAEGKKLVIESAVIPEYLDDIFPETKILPSDPYEKVQQKLLLERLSD 126
Query: 535 AQSAYYTAAFNAQALEPSMVETYHKDLRDYKKSLKRAVLNIYMGTSLGGSI 687
+ + F A + E + L+ ++++ Y GTS G +
Sbjct: 127 QLTPAFGRVFRAIKNPEELKEKFESILKAFEEAESLLEGAFYSGTSSPGFV 177
>AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical
protein K10F12.4a protein.
Length = 309
Score = 103 bits (248), Expect = 9e-23
Identities = 58/151 (38%), Positives = 87/151 (57%), Gaps = 4/151 (2%)
Frame = +1
Query: 199 LQTGDVLPPYS-GKLRVFAMRFCPYAERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSPK 375
L G + PP + G R+++MRFCPYA+R ++ L KNIP ++V +N D+ P W SP
Sbjct: 85 LHPGSIEPPLTPGNYRLYSMRFCPYAQRVLIYLAKKNIPVEVVNVNPDRSPNWYLPKSPI 144
Query: 376 GTVPAL*YEPGKALFDSNIINVYLDEKYPEIPLQASDPLRRAQDKILVESFAPAQSA--- 546
G VPAL GK +++SN+I YLDE +P + D +A KILVE +P +A
Sbjct: 145 GRVPALEIN-GKVVWESNVIVEYLDELFPTNTILPRDAYEKAHQKILVERLSPIMNALFE 203
Query: 547 YYTAAFNAQALEPSMVETYHKDLRDYKKSLK 639
+Y ++ N QA + + H LR+ + L+
Sbjct: 204 FYGSSNNPQAQRQNDMNV-HSALRNSENLLR 233
>L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical
protein C02D5.3c protein.
Length = 254
Score = 101 bits (243), Expect = 4e-22
Identities = 54/171 (31%), Positives = 95/171 (55%), Gaps = 3/171 (1%)
Frame = +1
Query: 184 MSEKHLQTGDVLP--PYSGKLRVFAMRFCPYAERTVLTLNAKNIPYDLVFINLDQKPEWI 357
++ K ++ GD P P SG +R++ MR+CP+A+R ++ + K IP +++ I+LDQKP+W
Sbjct: 7 LNTKVVKNGDPAPAPPASGTIRIYNMRYCPWAQRALIFASLKKIPTEVINIHLDQKPDWF 66
Query: 358 FNFSPKGTVPAL*YEPGKAL-FDSNIINVYLDEKYPEIPLQASDPLRRAQDKILVESFAP 534
F KG VPAL ++ GK + +S +I YLD+ YPE + +D + Q K+L++ +
Sbjct: 67 FTKHYKGQVPALEHDEGKKIVIESAVIPEYLDDIYPEPRIIPTDHYEKVQQKLLLDRISG 126
Query: 535 AQSAYYTAAFNAQALEPSMVETYHKDLRDYKKSLKRAVLNIYMGTSLGGSI 687
S+ + A + + E + + Y + + + Y GTS G +
Sbjct: 127 QLSSAFYGVVQAAKISDLLKEKLVELAKAYDTAEELLTGDFYSGTSKPGFV 177
>L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical
protein C02D5.3a protein.
Length = 537
Score = 101 bits (243), Expect = 4e-22
Identities = 54/171 (31%), Positives = 95/171 (55%), Gaps = 3/171 (1%)
Frame = +1
Query: 184 MSEKHLQTGDVLP--PYSGKLRVFAMRFCPYAERTVLTLNAKNIPYDLVFINLDQKPEWI 357
++ K ++ GD P P SG +R++ MR+CP+A+R ++ + K IP +++ I+LDQKP+W
Sbjct: 290 LNTKVVKNGDPAPAPPASGTIRIYNMRYCPWAQRALIFASLKKIPTEVINIHLDQKPDWF 349
Query: 358 FNFSPKGTVPAL*YEPGKAL-FDSNIINVYLDEKYPEIPLQASDPLRRAQDKILVESFAP 534
F KG VPAL ++ GK + +S +I YLD+ YPE + +D + Q K+L++ +
Sbjct: 350 FTKHYKGQVPALEHDEGKKIVIESAVIPEYLDDIYPEPRIIPTDHYEKVQQKLLLDRISG 409
Query: 535 AQSAYYTAAFNAQALEPSMVETYHKDLRDYKKSLKRAVLNIYMGTSLGGSI 687
S+ + A + + E + + Y + + + Y GTS G +
Sbjct: 410 QLSSAFYGVVQAAKISDLLKEKLVELAKAYDTAEELLTGDFYSGTSKPGFV 460
Score = 80.2 bits (189), Expect = 1e-15
Identities = 44/143 (30%), Positives = 76/143 (53%), Gaps = 2/143 (1%)
Frame = +1
Query: 265 PYAERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSPKGTVPAL*YEPGKA-LFDSNIINV 441
P A+R ++ + KNIP D++ ++L +KP+W F+ KG VP L ++ GK + +S +I
Sbjct: 28 PVAQRALIYASVKNIPSDVINVHLQEKPDWYFSKHYKGQVPTLEHDEGKKHVIESAVIPE 87
Query: 442 YLDEKYPEIPLQASDPLRRAQDKILVESFAPAQSAYYTAAFNAQALEPSMVETYHKDLRD 621
YLD+ YPE + +DP + Q K+L++ + S + A P + E D++
Sbjct: 88 YLDDIYPETRILPTDPYEKVQQKLLLDRISGQVSPAFYGVVQA-VKNPDLREEKFADIKK 146
Query: 622 -YKKSLKRAVLNIYMGTSLGGSI 687
Y + + + Y GTS G +
Sbjct: 147 AYDNAEQLLTGDFYSGTSKPGFV 169
>L23651-11|AAA27959.1| 250|Caenorhabditis elegans Hypothetical
protein C29E4.7 protein.
Length = 250
Score = 87.0 bits (206), Expect = 1e-17
Identities = 43/114 (37%), Positives = 68/114 (59%), Gaps = 1/114 (0%)
Frame = +1
Query: 184 MSEKHLQTGDVLPPYS-GKLRVFAMRFCPYAERTVLTLNAKNIPYDLVFINLDQKPEWIF 360
++ K ++ GD PP S G RV+ MRFCP+AER +L + AK I ++V +N+ K EW +
Sbjct: 6 VTSKAIRKGDAEPPLSKGSFRVYNMRFCPWAERAMLYVAAKGIEAEVVNLNVTDKLEWYW 65
Query: 361 NFSPKGTVPAL*YEPGKALFDSNIINVYLDEKYPEIPLQASDPLRRAQDKILVE 522
+G PA+ + GK + +S I YLD+ +PE + +DP + Q K+L +
Sbjct: 66 TKHYQGKAPAVEHN-GKVVIESGFIPEYLDDAFPETRILPTDPYEKVQQKLLAD 118
>L16622-2|ABB51199.1| 246|Caenorhabditis elegans Hypothetical
protein C02D5.3b protein.
Length = 246
Score = 80.2 bits (189), Expect = 1e-15
Identities = 44/143 (30%), Positives = 76/143 (53%), Gaps = 2/143 (1%)
Frame = +1
Query: 265 PYAERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSPKGTVPAL*YEPGKA-LFDSNIINV 441
P A+R ++ + KNIP D++ ++L +KP+W F+ KG VP L ++ GK + +S +I
Sbjct: 28 PVAQRALIYASVKNIPSDVINVHLQEKPDWYFSKHYKGQVPTLEHDEGKKHVIESAVIPE 87
Query: 442 YLDEKYPEIPLQASDPLRRAQDKILVESFAPAQSAYYTAAFNAQALEPSMVETYHKDLRD 621
YLD+ YPE + +DP + Q K+L++ + S + A P + E D++
Sbjct: 88 YLDDIYPETRILPTDPYEKVQQKLLLDRISGQVSPAFYGVVQA-VKNPDLREEKFADIKK 146
Query: 622 -YKKSLKRAVLNIYMGTSLGGSI 687
Y + + + Y GTS G +
Sbjct: 147 AYDNAEQLLTGDFYSGTSKPGFV 169
>AF025462-4|AAN72424.1| 123|Caenorhabditis elegans Hypothetical
protein K10F12.4b protein.
Length = 123
Score = 44.8 bits (101), Expect = 6e-05
Identities = 19/39 (48%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +1
Query: 199 LQTGDVLPPYS-GKLRVFAMRFCPYAERTVLTLNAKNIP 312
L G + PP + G R+++MRFCPYA+R ++ L KNIP
Sbjct: 85 LHPGSIEPPLTPGNYRLYSMRFCPYAQRVLIYLAKKNIP 123
>Z66560-1|CAA91449.1| 214|Caenorhabditis elegans Hypothetical
protein D1053.1 protein.
Length = 214
Score = 41.5 bits (93), Expect = 5e-04
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Frame = +1
Query: 262 CPYAERTVLTLNAKNIPYDLVFINL--DQKPEWIFNFSPKGTVPAL*YEPGKALFDSNII 435
C + R L L KN+ Y+ ++L ++ + +P VP + G+ + +S I
Sbjct: 16 CSWRVRIALAL--KNVDYEYKTVDLLSEEAKSKLKEINPAAKVPTFVVD-GQVITESLAI 72
Query: 436 NVYLDEKYPEIPLQASDPLRRAQDKIL 516
YL+E +P++PL DP++RA + +
Sbjct: 73 IEYLEETHPDVPLLPKDPIKRAHARAI 99
>AC006804-5|AAF60754.1| 213|Caenorhabditis elegans Hypothetical
protein Y53G8B.1 protein.
Length = 213
Score = 37.5 bits (83), Expect = 0.009
Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = +1
Query: 262 CPYAERTVLTLNAKNIPYDLVFINL--DQKPEWIFNFSPKGTVPAL*YEPGKALFDSNII 435
C RT L L K I Y+ +NL QK + +P VP L G L +S I
Sbjct: 15 CSSRVRTALAL--KKIDYEYQPVNLLNKQKEQEFHGNNPAEKVPILKIN-GLTLTESMAI 71
Query: 436 NVYLDEKYPEIPLQASDPLRRAQDKIL 516
YLDE YP+ PL +P +A+ + +
Sbjct: 72 IEYLDEIYPDPPLLPKEPELKARARAI 98
>Z72502-11|CAH19081.1| 484|Caenorhabditis elegans Hypothetical
protein C08B6.4b protein.
Length = 484
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Frame = +1
Query: 220 PPYSGKLRVFAMRFCPYAERTV---LTLNAKN--IPYDLVFINLDQKPEW 354
P S +++ F FC Y + TL+ KN +P D +F NL +P+W
Sbjct: 370 PGESRRIKAFKW-FCGYFDTPTGPEATLSCKNMPVPLDQIFYNLSYQPDW 418
>Z72502-10|CAA96587.1| 447|Caenorhabditis elegans Hypothetical
protein C08B6.4a protein.
Length = 447
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Frame = +1
Query: 220 PPYSGKLRVFAMRFCPYAERTV---LTLNAKN--IPYDLVFINLDQKPEW 354
P S +++ F FC Y + TL+ KN +P D +F NL +P+W
Sbjct: 333 PGESRRIKAFKW-FCGYFDTPTGPEATLSCKNMPVPLDQIFYNLSYQPDW 381
>AC024200-13|AAF36004.1| 214|Caenorhabditis elegans Glutathione
s-transferase protein43 protein.
Length = 214
Score = 29.5 bits (63), Expect = 2.4
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 8/99 (8%)
Frame = +1
Query: 271 AERTVLTLNAKNIPYDLVFINL---DQKPEWIF-NFSPKGTVPAL*YEPGKALFDSNIIN 438
A R + L KNI Y+ I+L + K F +P VP L G +L +S I
Sbjct: 15 AWRVRIALALKNIDYEYRPIDLFSEESKNNAEFVKHNPAKKVPTLVIN-GLSLTESLAII 73
Query: 439 VYLDEKYPEIPLQASDPLRRAQDKI----LVESFAPAQS 543
YLDE YP+ P + +R+ + +V S P Q+
Sbjct: 74 EYLDEAYPDPPFLPKELDKRSYSRAIALHIVASIQPLQA 112
>AF039052-7|AAO91672.2| 462|Caenorhabditis elegans Hypothetical
protein T22D1.3b protein.
Length = 462
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 442 YLDEKYPEIPLQASDPLRRAQDKILVESFA 531
Y+ EK+P + + A + + RAQ K+L++ A
Sbjct: 307 YIKEKHPHVQVIAGNVVTRAQAKLLIDQGA 336
>AF039052-6|AAF98635.2| 534|Caenorhabditis elegans Hypothetical
protein T22D1.3a protein.
Length = 534
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 442 YLDEKYPEIPLQASDPLRRAQDKILVESFA 531
Y+ EK+P + + A + + RAQ K+L++ A
Sbjct: 307 YIKEKHPHVQVIAGNVVTRAQAKLLIDQGA 336
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,502,674
Number of Sequences: 27780
Number of extensions: 286273
Number of successful extensions: 732
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 725
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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