Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0615
         (673 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   2.9  
Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protei...    23   6.6  
AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    23   8.8  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -2

Query: 363 FKY*IPFFSYRPCVLQ*VVHSSL 295
           F +  PFFS+ PC L      SL
Sbjct: 66  FSFSFPFFSFAPCTLASATEISL 88


>Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protein
           precursor protein.
          Length = 260

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 595 WYWQDVKFDLIYNYVSTQPFVS 660
           WYW+D + D +Y +V    F +
Sbjct: 200 WYWKDGQMD-VYYFVCNYSFTN 220


>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 183 KVLEGPAPENVEKP 224
           KV+E P P  VEKP
Sbjct: 218 KVIEKPVPYTVEKP 231


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 613,467
Number of Sequences: 2352
Number of extensions: 11334
Number of successful extensions: 52
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)