Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0615
         (673 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L77701-1|AAA98114.1|   63|Homo sapiens COX17 protein.                  91   3e-18
BC108317-1|AAI08318.1|   63|Homo sapiens COX17 cytochrome c oxid...    91   3e-18
BC105280-1|AAI05281.1|   63|Homo sapiens COX17 cytochrome c oxid...    91   3e-18
BC010933-1|AAH10933.1|   63|Homo sapiens COX17 cytochrome c oxid...    91   3e-18
AF269244-1|AAF82569.1|   63|Homo sapiens COX17 protein.                91   3e-18
AL138686-3|CAH71087.1|   63|Homo sapiens protein ( Human DNA seq...    89   1e-17
BC043367-1|AAH43367.1|  350|Homo sapiens family with sequence si...    30   6.6  
AL139339-3|CAH71485.1|  344|Homo sapiens family with sequence si...    30   6.6  

>L77701-1|AAA98114.1|   63|Homo sapiens COX17 protein.
          Length = 63

 Score = 91.5 bits (217), Expect = 3e-18
 Identities = 38/52 (73%), Positives = 43/52 (82%)
 Frame = +3

Query: 204 PENVEKPKLKPCCACPETKRARDACIIKNGEENCGPLIEEHKACMRKMGFNI 359
           PE+ EK  LKPCCACPETK+ARDACII+ GEE+CG LIE HK CMR +GF I
Sbjct: 12  PESQEKKPLKPCCACPETKKARDACIIEKGEEHCGHLIEAHKECMRALGFKI 63


>BC108317-1|AAI08318.1|   63|Homo sapiens COX17 cytochrome c oxidase
           assembly homolog (S. cerevisiae) protein.
          Length = 63

 Score = 91.5 bits (217), Expect = 3e-18
 Identities = 38/52 (73%), Positives = 43/52 (82%)
 Frame = +3

Query: 204 PENVEKPKLKPCCACPETKRARDACIIKNGEENCGPLIEEHKACMRKMGFNI 359
           PE+ EK  LKPCCACPETK+ARDACII+ GEE+CG LIE HK CMR +GF I
Sbjct: 12  PESQEKKPLKPCCACPETKKARDACIIEKGEEHCGHLIEAHKECMRALGFKI 63


>BC105280-1|AAI05281.1|   63|Homo sapiens COX17 cytochrome c oxidase
           assembly homolog (S. cerevisiae) protein.
          Length = 63

 Score = 91.5 bits (217), Expect = 3e-18
 Identities = 38/52 (73%), Positives = 43/52 (82%)
 Frame = +3

Query: 204 PENVEKPKLKPCCACPETKRARDACIIKNGEENCGPLIEEHKACMRKMGFNI 359
           PE+ EK  LKPCCACPETK+ARDACII+ GEE+CG LIE HK CMR +GF I
Sbjct: 12  PESQEKKPLKPCCACPETKKARDACIIEKGEEHCGHLIEAHKECMRALGFKI 63


>BC010933-1|AAH10933.1|   63|Homo sapiens COX17 cytochrome c oxidase
           assembly homolog (S. cerevisiae) protein.
          Length = 63

 Score = 91.5 bits (217), Expect = 3e-18
 Identities = 38/52 (73%), Positives = 43/52 (82%)
 Frame = +3

Query: 204 PENVEKPKLKPCCACPETKRARDACIIKNGEENCGPLIEEHKACMRKMGFNI 359
           PE+ EK  LKPCCACPETK+ARDACII+ GEE+CG LIE HK CMR +GF I
Sbjct: 12  PESQEKKPLKPCCACPETKKARDACIIEKGEEHCGHLIEAHKECMRALGFKI 63


>AF269244-1|AAF82569.1|   63|Homo sapiens COX17 protein.
          Length = 63

 Score = 91.5 bits (217), Expect = 3e-18
 Identities = 38/52 (73%), Positives = 43/52 (82%)
 Frame = +3

Query: 204 PENVEKPKLKPCCACPETKRARDACIIKNGEENCGPLIEEHKACMRKMGFNI 359
           PE+ EK  LKPCCACPETK+ARDACII+ GEE+CG LIE HK CMR +GF I
Sbjct: 12  PESQEKKPLKPCCACPETKKARDACIIEKGEEHCGHLIEAHKECMRALGFKI 63


>AL138686-3|CAH71087.1|   63|Homo sapiens protein ( Human DNA
           sequence from clone RP11-189B4 on chromosome
           13q14.11-14.3Contains a protein phosphatase 1 regulatory
           (inhibitor) subunit 2  ).
          Length = 63

 Score = 89.4 bits (212), Expect = 1e-17
 Identities = 37/52 (71%), Positives = 42/52 (80%)
 Frame = +3

Query: 204 PENVEKPKLKPCCACPETKRARDACIIKNGEENCGPLIEEHKACMRKMGFNI 359
           PE+ EK  LKPCC CPETK+ARDACII+ GEE+CG LIE HK CMR +GF I
Sbjct: 12  PESQEKRPLKPCCTCPETKKARDACIIEKGEEHCGHLIEAHKECMRALGFKI 63


>BC043367-1|AAH43367.1|  350|Homo sapiens family with sequence
           similarity 26, member A protein.
          Length = 350

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = -1

Query: 85  YNFLYGLVIYLTPSLSQFMC 26
           YN LYGL + LTP L+ F+C
Sbjct: 47  YNALYGLGLLLTPPLALFLC 66


>AL139339-3|CAH71485.1|  344|Homo sapiens family with sequence
           similarity 26, member A protein.
          Length = 344

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = -1

Query: 85  YNFLYGLVIYLTPSLSQFMC 26
           YN LYGL + LTP L+ F+C
Sbjct: 47  YNALYGLGLLLTPPLALFLC 66


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,828,904
Number of Sequences: 237096
Number of extensions: 1473241
Number of successful extensions: 6591
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6591
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)