Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0614
         (642 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146747-1|AAO12062.1|  288|Anopheles gambiae odorant-binding pr...    23   6.2  
AJ618931-1|CAF02009.1|  288|Anopheles gambiae odorant-binding pr...    23   6.2  
AY146746-1|AAO12061.1|  333|Anopheles gambiae odorant-binding pr...    23   8.2  

>AY146747-1|AAO12062.1|  288|Anopheles gambiae odorant-binding
           protein AgamOBP42 protein.
          Length = 288

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +3

Query: 132 CSPLIIAHRGASGYVPEHTLGSYALSITMGADY 230
           C  LI+    + G + EH L  Y +  T  +DY
Sbjct: 71  CVGLILQWWKSDGTLNEHVLAQYFMPDTSDSDY 103


>AJ618931-1|CAF02009.1|  288|Anopheles gambiae odorant-binding
           protein OBPjj83d protein.
          Length = 288

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +3

Query: 132 CSPLIIAHRGASGYVPEHTLGSYALSITMGADY 230
           C  LI+    + G + EH L  Y +  T  +DY
Sbjct: 71  CVGLILQWWKSDGTLNEHVLAQYFMPDTSDSDY 103


>AY146746-1|AAO12061.1|  333|Anopheles gambiae odorant-binding
           protein AgamOBP43 protein.
          Length = 333

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +2

Query: 155 PRSQRICPRTHPRFLCSQYNHG 220
           P    +C R H  FLC   ++G
Sbjct: 127 PSVTDVCERAHRSFLCYHQHYG 148


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 698,681
Number of Sequences: 2352
Number of extensions: 15118
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)