Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0614
(642 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF125960-1|AAD14735.1| 356|Caenorhabditis elegans Hypothetical ... 63 1e-10
Z78198-2|CAB01567.1| 296|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z47812-12|CAE48507.1| 719|Caenorhabditis elegans Hypothetical p... 36 0.033
Z47812-11|CAA87796.1| 796|Caenorhabditis elegans Hypothetical p... 36 0.033
Z47811-6|CAE48505.1| 719|Caenorhabditis elegans Hypothetical pr... 36 0.033
Z47811-5|CAA87788.1| 796|Caenorhabditis elegans Hypothetical pr... 36 0.033
Z81127-1|CAB03386.1| 325|Caenorhabditis elegans Hypothetical pr... 35 0.043
U49941-2|AAB53873.1| 757|Caenorhabditis elegans Hypothetical pr... 35 0.043
Z47070-2|CAA87343.2| 340|Caenorhabditis elegans Hypothetical pr... 34 0.075
U00064-3|AAB52706.2| 375|Caenorhabditis elegans Hypothetical pr... 34 0.099
Z78540-4|CAB01734.2| 624|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z81066-3|CAI46608.1| 363|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z71185-14|CAA94912.1| 591|Caenorhabditis elegans Hypothetical p... 28 6.5
AL021475-4|CAA16315.1| 591|Caenorhabditis elegans Hypothetical ... 28 6.5
AC024772-1|AAF60536.2| 242|Caenorhabditis elegans Hypothetical ... 27 8.6
>AF125960-1|AAD14735.1| 356|Caenorhabditis elegans Hypothetical
protein T12B3.3 protein.
Length = 356
Score = 63.3 bits (147), Expect = 1e-10
Identities = 46/138 (33%), Positives = 71/138 (51%)
Frame = +3
Query: 33 GLLVLSFSTVGITFGIPVNENLDFNSEFLNSDFCSPLIIAHRGASGYVPEHTLGSYALSI 212
GLL++ S ++ +N +S+ +++ F I HRGA PE+++ +A +
Sbjct: 31 GLLLIPLSLFIFSY---TTKNEKCSSKNVDTFFSGFKIGGHRGAPKSFPENSMAGFAQAK 87
Query: 213 TMGADYIEPDLVMTKDGVLVARHDNELSLTTDVASRIEFATRNRTQTVDGSAITGWFTED 392
GAD IE D+ +TKDG V HD++L TTD+ I TR D SA T T
Sbjct: 88 ADGADLIEFDVALTKDGKAVLMHDDDLDRTTDMKGPIRDKTRAELDRCDISA-TFKRTAP 146
Query: 393 FTLAEIKTLRARERIPDI 446
+ T+ +RER+PD+
Sbjct: 147 GDHCRLATV-SRERVPDM 163
>Z78198-2|CAB01567.1| 296|Caenorhabditis elegans Hypothetical
protein F55C5.2 protein.
Length = 296
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/75 (29%), Positives = 39/75 (52%)
Frame = +3
Query: 153 HRGASGYVPEHTLGSYALSITMGADYIEPDLVMTKDGVLVARHDNELSLTTDVASRIEFA 332
HRG+ PE+T+ S + G D +E D+ M+ DGV + HD+ T + ++E +
Sbjct: 36 HRGSPKRAPENTIESLKKAKEDGCDLVEFDIHMSSDGVPLLMHDDTTERTGNAKLKVEHS 95
Query: 333 TRNRTQTVDGSAITG 377
T + + V + + G
Sbjct: 96 TWQQLEAVVLNPVNG 110
>Z47812-12|CAE48507.1| 719|Caenorhabditis elegans Hypothetical
protein T05H10.7b protein.
Length = 719
Score = 35.5 bits (78), Expect = 0.033
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 12/70 (17%)
Frame = +3
Query: 111 EFLNSDFC------SPLIIAHRGA-SGYVP-----EHTLGSYALSITMGADYIEPDLVMT 254
+F++ +C + L + HRGA + Y E+T+ S + GADY+E D+ +T
Sbjct: 309 QFMDQTYCRHWKKRNALEVGHRGAGNSYTKFAMARENTIHSLNTAAKNGADYVEFDVQLT 368
Query: 255 KDGVLVARHD 284
KD + V HD
Sbjct: 369 KDRIAVIYHD 378
>Z47812-11|CAA87796.1| 796|Caenorhabditis elegans Hypothetical
protein T05H10.7a protein.
Length = 796
Score = 35.5 bits (78), Expect = 0.033
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 12/70 (17%)
Frame = +3
Query: 111 EFLNSDFC------SPLIIAHRGA-SGYVP-----EHTLGSYALSITMGADYIEPDLVMT 254
+F++ +C + L + HRGA + Y E+T+ S + GADY+E D+ +T
Sbjct: 386 QFMDQTYCRHWKKRNALEVGHRGAGNSYTKFAMARENTIHSLNTAAKNGADYVEFDVQLT 445
Query: 255 KDGVLVARHD 284
KD + V HD
Sbjct: 446 KDRIAVIYHD 455
>Z47811-6|CAE48505.1| 719|Caenorhabditis elegans Hypothetical
protein T05H10.7b protein.
Length = 719
Score = 35.5 bits (78), Expect = 0.033
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 12/70 (17%)
Frame = +3
Query: 111 EFLNSDFC------SPLIIAHRGA-SGYVP-----EHTLGSYALSITMGADYIEPDLVMT 254
+F++ +C + L + HRGA + Y E+T+ S + GADY+E D+ +T
Sbjct: 309 QFMDQTYCRHWKKRNALEVGHRGAGNSYTKFAMARENTIHSLNTAAKNGADYVEFDVQLT 368
Query: 255 KDGVLVARHD 284
KD + V HD
Sbjct: 369 KDRIAVIYHD 378
>Z47811-5|CAA87788.1| 796|Caenorhabditis elegans Hypothetical
protein T05H10.7a protein.
Length = 796
Score = 35.5 bits (78), Expect = 0.033
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 12/70 (17%)
Frame = +3
Query: 111 EFLNSDFC------SPLIIAHRGA-SGYVP-----EHTLGSYALSITMGADYIEPDLVMT 254
+F++ +C + L + HRGA + Y E+T+ S + GADY+E D+ +T
Sbjct: 386 QFMDQTYCRHWKKRNALEVGHRGAGNSYTKFAMARENTIHSLNTAAKNGADYVEFDVQLT 445
Query: 255 KDGVLVARHD 284
KD + V HD
Sbjct: 446 KDRIAVIYHD 455
>Z81127-1|CAB03386.1| 325|Caenorhabditis elegans Hypothetical
protein T22G5.1 protein.
Length = 325
Score = 35.1 bits (77), Expect = 0.043
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +3
Query: 36 LLVLSFSTVGITFGIPVNENLDFNSEFLNSDFCSPLIIA-HRG-ASGYVPEHTLGSYALS 209
+L+L+F + I + +E + F I HRG A +PE++L +++
Sbjct: 33 ILLLAFLPIAIMLAFFIFRIPQLINETHKTQFFDTWKIGGHRGSAHDNIPENSLEAFSAV 92
Query: 210 ITMGADYIEPDLVMTKDGVLVARHDNELSLTTDVASRI 323
+ G E D+ +T DGV V HD+ T V I
Sbjct: 93 KSEGGQLAEMDIQITMDGVPVICHDSNTVRVTGVDKEI 130
>U49941-2|AAB53873.1| 757|Caenorhabditis elegans Hypothetical
protein K10B3.6a protein.
Length = 757
Score = 35.1 bits (77), Expect = 0.043
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 6/99 (6%)
Frame = +3
Query: 141 LIIAHRG-ASGYVP-----EHTLGSYALSITMGADYIEPDLVMTKDGVLVARHDNELSLT 302
L I HRG S Y E+T+ S + GADY+E D+ +TKD V HD +
Sbjct: 412 LQIGHRGMGSSYTKNIGQRENTIFSLNEAARRGADYVEMDVQLTKDLKTVVYHD--FHVL 469
Query: 303 TDVASRIEFATRNRTQTVDGSAITGWFTEDFTLAEIKTL 419
VA R + + T + ++ +D TLA++ L
Sbjct: 470 VAVAGR-DSPSSTPTAAGENKSLHEIAIKDLTLAQLNLL 507
>Z47070-2|CAA87343.2| 340|Caenorhabditis elegans Hypothetical
protein T09B9.3 protein.
Length = 340
Score = 34.3 bits (75), Expect = 0.075
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Frame = +3
Query: 129 FCSPLIIAHRG-ASGYVPEHTLGSYALSITMGADYIEPDLVMTKDGVLVARHDNELSLTT 305
F + II+ RG A G V ++T+ ++ + GAD I D+ MTKDG+L+ + S+ T
Sbjct: 62 FNATSIISDRGEAHGSVHKNTIPAFRQAKQNGADTIVMDVRMTKDGMLIVLLPD--SVDT 119
Query: 306 DVASRI 323
D A+ I
Sbjct: 120 DNATYI 125
>U00064-3|AAB52706.2| 375|Caenorhabditis elegans Hypothetical
protein ZC155.4 protein.
Length = 375
Score = 33.9 bits (74), Expect = 0.099
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Frame = +3
Query: 72 FGIPVNENLDFNSEFLNSDFCSPLIIAHRG-ASGYVPEHTLGSYALSITMGADYIEPDLV 248
F IP N S+F F + I HRG A +PE++L +++ G E D+
Sbjct: 100 FRIPQLTNEPHKSQF----FSAWKIGGHRGSAHDDIPENSLEAFSAVKREGGQLAEMDIQ 155
Query: 249 MTKDGVLVARHDNELSLTTDVASRIEFATRNRTQ 350
+T DGV V HD T V + +T N T+
Sbjct: 156 ITLDGVPVICHDANTVRVTGVDK--DISTMNITE 187
>Z78540-4|CAB01734.2| 624|Caenorhabditis elegans Hypothetical
protein C33G3.6 protein.
Length = 624
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +2
Query: 284 QRTEFDNRRRKSY*IRYTQPDSNSGRICYHRLVHGRFYTGRNKNVTS*RTHTRYQSWQRT 463
+R + + +KSY Y Q NS + Y +G YT RN++V + +++ + + + T
Sbjct: 291 ERQQLEPEMQKSYNNDYRQSSINSHQDKYENSSNGINYTDRNQDVYNNKSYGQQEWLKNT 350
Query: 464 YGWHL 478
HL
Sbjct: 351 SSDHL 355
>Z81066-3|CAI46608.1| 363|Caenorhabditis elegans Hypothetical
protein F17B5.6 protein.
Length = 363
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = -2
Query: 395 KIFREPTGDSRSVHCLSPVACSEFNTTCDVGC-QTQFVVMSGHKYPVFRHY 246
K+ P S+S ++PVAC + T + C Q++F+V+ G + ++++
Sbjct: 120 KVASMPIEISKSARFVAPVACCYYQYTGLLTCDQSKFLVIDGMHFQSYKYF 170
>Z71185-14|CAA94912.1| 591|Caenorhabditis elegans Hypothetical
protein Y32F6B.2 protein.
Length = 591
Score = 27.9 bits (59), Expect = 6.5
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Frame = +3
Query: 36 LLVLSFSTVGITFGIPVN-ENLDFNSEFLN-SDFCSPLIIAHRGASGYVPEHTLGSYALS 209
L+V +T+G TFGIP L + + D + +I+A +G ++GS
Sbjct: 439 LMVWWANTIGETFGIPTEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSIGSNLFD 498
Query: 210 ITMGADYIEPDLVMTKDGVLVARHDNELSLTTD 308
+ +G P L+ GV + +S+T++
Sbjct: 499 VCVGLPI--PWLIHFAIGVFKSEPTQNISVTSN 529
>AL021475-4|CAA16315.1| 591|Caenorhabditis elegans Hypothetical
protein Y32F6B.2 protein.
Length = 591
Score = 27.9 bits (59), Expect = 6.5
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Frame = +3
Query: 36 LLVLSFSTVGITFGIPVN-ENLDFNSEFLN-SDFCSPLIIAHRGASGYVPEHTLGSYALS 209
L+V +T+G TFGIP L + + D + +I+A +G ++GS
Sbjct: 439 LMVWWANTIGETFGIPTEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSIGSNLFD 498
Query: 210 ITMGADYIEPDLVMTKDGVLVARHDNELSLTTD 308
+ +G P L+ GV + +S+T++
Sbjct: 499 VCVGLPI--PWLIHFAIGVFKSEPTQNISVTSN 529
>AC024772-1|AAF60536.2| 242|Caenorhabditis elegans Hypothetical
protein Y40C5A.1 protein.
Length = 242
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -1
Query: 264 PRLSSLPDQVRCNQLPWLY*EHKNLGCVRGHIRW 163
PR++S+PD V N +++ EH+ R H W
Sbjct: 209 PRVTSIPDYVTVNAPSYIFPEHR-YDIKREHYHW 241
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,393,098
Number of Sequences: 27780
Number of extensions: 333633
Number of successful extensions: 800
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 800
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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