Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0613
(687 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 327 5e-90
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 327 5e-90
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 327 5e-90
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 327 5e-90
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 327 5e-90
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 327 5e-90
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 326 9e-90
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 326 9e-90
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 326 9e-90
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 320 6e-88
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 305 2e-83
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 157 7e-39
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 151 3e-37
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 120 1e-27
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 103 1e-22
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 93 2e-19
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 76 3e-14
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 76 3e-14
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 48 6e-06
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 29 3.1
AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical... 29 4.1
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 27 9.5
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 327 bits (803), Expect = 5e-90
Identities = 151/161 (93%), Positives = 158/161 (98%)
Frame = +1
Query: 1 KLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGI 180
KLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GI
Sbjct: 216 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGI 275
Query: 181 HETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPE 360
HET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPE
Sbjct: 276 HETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 335
Query: 361 RKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 483
RKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 336 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 327 bits (803), Expect = 5e-90
Identities = 151/161 (93%), Positives = 158/161 (98%)
Frame = +1
Query: 1 KLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGI 180
KLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GI
Sbjct: 216 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGI 275
Query: 181 HETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPE 360
HET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPE
Sbjct: 276 HETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 335
Query: 361 RKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 483
RKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 336 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 327 bits (803), Expect = 5e-90
Identities = 151/161 (93%), Positives = 158/161 (98%)
Frame = +1
Query: 1 KLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGI 180
KLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GI
Sbjct: 216 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGI 275
Query: 181 HETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPE 360
HET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPE
Sbjct: 276 HETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 335
Query: 361 RKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 483
RKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 336 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 327 bits (803), Expect = 5e-90
Identities = 151/161 (93%), Positives = 158/161 (98%)
Frame = +1
Query: 1 KLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGI 180
KLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GI
Sbjct: 172 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGI 231
Query: 181 HETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPE 360
HET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPE
Sbjct: 232 HETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 291
Query: 361 RKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 483
RKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 292 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 327 bits (803), Expect = 5e-90
Identities = 151/161 (93%), Positives = 158/161 (98%)
Frame = +1
Query: 1 KLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGI 180
KLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GI
Sbjct: 202 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGI 261
Query: 181 HETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPE 360
HET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPE
Sbjct: 262 HETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 321
Query: 361 RKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 483
RKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 322 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 327 bits (803), Expect = 5e-90
Identities = 151/161 (93%), Positives = 158/161 (98%)
Frame = +1
Query: 1 KLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGI 180
KLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GI
Sbjct: 216 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGI 275
Query: 181 HETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPE 360
HET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPE
Sbjct: 276 HETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 335
Query: 361 RKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 483
RKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 336 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 326 bits (801), Expect = 9e-90
Identities = 150/161 (93%), Positives = 158/161 (98%)
Frame = +1
Query: 1 KLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGI 180
KLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGMES GI
Sbjct: 216 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGI 275
Query: 181 HETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPE 360
HET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPE
Sbjct: 276 HETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 335
Query: 361 RKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 483
RKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 336 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 326 bits (801), Expect = 9e-90
Identities = 150/161 (93%), Positives = 158/161 (98%)
Frame = +1
Query: 1 KLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGI 180
KLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGMES GI
Sbjct: 216 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGI 275
Query: 181 HETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPE 360
HET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPE
Sbjct: 276 HETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 335
Query: 361 RKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 483
RKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 336 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 326 bits (801), Expect = 9e-90
Identities = 150/161 (93%), Positives = 158/161 (98%)
Frame = +1
Query: 1 KLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGI 180
KLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGMES GI
Sbjct: 216 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGI 275
Query: 181 HETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPE 360
HET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPE
Sbjct: 276 HETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 335
Query: 361 RKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 483
RKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 336 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 320 bits (786), Expect = 6e-88
Identities = 149/161 (92%), Positives = 157/161 (97%)
Frame = +1
Query: 1 KLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGI 180
KLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGMES GI
Sbjct: 216 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGI 275
Query: 181 HETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPE 360
HET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAP T+KIKIIAPPE
Sbjct: 276 HETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP-TMKIKIIAPPE 334
Query: 361 RKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 483
RKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 335 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 305 bits (748), Expect = 2e-83
Identities = 140/161 (86%), Positives = 150/161 (93%)
Frame = +1
Query: 1 KLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGI 180
KLCYVA DFE E+A AA+S+SLEKSYELPDGQVITIGNERFRCPE LFQP+F+GME GI
Sbjct: 215 KLCYVAHDFESELAAAASSSSLEKSYELPDGQVITIGNERFRCPEVLFQPAFIGMEGAGI 274
Query: 181 HETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPE 360
HET Y SIMKCDVDIRKDLYANTV+SGGT+M+PGIADRMQKEI LAPST+KIKIIAPPE
Sbjct: 275 HETTYQSIMKCDVDIRKDLYANTVLSGGTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPE 334
Query: 361 RKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 483
RKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 335 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 157 bits (381), Expect = 7e-39
Identities = 75/159 (47%), Positives = 103/159 (64%)
Frame = +1
Query: 7 CYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHE 186
CY+ALD T + S++ SY LPD I I N FR PE LF+P +G E G+
Sbjct: 221 CYLALD-----PTKVENNSVKSSYALPDTTKIEISNSLFRAPEVLFKPDLIGTEWPGMAH 275
Query: 187 TVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERK 366
V SIMKCDVD+R+ LY+N V+SGGTT++ G DR+ E+ +AP+ KI+I A ER
Sbjct: 276 VVNQSIMKCDVDLRQTLYSNIVLSGGTTLFKGFGDRLLGEMRKIAPADGKIRISASQERN 335
Query: 367 YSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 483
WIGGSI+ASL TF++MW+ K+EY++ G +H++ F
Sbjct: 336 SLTWIGGSIVASLDTFRKMWLGKKEYEDMGASAMHKRFF 374
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 151 bits (367), Expect = 3e-37
Identities = 75/165 (45%), Positives = 102/165 (61%), Gaps = 13/165 (7%)
Frame = +1
Query: 1 KLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGI 180
KLCY+A D EQE A +T L + Y LPDG+VI +G ERF PE LFQP + +E G+
Sbjct: 219 KLCYIAYDVEQEERLALETTVLSQQYTLPDGRVIRLGGERFEAPEILFQPHLINVEKAGL 278
Query: 181 HETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL-----------APS 327
E ++ I D+D R D Y + V+SGGTTMYPG+ R++KE+ L A
Sbjct: 279 SELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQ 338
Query: 328 TIKIKIIAPPERKYSVWIGGSILASL--STFQQMWISKEEYDESG 456
KI+I APP RK+ V++GG++LA+L Q W+SK+EY+E G
Sbjct: 339 KFKIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWVSKKEYEEGG 383
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 120 bits (289), Expect = 1e-27
Identities = 60/143 (41%), Positives = 80/143 (55%), Gaps = 8/143 (5%)
Frame = +1
Query: 76 YELPDGQVITIGNERFRCPEALFQPSFLGMES-----CGIHETVYNSIMKCDVDIRKDLY 240
Y P+G G ER + PE LF +L E + + S D+DIR L+
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLF 352
Query: 241 ANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP---ERKYSVWIGGSILASLST 411
+N ++GG ++ G +R+ + P TIK+++ A P ERKY WIGGSIL SL T
Sbjct: 353 SNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGT 412
Query: 412 FQQMWISKEEYDESGPGIVHRKC 480
FQQMW+SK EYDESG IV +KC
Sbjct: 413 FQQMWVSKAEYDESGKSIVEKKC 435
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 103 bits (247), Expect = 1e-22
Identities = 49/147 (33%), Positives = 89/147 (60%), Gaps = 3/147 (2%)
Frame = +1
Query: 10 YVALDFEQEMATAAAST--SLEKSYELPDGQV-ITIGNERFRCPEALFQPSFLGMESCGI 180
YV D+++E + T SL+ P Q I N RF C E LF+P G+++ G+
Sbjct: 393 YVPEDYQKEEKSENKETRISLDAFTPSPGMQTRFDIDNSRFLCTEGLFKPKKWGLDTKGL 452
Query: 181 HETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPE 360
H+ ++ +I++C +D R+ LY N ++GG ++ PGIA+++++E++ + P+TI ++ P
Sbjct: 453 HQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLEQELSTVVPNTIHTQVNISPW 512
Query: 361 RKYSVWIGGSILASLSTFQQMWISKEE 441
R + ++G I+AS STF+ IS ++
Sbjct: 513 RYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 92.7 bits (220), Expect = 2e-19
Identities = 50/139 (35%), Positives = 78/139 (56%), Gaps = 17/139 (12%)
Frame = +1
Query: 100 ITIGNERFRCPEALFQPSFLGME-SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMY 276
+ +G ERF PE F P F E + I +T+ I +C +D+R+ LY N V+SGG+TM+
Sbjct: 276 VDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMF 335
Query: 277 PGIADRMQKEITALA----------------PSTIKIKIIAPPERKYSVWIGGSILASLS 408
A ++Q+++ L+ P I +++I+ ++Y+VW GGS+LAS S
Sbjct: 336 KDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTS 395
Query: 409 TFQQMWISKEEYDESGPGI 465
F Q+ +K EY E GP I
Sbjct: 396 EFYQVSHTKAEYMERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 75.8 bits (178), Expect = 3e-14
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 3/155 (1%)
Frame = +1
Query: 10 YVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHET 189
Y+ DF ++P I +G ERF PE LF PS + ++ CG+ E
Sbjct: 236 YIMPDFHSTFRGVVKDVKEPHDPQIPS---IHLGVERFAIPEILFNPSDIDIDQCGVAEA 292
Query: 190 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI---IAPPE 360
V SI +C +R L N ++ GG++ +PG +R+++E+ ++ P+ + + + P+
Sbjct: 293 VIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQ 352
Query: 361 RKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 465
W G L L+ + WI+++++DE G +
Sbjct: 353 T--HSWHCGQEL--LTASKVPWINRKDWDERGDSL 383
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 75.8 bits (178), Expect = 3e-14
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 3/155 (1%)
Frame = +1
Query: 10 YVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHET 189
Y+ DF ++P I +G ERF PE LF PS + ++ CG+ E
Sbjct: 236 YIMPDFHSTFRGVVKDVKEPHDPQIPS---IHLGVERFAIPEILFNPSDIDIDQCGVAEA 292
Query: 190 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI---IAPPE 360
V SI +C +R L N ++ GG++ +PG +R+++E+ ++ P+ + + + P+
Sbjct: 293 VIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQ 352
Query: 361 RKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 465
W G L L+ + WI+++++DE G +
Sbjct: 353 T--HSWHCGQEL--LTASKVPWINRKDWDERGDSL 383
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 48.0 bits (109), Expect = 6e-06
Identities = 28/95 (29%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Frame = +1
Query: 190 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL-APSTIKIKIIAP---- 354
++ + KC +D+RK L+ N +++GG + PG+ R+++EI + + KI +I
Sbjct: 194 LHKLVSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQF 253
Query: 355 PERK----YSVWIGGSILASL-STFQQMWISKEEY 444
E K + W+G S+L SL T ++ ++ EE+
Sbjct: 254 SEIKNTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = +3
Query: 177 HPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPR 320
HP + HH+ H PV HR R H Q A RPR
Sbjct: 769 HPHHQQMPHHQPHLHHAHHPVHPHRGPRASHSQHLQHGQYAHHTQRPR 816
>AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical
protein T24C4.7 protein.
Length = 798
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 276 PRYRRQDAEGDHRPRALDHQDQDHRSPREEVLR 374
P+YRRQ L Q Q HR PRE +L+
Sbjct: 181 PKYRRQVMHCSKSEHKLVLQTQKHRLPRERMLK 213
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/66 (25%), Positives = 21/66 (31%)
Frame = +3
Query: 201 HHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRSPREEVLRMD 380
HH H G H H HH P + E H P H + H +P +
Sbjct: 432 HHHAPAHH--GHHESHGHG---HHSPAHHGHHGEHHHAPAHHGHHGEHHHAPAHHGHHGE 486
Query: 381 RWIHPG 398
H G
Sbjct: 487 HGTHHG 492
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,337,640
Number of Sequences: 27780
Number of extensions: 274381
Number of successful extensions: 851
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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