Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0613
(687 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 297 4e-81
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 297 4e-81
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 296 1e-80
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 293 7e-80
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 292 1e-79
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 292 1e-79
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 286 8e-78
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 285 2e-77
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 272 1e-73
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 257 6e-69
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 248 2e-66
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 229 2e-60
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 140 8e-34
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 134 4e-32
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 127 8e-30
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 102 3e-22
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 85 3e-17
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 75 4e-14
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 70 2e-12
At5g43500.2 68418.m05318 expressed protein 46 3e-05
At5g43500.1 68418.m05319 expressed protein 46 3e-05
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 42 5e-04
At3g14720.1 68416.m01861 mitogen-activated protein kinase, putat... 34 0.077
At1g53510.1 68414.m06068 mitogen-activated protein kinase, putat... 29 2.2
At2g46430.1 68415.m05778 cyclic nucleotide-regulated ion channel... 28 6.7
At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp... 27 8.8
At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp... 27 8.8
At4g30520.1 68417.m04333 leucine-rich repeat family protein / pr... 27 8.8
At3g24210.1 68416.m03038 ankyrin repeat family protein contains ... 27 8.8
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 297 bits (729), Expect = 4e-81
Identities = 132/161 (81%), Positives = 149/161 (92%)
Frame = +1
Query: 1 KLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGI 180
KLCY+ALD+EQE+ TA S+S+EK+YELPDGQVITIG+ERFRCPE L+QPS +GME+ GI
Sbjct: 217 KLCYIALDYEQELETAKTSSSVEKNYELPDGQVITIGSERFRCPEVLYQPSMIGMENAGI 276
Query: 181 HETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPE 360
HET YNSIMKCDVDIRKDLY N V+SGGTTM+PGIADRM KEITALAPS++KIK++APPE
Sbjct: 277 HETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPE 336
Query: 361 RKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 483
RKYSVWIGGSILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 337 RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 297 bits (729), Expect = 4e-81
Identities = 132/161 (81%), Positives = 149/161 (92%)
Frame = +1
Query: 1 KLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGI 180
KLCY+ALD+EQE+ TA S+S+EK+YELPDGQVITIG+ERFRCPE L+QPS +GME+ GI
Sbjct: 217 KLCYIALDYEQELETAKTSSSVEKNYELPDGQVITIGSERFRCPEVLYQPSMIGMENAGI 276
Query: 181 HETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPE 360
HET YNSIMKCDVDIRKDLY N V+SGGTTM+PGIADRM KEITALAPS++KIK++APPE
Sbjct: 277 HETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPE 336
Query: 361 RKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 483
RKYSVWIGGSILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 337 RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 296 bits (726), Expect = 1e-80
Identities = 134/161 (83%), Positives = 147/161 (91%)
Frame = +1
Query: 1 KLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGI 180
KL Y+ALD+EQEM TA S+S+EKSYELPDGQVITIG ERFRCPE LFQPS +GME+ GI
Sbjct: 217 KLAYIALDYEQEMETANTSSSVEKSYELPDGQVITIGGERFRCPEVLFQPSLVGMEAAGI 276
Query: 181 HETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPE 360
HET YNSIMKCDVDIRKDLY N V+SGGTTM+PGIADRM KEITALAPS++KIK++APPE
Sbjct: 277 HETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPE 336
Query: 361 RKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 483
RKYSVWIGGSILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 337 RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 293 bits (719), Expect = 7e-80
Identities = 133/161 (82%), Positives = 148/161 (91%)
Frame = +1
Query: 1 KLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGI 180
KL YVALD+EQE+ TA +S+S+EK+YELPDGQVITIG ERFRCPE LFQPS +GME+ GI
Sbjct: 217 KLAYVALDYEQELETAKSSSSVEKNYELPDGQVITIGAERFRCPEVLFQPSLIGMEAPGI 276
Query: 181 HETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPE 360
HET YNSIMKCDVDIRKDLY N V+SGG+TM+PGIADRM KEITALAPS++KIK++APPE
Sbjct: 277 HETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPE 336
Query: 361 RKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 483
RKYSVWIGGSILASLSTFQQMWISK EYDESGP IVHRKCF
Sbjct: 337 RKYSVWIGGSILASLSTFQQMWISKSEYDESGPSIVHRKCF 377
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 292 bits (717), Expect = 1e-79
Identities = 132/161 (81%), Positives = 148/161 (91%)
Frame = +1
Query: 1 KLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGI 180
KL +VA+D+EQEM T+ S+S+EK+YELPDGQVITIG ERFRCPE LFQPSF+GME+ GI
Sbjct: 217 KLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGI 276
Query: 181 HETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPE 360
HET YNSIMKCDVDIRKDLY N V+SGGTTM+ GIADRM KEITALAPS++KIK++APPE
Sbjct: 277 HETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPE 336
Query: 361 RKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 483
RKYSVWIGGSILASLSTFQQMWISK EYDE+GPGIVHRKCF
Sbjct: 337 RKYSVWIGGSILASLSTFQQMWISKAEYDEAGPGIVHRKCF 377
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 292 bits (717), Expect = 1e-79
Identities = 132/161 (81%), Positives = 148/161 (91%)
Frame = +1
Query: 1 KLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGI 180
KL +VA+D+EQEM T+ S+S+EK+YELPDGQVITIG ERFRCPE LFQPSF+GME+ GI
Sbjct: 217 KLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGI 276
Query: 181 HETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPE 360
HET YNSIMKCDVDIRKDLY N V+SGGTTM+ GIADRM KEITALAPS++KIK++APPE
Sbjct: 277 HETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPE 336
Query: 361 RKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 483
RKYSVWIGGSILASLSTFQQMWISK EYDE+GPGIVHRKCF
Sbjct: 337 RKYSVWIGGSILASLSTFQQMWISKAEYDEAGPGIVHRKCF 377
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 286 bits (702), Expect = 8e-78
Identities = 130/161 (80%), Positives = 145/161 (90%)
Frame = +1
Query: 1 KLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGI 180
KL Y+ALDFEQE+ T+ S+S+EKS+ELPDGQVITIG ERFRCPE LFQPS +GME+ GI
Sbjct: 217 KLSYIALDFEQELETSKTSSSVEKSFELPDGQVITIGAERFRCPEVLFQPSMIGMENPGI 276
Query: 181 HETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPE 360
HET YNSIMKCDVDIRKDLY N V+SGGTTM+ GI DRM KEITALAPS++KIK++APPE
Sbjct: 277 HETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPE 336
Query: 361 RKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 483
RKYSVWIGGSILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 337 RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 285 bits (699), Expect = 2e-77
Identities = 129/161 (80%), Positives = 145/161 (90%)
Frame = +1
Query: 1 KLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGI 180
KL Y+ALD+EQE+ T+ S+S+EKS+ELPDGQVITIG ERFRCPE LFQPS +GME+ GI
Sbjct: 217 KLSYIALDYEQELETSKTSSSVEKSFELPDGQVITIGAERFRCPEVLFQPSMIGMENPGI 276
Query: 181 HETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPE 360
HET YNSIMKCDVDIRKDLY N V+SGGTTM+ GI DRM KEITALAPS++KIK++APPE
Sbjct: 277 HETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPE 336
Query: 361 RKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 483
RKYSVWIGGSILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 337 RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 272 bits (667), Expect = 1e-73
Identities = 120/161 (74%), Positives = 140/161 (86%)
Frame = +1
Query: 1 KLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGI 180
KLCY+A+D+EQEM A S++++++YELPDGQVITIG ERFRCPE LFQ S +GME+ GI
Sbjct: 218 KLCYIAVDYEQEMEKATTSSAIDRTYELPDGQVITIGAERFRCPEVLFQTSLIGMETSGI 277
Query: 181 HETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPE 360
HET YNSIMKCDVDIRKDLY N V+SGGTTM+PGIADRM KEI ALAP ++KIK++APPE
Sbjct: 278 HETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMNKEINALAPPSMKIKVVAPPE 337
Query: 361 RKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 483
RKYSVW+GGSILASLS+F MWI+K EYDE G IVHRKCF
Sbjct: 338 RKYSVWVGGSILASLSSFAPMWITKAEYDEQGGAIVHRKCF 378
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 257 bits (629), Expect = 6e-69
Identities = 114/158 (72%), Positives = 136/158 (86%)
Frame = +1
Query: 10 YVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHET 189
Y+ALD+EQEM A S++++++YELPDGQVITIG ERFRCPE LFQPS +GME+ GIHE
Sbjct: 172 YIALDYEQEMEKATKSSAIDRTYELPDGQVITIGAERFRCPEVLFQPSLIGMETSGIHEK 231
Query: 190 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKY 369
YNSIMKCD DIRKDLY N V+SGGTTM+ GI +RM KEI ALA + ++IKI+APPERKY
Sbjct: 232 TYNSIMKCDDDIRKDLYGNIVLSGGTTMFRGIEERMTKEINALAAANMRIKIVAPPERKY 291
Query: 370 SVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 483
SVWIGGSILASLST++QMWI+K EY+E+GP IVH KCF
Sbjct: 292 SVWIGGSILASLSTYEQMWITKAEYEENGPAIVHTKCF 329
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 248 bits (608), Expect = 2e-66
Identities = 114/145 (78%), Positives = 131/145 (90%)
Frame = +1
Query: 1 KLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGI 180
KL +VA+D+EQEM T+ S+S+EK+YELPDGQVITIG ERFRCPE LFQPSF+GME+ GI
Sbjct: 217 KLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGI 276
Query: 181 HETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPE 360
HET YNSIMKCDVDIRKDLY N V+SGGTTM+ GIADRM KEITALAPS++KIK++APPE
Sbjct: 277 HETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPE 336
Query: 361 RKYSVWIGGSILASLSTFQQMWISK 435
RKYSVWIGGSILASLSTFQQ+ I +
Sbjct: 337 RKYSVWIGGSILASLSTFQQVKIDQ 361
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 229 bits (559), Expect = 2e-60
Identities = 102/160 (63%), Positives = 124/160 (77%)
Frame = +1
Query: 1 KLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGI 180
KLCYVALD+EQEM +++K+Y LPDGQ ITI ERF CPE LFQPS +G ES GI
Sbjct: 206 KLCYVALDYEQEMEKTTKGWTIDKTYVLPDGQEITIEAERFMCPEVLFQPSVIGKESSGI 265
Query: 181 HETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPE 360
HE NSI+KC VD R+D+Y N +M+GGTTM GI +RM KE+ AL PS++K+K++ PPE
Sbjct: 266 HEATRNSILKCPVDTRRDMYGNILMTGGTTMLHGIKERMTKELNALVPSSMKVKVVVPPE 325
Query: 361 RKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKC 480
+ SVWIGGSILASLSTF QMWI+K+EY+E G IVHRKC
Sbjct: 326 SECSVWIGGSILASLSTFHQMWITKDEYEEHGAAIVHRKC 365
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 140 bits (339), Expect = 8e-34
Identities = 68/151 (45%), Positives = 100/151 (66%), Gaps = 15/151 (9%)
Frame = +1
Query: 73 SYELPDGQVITIGNERFRCPEALFQPSFL----GMESC--------GIHETVYNSIMKCD 216
SYELPDGQ + IG +RF+ P+ +F PS + GME G+ V SI KCD
Sbjct: 290 SYELPDGQTLEIGADRFKVPDVMFNPSIVQTIPGMEKYAEMIPSVRGLPHMVMESINKCD 349
Query: 217 VDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAP---PERKYSVWIGG 387
VDIR++LY++ +++GGT+ + +R++K++ +P + ++K++A ER++SVWIGG
Sbjct: 350 VDIRRELYSSILLAGGTSSMQQLKERLEKDLIEESPHSARVKVLASGNTTERRFSVWIGG 409
Query: 388 SILASLSTFQQMWISKEEYDESGPGIVHRKC 480
SILASL +FQQMW SK EY+E G + RKC
Sbjct: 410 SILASLGSFQQMWFSKSEYEEHGASYIQRKC 440
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 134 bits (325), Expect = 4e-32
Identities = 66/164 (40%), Positives = 104/164 (63%), Gaps = 12/164 (7%)
Frame = +1
Query: 1 KLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGI 180
KLCY++ D+++E +T L K+Y LPDG+VI +G ERF+ PEALF P + +E G+
Sbjct: 216 KLCYISYDYKRESQLGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGM 275
Query: 181 HETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEI------TALAPS----- 327
+ V+ I + D+D R LY + V+SGG+TMYPG+ R++KEI T L +
Sbjct: 276 ADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEIQDRYLDTVLKGNKDGLK 335
Query: 328 TIKIKIIAPPERKYSVWIGGSILAS-LSTFQQMWISKEEYDESG 456
++++I PP RK+ V++GG++LA + + WI++E+Y E G
Sbjct: 336 KLRLRIEDPPRRKHMVYLGGAVLAGIMKDAPEFWINREDYMEEG 379
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 127 bits (306), Expect = 8e-30
Identities = 68/158 (43%), Positives = 89/158 (56%), Gaps = 6/158 (3%)
Frame = +1
Query: 28 EQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIM 207
E E+A + + LPDGQVI+IG ER+ EALFQPS LG+E GI E + I
Sbjct: 207 EDEIAYKKTQNCEIEQHTLPDGQVISIGRERYSVGEALFQPSILGLEEHGIVEQLVRIIS 266
Query: 208 KCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPE------RKY 369
+ + L NTV+ GGTT G R QKE L S I+ ++ PPE Y
Sbjct: 267 TVSSENHRQLLENTVLCGGTTSMTGFESRFQKEAN-LCSSAIRPTLVKPPEYMPENLGMY 325
Query: 370 SVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 483
S W+GG+ILA + Q ++K +YDE+GP +VHRKCF
Sbjct: 326 SAWVGGAILAKVVFPQNQHVTKADYDETGPSVVHRKCF 363
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 102 bits (244), Expect = 3e-22
Identities = 47/128 (36%), Positives = 74/128 (57%)
Frame = +1
Query: 100 ITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYP 279
I + NERF PE LFQP+ LGM G+ E + +I C ++ LY + +++GG+T++P
Sbjct: 293 IDLTNERFLVPETLFQPADLGMNQAGLAECIVRAINSCHSYLQPVLYQSIILTGGSTLFP 352
Query: 280 GIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGP 459
+ +R++ E+ L P +KI + VW GGS+LAS F+ M ++K EY+E G
Sbjct: 353 QLKERLEGELRPLVPDHFDVKITTQEDPILGVWRGGSLLASSPDFESMCVTKAEYEELGS 412
Query: 460 GIVHRKCF 483
R+ F
Sbjct: 413 ARCRRRFF 420
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 85.4 bits (202), Expect = 3e-17
Identities = 49/154 (31%), Positives = 85/154 (55%), Gaps = 6/154 (3%)
Frame = +1
Query: 1 KLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGI 180
KLCYVALD++ E+ S + S E+ T+ ERF+ E LFQP GM + +
Sbjct: 315 KLCYVALDYKAEL-----SKDTQASVEVSGEGWFTLSKERFQTGEILFQPRLAGMRAMSL 369
Query: 181 HETVYNSIMKCD-VDIRKD--LYANTVMSGGTTMYPGIADRMQKEITALAPSTIK--IKI 345
H+ V + CD + D + V++GG+ PG+++R+++E+ PS+I I++
Sbjct: 370 HQAVSLCMDHCDAAGLTGDDSWFKTVVLTGGSACLPGLSERLERELQDHLPSSISNGIRV 429
Query: 346 IAPPERKYSVWIGGSILASLSTFQQMW-ISKEEY 444
I PP + W G ++++LS F W I+++++
Sbjct: 430 IPPPYGVDTSWHGAKLISNLSIFPGPWCITRKQF 463
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 74.9 bits (176), Expect = 4e-14
Identities = 38/122 (31%), Positives = 65/122 (53%), Gaps = 3/122 (2%)
Frame = +1
Query: 100 ITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKC---DVDIRKDLYANTVMSGGTT 270
I IG ERFRCPE LF P+ +G++ G+ E SI + + ++ + L ++ +M+GG +
Sbjct: 589 IVIGIERFRCPEILFHPNLIGIDQVGLDEMAGTSIRRLPHDEKELEERLTSSILMTGGCS 648
Query: 271 MYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDE 450
+ PG+ +R++ I + P I ++ + W G S A+ F +K +YDE
Sbjct: 649 LLPGMNERLECGIRMIRPCGSPINVVRAMDPVLDAWRGASAFAANLNFLGNAFTKMDYDE 708
Query: 451 SG 456
G
Sbjct: 709 KG 710
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 69.7 bits (163), Expect = 2e-12
Identities = 38/137 (27%), Positives = 68/137 (49%), Gaps = 17/137 (12%)
Frame = +1
Query: 106 IGNERFRCPEALFQPSFLGME-SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPG 282
+G ERF PE F P + + + + I +D R+ LY N V+SGG+TM+
Sbjct: 280 VGYERFLGPEVFFNPEIYSNDFTTTLPAVIDKCIQSAPIDTRRALYKNIVLSGGSTMFKD 339
Query: 283 IADRMQKEITALAPS----------------TIKIKIIAPPERKYSVWIGGSILASLSTF 414
R+Q+++ + + +++ +++ P ++++VW GGS+L+S F
Sbjct: 340 FGRRLQRDLKKIVDARVLANNARTGGEITSQPVEVNVVSHPVQRFAVWFGGSVLSSTPEF 399
Query: 415 QQMWISKEEYDESGPGI 465
+KEEY+E G I
Sbjct: 400 FASCRTKEEYEEYGASI 416
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/102 (23%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Frame = +1
Query: 166 ESCGIHETVYNSIMKCD-VDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIK 342
E G+ E + +SI+ +D+R+ L+++ + GG + G+ +++ + P T I
Sbjct: 458 EKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAID 517
Query: 343 II----APPERKYSVWIGGSILASLSTFQQMWISKEEYDESG 456
+ + E ++ W GG+IL L ++ WI + ++ +G
Sbjct: 518 TVQVLPSRTEPQFVTWKGGAILGILDFGREAWIERHQWMVNG 559
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/102 (23%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Frame = +1
Query: 166 ESCGIHETVYNSIMKCD-VDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIK 342
E G+ E + +SI+ +D+R+ L+++ + GG + G+ +++ + P T I
Sbjct: 470 EKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAID 529
Query: 343 II----APPERKYSVWIGGSILASLSTFQQMWISKEEYDESG 456
+ + E ++ W GG+IL L ++ WI + ++ +G
Sbjct: 530 TVQVLPSRTEPQFVTWKGGAILGILDFGREAWIERHQWMVNG 571
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 41.5 bits (93), Expect = 5e-04
Identities = 25/65 (38%), Positives = 35/65 (53%)
Frame = +1
Query: 1 KLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGI 180
KLCYVALD++ E+ S + S E+ T+ ERF+ E LFQP G+ +
Sbjct: 315 KLCYVALDYKAEL-----SKDTQASVEVSGEGWFTLSKERFQTGEILFQPRLAGII---V 366
Query: 181 HETVY 195
H+ VY
Sbjct: 367 HKLVY 371
>At3g14720.1 68416.m01861 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK19) identical to mitogen-activated
protein kinase (MAPK)(AtMPK19), PMID:12119167;
Length = 586
Score = 34.3 bits (75), Expect = 0.077
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = +1
Query: 178 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP 357
I E +Y I++ + KD Y N+ G + +YP ++K+ L ++ K + PP
Sbjct: 336 IRELIYREILEYHPQLLKD-YMNS--EGSSFLYPSAIGHLRKQFAYLEENSGKSGPVIPP 392
Query: 358 ERKYS 372
+RK++
Sbjct: 393 DRKHA 397
>At1g53510.1 68414.m06068 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK18) mitogen-activated protein
kinase (MAPK)(AtMPK18), PMID:12119167
Length = 603
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/65 (23%), Positives = 32/65 (49%)
Frame = +1
Query: 178 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP 357
I E +Y I++ + KD + + G +YP ++++ T L ++ + + P
Sbjct: 336 IRELIYREILEYHPQLLKDYMSGS--EGSNFVYPSAIGHLRQQFTYLEENSSRNGPVIPL 393
Query: 358 ERKYS 372
ERK++
Sbjct: 394 ERKHA 398
>At2g46430.1 68415.m05778 cyclic nucleotide-regulated ion channel /
cyclic nucleotide-gated channel (CNGC3) identical to
cyclic nucleotide and calmodulin-regulated ion channel
GI:4581201 from [Arabidopsis thaliana]
Length = 706
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = -2
Query: 293 LSAIPGYMVVPPDMTVLA--YRSLRMSTSHFMMELYTVSWMPHDSIPRKEGWKR 138
L+ + G+++ D+ +A YR L M Y+V W + + WKR
Sbjct: 571 LTEVEGFLLSADDLKFVATQYRRLHSKQLRHMFRFYSVQWQTWAACFIQAAWKR 624
>At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 844
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +3
Query: 174 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDH-QDQDH 347
RH RD+ + + +HRH + Y D EG+HR R+ H +D D+
Sbjct: 672 RHSRDKHKHESSSDDEYHSRSRHRHRHSKSSDRHELYDSSDNEGEHRHRSSKHSKDVDY 730
>At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 843
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +3
Query: 174 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDH-QDQDH 347
RH RD+ + + +HRH + Y D EG+HR R+ H +D D+
Sbjct: 672 RHSRDKHKHESSSDDEYHSRSRHRHRHSKSSDRHELYDSSDNEGEHRHRSSKHSKDVDY 730
>At4g30520.1 68417.m04333 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 648
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -2
Query: 215 SHFMMELYTVSWMPHDSIPRKEGWKRASGQRNLSLPMVIT*PSGS 81
S F MEL +S H ++ R G+ SG+R L P + P+GS
Sbjct: 343 SQFRMELEMISLAVHKNLLRLIGYCATSGERLLVYPYM---PNGS 384
>At3g24210.1 68416.m03038 ankyrin repeat family protein contains
ankyrin repeats, Pfam domain PF00023
Length = 607
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 294 DAEGDHRPRALDHQDQDHRSPREEVLRMDRWIHPGFPV 407
D E +P+AL H S ++ LR W+ P FP+
Sbjct: 423 DNEHYRKPKALVSDKTRHESEYKKGLRPVLWLSPNFPL 460
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,814,805
Number of Sequences: 28952
Number of extensions: 263442
Number of successful extensions: 847
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 834
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1457719448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -