Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0608
         (634 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    23   1.6  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      23   1.6  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      23   1.6  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   2.1  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    22   4.9  

>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -1

Query: 340 CYLSIFNSQKPETYRKLSFVIGMSVSTNKGMF 245
           C L+ F    P+T ++L+  +GM  +  K +F
Sbjct: 217 CALNGFARGIPDTSKQLAAALGMQTTNEKEIF 248


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -1

Query: 340 CYLSIFNSQKPETYRKLSFVIGMSVSTNKGMF 245
           C L+ F    P+T ++L+  +GM  +  K +F
Sbjct: 215 CALNGFARGIPDTSKQLAAALGMQTTNEKEIF 246


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -1

Query: 340 CYLSIFNSQKPETYRKLSFVIGMSVSTNKGMF 245
           C L+ F    P+T ++L+  +GM  +  K +F
Sbjct: 217 CALNGFARGIPDTSKQLAAALGMQTTNEKEIF 248


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 165 IMNDDR*LFFNFISSIIC 112
           + ND R +F NF  ++IC
Sbjct: 456 VFNDQRTVFANFYDAMIC 473


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -1

Query: 340 CYLSIFNSQKPETYRKLSFVIGMSVSTNKGMF 245
           C  + F    P+T ++L+  +GM  +  K +F
Sbjct: 215 CAFNGFARGIPDTSKQLAAALGMQTTNEKEIF 246


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,764
Number of Sequences: 336
Number of extensions: 3086
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)