Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0608
         (634 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    27   0.49 
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    24   4.6  
DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist mic...    23   8.1  

>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 27.1 bits (57), Expect = 0.49
 Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
 Frame = -2

Query: 573 LANTVSLYFFSNGNVYLSSHSSKGLSKPRPMLGNCGAWI*QSINPGIIN*LSLRFITMCS 394
           + N   L   SN   Y+SS   K L   +   G+CG  +  ++ PG  N  S     +C+
Sbjct: 545 ILNWCMLVRSSNVCPYVSSTMEKTLDSQQA--GSCGESLNGTVGPGGDNDASQA--NLCT 600

Query: 393 LNLPALRSSSNSS--IDPFCVIFPFS 322
             +P L +S++ S  I P   + P S
Sbjct: 601 DTIPLLCASNSGSTVISPNATVCPMS 626


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -2

Query: 498 SKPRPMLGNCGAWI*Q-SINPGIIN*LSLRFITMCSLNLPALRSSSNSSIDP 346
           S PRP  G     I + S +PG+   ++ R  T+C+ + P   +++  ++ P
Sbjct: 128 SDPRPATGRKRRRIIEDSASPGVNKIVNSRGNTLCAASSPNAYTNTTIAVQP 179


>DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist
           michelob_x protein.
          Length = 201

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +1

Query: 160 HNYYFNYR*CHITCNFVSLIY*K*KNDPE 246
           +NYY+NY   +I+ +F+   Y + K+D E
Sbjct: 161 NNYYYNYYCRNISHHFLRCFY-RHKDDEE 188


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 615,352
Number of Sequences: 2352
Number of extensions: 12021
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61886940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)