Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0608
         (634 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001536-1|AAN71291.1|  448|Drosophila melanogaster RE08243p pro...   109   4e-24
AY118584-1|AAM49953.1|  448|Drosophila melanogaster LD44207p pro...   109   4e-24
AE014297-13|AAF52167.1|  448|Drosophila melanogaster CG18143-PA ...   109   4e-24
BT004905-1|AAO47883.1|  232|Drosophila melanogaster GH17679p pro...    28   9.1  
AE014134-2868|AAF53631.1|  232|Drosophila melanogaster CG5545-PA...    28   9.1  
AE013599-3171|AAF46706.1| 1283|Drosophila melanogaster CG10505-P...    28   9.1  

>BT001536-1|AAN71291.1|  448|Drosophila melanogaster RE08243p
           protein.
          Length = 448

 Score =  109 bits (261), Expect = 4e-24
 Identities = 56/129 (43%), Positives = 78/129 (60%), Gaps = 2/129 (1%)
 Frame = +2

Query: 254 FVGAYAHSDNKRQL-SVCFGFLTIEN-GKITQKGSIEEFEELLSAGKFSEHIVINLSDSQ 427
           F+G   H+ +  +  S   GFL +++ GKI   G         +         ++LSD Q
Sbjct: 5   FLGTVVHTKSFSEFESFEGGFLAVDDAGKIIGVGQDYHAWASSNPAHAKGLTEVHLSDYQ 64

Query: 428 LIIPGFIDCHIHAPQFPNIGLGLDRPLLEWLDKYTFPLEKKYSDTVFASKVYDQVVQRLL 607
            ++PGF+DCHIHAPQF  +GLGLD PLL+WL+ YTFPLE K+S+  +A +VY  VV+  L
Sbjct: 65  FLMPGFVDCHIHAPQFAQLGLGLDMPLLDWLNTYTFPLEAKFSNHQYAQQVYQGVVEATL 124

Query: 608 KNGTTTACY 634
           + GTT A Y
Sbjct: 125 RCGTTLASY 133


>AY118584-1|AAM49953.1|  448|Drosophila melanogaster LD44207p
           protein.
          Length = 448

 Score =  109 bits (261), Expect = 4e-24
 Identities = 56/129 (43%), Positives = 78/129 (60%), Gaps = 2/129 (1%)
 Frame = +2

Query: 254 FVGAYAHSDNKRQL-SVCFGFLTIEN-GKITQKGSIEEFEELLSAGKFSEHIVINLSDSQ 427
           F+G   H+ +  +  S   GFL +++ GKI   G         +         ++LSD Q
Sbjct: 5   FLGTVVHTKSFSEFESFEGGFLAVDDAGKIIGVGQDYHAWASSNPAHAKGLTEVHLSDYQ 64

Query: 428 LIIPGFIDCHIHAPQFPNIGLGLDRPLLEWLDKYTFPLEKKYSDTVFASKVYDQVVQRLL 607
            ++PGF+DCHIHAPQF  +GLGLD PLL+WL+ YTFPLE K+S+  +A +VY  VV+  L
Sbjct: 65  FLMPGFVDCHIHAPQFAQLGLGLDMPLLDWLNTYTFPLEAKFSNHQYAQQVYQGVVEATL 124

Query: 608 KNGTTTACY 634
           + GTT A Y
Sbjct: 125 RCGTTLASY 133


>AE014297-13|AAF52167.1|  448|Drosophila melanogaster CG18143-PA
           protein.
          Length = 448

 Score =  109 bits (261), Expect = 4e-24
 Identities = 56/129 (43%), Positives = 78/129 (60%), Gaps = 2/129 (1%)
 Frame = +2

Query: 254 FVGAYAHSDNKRQL-SVCFGFLTIEN-GKITQKGSIEEFEELLSAGKFSEHIVINLSDSQ 427
           F+G   H+ +  +  S   GFL +++ GKI   G         +         ++LSD Q
Sbjct: 5   FLGTVVHTKSFSEFESFEGGFLAVDDAGKIIGVGQDYHAWASSNPAHAKGLTEVHLSDYQ 64

Query: 428 LIIPGFIDCHIHAPQFPNIGLGLDRPLLEWLDKYTFPLEKKYSDTVFASKVYDQVVQRLL 607
            ++PGF+DCHIHAPQF  +GLGLD PLL+WL+ YTFPLE K+S+  +A +VY  VV+  L
Sbjct: 65  FLMPGFVDCHIHAPQFAQLGLGLDMPLLDWLNTYTFPLEAKFSNHQYAQQVYQGVVEATL 124

Query: 608 KNGTTTACY 634
           + GTT A Y
Sbjct: 125 RCGTTLASY 133


>BT004905-1|AAO47883.1|  232|Drosophila melanogaster GH17679p
           protein.
          Length = 232

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +2

Query: 266 YAHSDNKRQLSVCFGFLTIENGKITQKGSIEEFEELLS 379
           YAHS + R+LS     L  +N  + Q+ ++EE   LL+
Sbjct: 157 YAHSPSVRKLSKIATLLLAKNYILMQQNALEELRRLLA 194


>AE014134-2868|AAF53631.1|  232|Drosophila melanogaster CG5545-PA
           protein.
          Length = 232

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +2

Query: 266 YAHSDNKRQLSVCFGFLTIENGKITQKGSIEEFEELLS 379
           YAHS + R+LS     L  +N  + Q+ ++EE   LL+
Sbjct: 157 YAHSPSVRKLSKIATLLLAKNYILMQQNALEELRRLLA 194


>AE013599-3171|AAF46706.1| 1283|Drosophila melanogaster CG10505-PA
           protein.
          Length = 1283

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 10/22 (45%), Positives = 18/22 (81%)
 Frame = +2

Query: 314 LTIENGKITQKGSIEEFEELLS 379
           L +E GK+TQ+GS EE +++++
Sbjct: 597 LLLEGGKLTQQGSYEELKDVIT 618


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,412,624
Number of Sequences: 53049
Number of extensions: 491992
Number of successful extensions: 1128
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1128
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2641708800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)