Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0604
(647 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 24 1.1
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 24 1.1
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 4.4
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 22 4.4
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 22 5.9
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 22 5.9
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 22 5.9
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 22 5.9
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 5.9
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 21 7.8
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 21 7.8
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 24.2 bits (50), Expect = 1.1
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +3
Query: 477 FTLAEIKTLRARERIPDIRAGNARMDGTFTIPTFQE 584
+ + EIK RA +PD DGT I + Q+
Sbjct: 545 YPIEEIKWERANRELPDDLRQKVLPDGTLVITSVQK 580
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 24.2 bits (50), Expect = 1.1
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +3
Query: 477 FTLAEIKTLRARERIPDIRAGNARMDGTFTIPTFQE 584
+ + EIK RA +PD DGT I + Q+
Sbjct: 545 YPIEEIKWERANRELPDDLRQKVLPDGTLVITSVQK 580
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 22.2 bits (45), Expect = 4.4
Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Frame = -1
Query: 581 LKRRNREGAIHTCVAS--SDIWYAFSSS*RFYFGQCKIFREPTGDSRSVHCLSPVACSEF 408
LK R R +H +S + W +S + CK+ R P G + + L + F
Sbjct: 67 LKLRIRCSDVHHFESSFNAQSWQRLTSLHELHVHGCKVLRIPEGAFQPLLELKKLTVQTF 126
Query: 407 NT 402
N+
Sbjct: 127 NS 128
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 22.2 bits (45), Expect = 4.4
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +3
Query: 3 AGREISVIDTSYTDLFSLVTVFFVCSLTDIWVSNM 107
A REI+ SY L F V + D W SN+
Sbjct: 332 AAREITSSSCSYMAHEKLSYAFSVWRMEDDWNSNL 366
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 5.9
Identities = 11/59 (18%), Positives = 24/59 (40%)
Frame = -2
Query: 241 RWAMISGEQKSEFKNSELKSRFSFTGIPKVIPTVXKESTNSPKIFILLTQISVREHTKN 65
R++ +K +KN ++ T + +E + PKI L+ ++ + N
Sbjct: 38 RYSRSREREKKSYKNENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNN 96
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 5.9
Identities = 11/59 (18%), Positives = 24/59 (40%)
Frame = -2
Query: 241 RWAMISGEQKSEFKNSELKSRFSFTGIPKVIPTVXKESTNSPKIFILLTQISVREHTKN 65
R++ +K +KN ++ T + +E + PKI L+ ++ + N
Sbjct: 38 RYSRSREREKKSYKNENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNN 96
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 21.8 bits (44), Expect = 5.9
Identities = 11/59 (18%), Positives = 24/59 (40%)
Frame = -2
Query: 241 RWAMISGEQKSEFKNSELKSRFSFTGIPKVIPTVXKESTNSPKIFILLTQISVREHTKN 65
R++ +K +KN ++ T + +E + PKI L+ ++ + N
Sbjct: 38 RYSRSREREKKSYKNENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNN 96
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 5.9
Identities = 11/59 (18%), Positives = 24/59 (40%)
Frame = -2
Query: 241 RWAMISGEQKSEFKNSELKSRFSFTGIPKVIPTVXKESTNSPKIFILLTQISVREHTKN 65
R++ +K +KN ++ T + +E + PKI L+ ++ + N
Sbjct: 38 RYSRSREREKKSYKNENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNN 96
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.8 bits (44), Expect = 5.9
Identities = 11/59 (18%), Positives = 24/59 (40%)
Frame = -2
Query: 241 RWAMISGEQKSEFKNSELKSRFSFTGIPKVIPTVXKESTNSPKIFILLTQISVREHTKN 65
R++ +K +KN ++ T + +E + PKI L+ ++ + N
Sbjct: 271 RYSRSREREKKSYKNENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNN 329
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.4 bits (43), Expect = 7.8
Identities = 12/52 (23%), Positives = 24/52 (46%)
Frame = -2
Query: 220 EQKSEFKNSELKSRFSFTGIPKVIPTVXKESTNSPKIFILLTQISVREHTKN 65
EQ+S +KN ++ T + + +E + PKI L+ ++ + N
Sbjct: 279 EQRS-YKNENSYRKYRETSKERSRDRIERERSREPKIISSLSNNTIHNNNYN 329
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.4 bits (43), Expect = 7.8
Identities = 12/43 (27%), Positives = 18/43 (41%)
Frame = +3
Query: 84 TDIWVSNMKIFGLLVLSFXTVGITFGIPVNENLDFNSEFLNSD 212
TD+WV +K F + + F T G + S+ L D
Sbjct: 155 TDVWVELLKHFNYMKVIFIHSSDTDGRALLGRFQTTSQNLEDD 197
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,930
Number of Sequences: 438
Number of extensions: 4388
Number of successful extensions: 25
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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