Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0604
(647 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g08030.1 68418.m00934 glycerophosphoryl diester phosphodieste... 126 2e-29
At1g74210.1 68414.m08595 glycerophosphoryl diester phosphodieste... 119 1e-27
At1g66970.1 68414.m07615 glycerophosphoryl diester phosphodieste... 60 9e-10
At1g66980.1 68414.m07616 protein kinase family protein / glycero... 52 3e-07
At5g58050.1 68418.m07265 glycerophosphoryl diester phosphodieste... 51 6e-07
At4g26690.1 68417.m03846 glycerophosphoryl diester phosphodieste... 50 2e-06
At5g58170.1 68418.m07281 glycerophosphoryl diester phosphodieste... 48 4e-06
At5g55480.1 68418.m06910 glycerophosphoryl diester phosphodieste... 45 4e-05
At1g71340.1 68414.m08234 glycerophosphoryl diester phosphodieste... 41 6e-04
At3g20520.1 68416.m02598 glycerophosphoryl diester phosphodieste... 38 0.004
At5g43300.1 68418.m05292 glycerophosphoryl diester phosphodieste... 29 2.0
At4g25230.2 68417.m03631 zinc finger (C3HC4-type RING finger) fa... 29 2.0
At4g25230.1 68417.m03630 zinc finger (C3HC4-type RING finger) fa... 29 2.0
At5g51450.1 68418.m06378 zinc finger (C3HC4-type RING finger) fa... 29 2.7
At3g50720.1 68416.m05549 protein kinase, putative similar to pro... 29 2.7
At4g32940.1 68417.m04687 vacuolar processing enzyme gamma / gamm... 28 4.7
At2g28110.1 68415.m03415 exostosin family protein contains 1 tra... 28 4.7
At5g09410.1 68418.m01090 calmodulin-binding protein similar to a... 27 8.1
>At5g08030.1 68418.m00934 glycerophosphoryl diester
phosphodiesterase family protein similar to
glycerophosphodiester phosphodiesterase [Borrelia
hermsii] GI:1399038; contains Pfam profile PF03009:
Glycerophosphoryl diester phosphodiesterase family
Length = 372
Score = 126 bits (303), Expect = 2e-29
Identities = 68/142 (47%), Positives = 89/142 (62%)
Frame = +3
Query: 222 PLIIAHRGASGYVPEHTLGSYALSITMGADYIEPDLVMTKDGVLVARHDNELSLTTDVAS 401
P +AHRG++G +PE T +Y +I GAD+IE D++ +KDGVL+ HD L TTDVA
Sbjct: 44 PYNLAHRGSNGELPEETAPAYMRAIEEGADFIETDILSSKDGVLICHHDVNLDDTTDVAD 103
Query: 402 RIEFATRNRTQTVDGSAITGWFTEDFTLAEIKTLRARERIPDIRAGNARMDGTFTIPTFQ 581
EFA R RT V G +TG+FT DFTL E+KTL A++R P + + +G F I TF
Sbjct: 104 HKEFADRKRTYEVQGMNMTGFFTVDFTLKELKTLGAKQRYP---FRDQQYNGKFPIITFD 160
Query: 582 EIISLAKGLQKSHKRTIGIYPE 647
E IS+A R +GIYPE
Sbjct: 161 EYISIA----LDAPRVVGIYPE 178
>At1g74210.1 68414.m08595 glycerophosphoryl diester
phosphodiesterase family protein low similarity to
glycerophosphodiester phosphodiesterase [Borrelia
hermsii] GI:1399038; contains Pfam profile PF03009:
Glycerophosphoryl diester phosphodiesterase family
Length = 392
Score = 119 bits (287), Expect = 1e-27
Identities = 64/142 (45%), Positives = 89/142 (62%)
Frame = +3
Query: 222 PLIIAHRGASGYVPEHTLGSYALSITMGADYIEPDLVMTKDGVLVARHDNELSLTTDVAS 401
P IAHRG++G +PE T +Y +I G D+IE D++ +KDGVL+ HD L TT+VAS
Sbjct: 44 PYNIAHRGSNGEIPEETTAAYLKAIEEGTDFIETDILSSKDGVLICFHDCILDETTNVAS 103
Query: 402 RIEFATRNRTQTVDGSAITGWFTEDFTLAEIKTLRARERIPDIRAGNARMDGTFTIPTFQ 581
EFA R RT V G ITG+FT DFTL E+K LR ++R + + +G + I TF+
Sbjct: 104 HKEFADRKRTYDVQGFNITGFFTFDFTLKELKQLRIKQR---YAFRDQQYNGMYPIITFE 160
Query: 582 EIISLAKGLQKSHKRTIGIYPE 647
E +++A + R +GIYPE
Sbjct: 161 EFLTIA----RDAPRVVGIYPE 178
>At1g66970.1 68414.m07615 glycerophosphoryl diester
phosphodiesterase family protein contains Pfam PF03009 :
Glycerophosphoryl diester phosphodiesterase family
Length = 763
Score = 60.5 bits (140), Expect = 9e-10
Identities = 42/134 (31%), Positives = 73/134 (54%), Gaps = 3/134 (2%)
Frame = +3
Query: 201 LNSDFCSPLIIAHRGASGYVPEHTLGSYALS-ITMGADYIE-PDLVMTKDGVLVARHDNE 374
LN D +PL+IA G SG P+ ++ +Y L+ +T AD + DL +TKDG+ + D
Sbjct: 45 LNGD--APLVIARGGFSGLYPDSSIAAYQLATLTSVADVVLWCDLQLTKDGLGICFPDLN 102
Query: 375 LSLTTDVASRIEFATRNRTQTVDGSAITGWFTEDFTLAEIKTLRARERIPDIRAGNARMD 554
L+ + + R+ + R ++ +V+G GWF DF+L E++ I I + R D
Sbjct: 103 LANASTI-DRV-YPNREKSYSVNGVTTKGWFPNDFSLTELQNFLL---IRGILSRTDRFD 157
Query: 555 GT-FTIPTFQEIIS 593
G + I T +++++
Sbjct: 158 GNGYLISTIEDVVT 171
Score = 40.3 bits (90), Expect = 0.001
Identities = 29/93 (31%), Positives = 45/93 (48%)
Frame = +3
Query: 225 LIIAHRGASGYVPEHTLGSYALSITMGADYIEPDLVMTKDGVLVARHDNELSLTTDVASR 404
L+I+ GASG P T +Y +I GAD I+ + M+ DGV + L +A+
Sbjct: 367 LVISKDGASGDYPGCTDLAYEKAIKDGADVIDCSVQMSSDGVPFCL--RSIDLRNSIAAL 424
Query: 405 IEFATRNRTQTVDGSAITGWFTEDFTLAEIKTL 503
+ T + S++ G FT T EI++L
Sbjct: 425 QNTFSNRSTSVPEISSVPGIFTFSLTWPEIQSL 457
>At1g66980.1 68414.m07616 protein kinase family protein /
glycerophosphoryl diester phosphodiesterase family
protein similar to leaf rust resistance kinase Lr10
GI:1680685 from [Triticum aestivum]; contains Pfam
profiles PF03009: Glycerophosphoryl diester
phosphodiesterase family, PF00069: Protein kinase domain
Length = 1109
Score = 52.0 bits (119), Expect = 3e-07
Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 3/131 (2%)
Frame = +3
Query: 219 SPLIIAHRGASGYVPEHTLGSYALSITMG-ADYIE-PDLVMTKDGVLVARHDNELSLTTD 392
+PL+IA G SG P+ +L +Y ++ + AD + D+ +TKDG + D L+L
Sbjct: 50 APLVIARGGFSGLFPDSSLAAYQFAMVVSVADVVLWCDVQLTKDGHGICFPD--LNLANA 107
Query: 393 VASRIEFATRNRTQTVDGSAITGWFTEDFTLAEI-KTLRARERIPDIRAGNARMDGTFTI 569
S + R ++ V+G GWF DF+L E+ K L + R R+G +G ++I
Sbjct: 108 SNSEEVYPNRQKSYPVNGVTTKGWFPIDFSLTELQKVLFSLIRGILSRSGKFDENG-YSI 166
Query: 570 PTFQEIISLAK 602
T Q + + K
Sbjct: 167 STVQNVATQMK 177
Score = 40.7 bits (91), Expect = 8e-04
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Frame = +3
Query: 225 LIIAHRGASGYVPEHTLGSYALSITMGADYIEPDLVMTKDGVLVARHDNELSLTTDVASR 404
L+I+ GASG P T +Y +I G+D I+ + M+ DG+ +L +T V
Sbjct: 370 LVISKNGASGEYPGCTKLAYEKAIKDGSDVIDCPVQMSSDGIPFCSSSIDLVNSTTVG-- 427
Query: 405 IEFATRNRTQTV-DGSAITGWFTEDFTLAEIKTL 503
+ RNR+ V + S++ G FT T EI++L
Sbjct: 428 -QTHLRNRSIIVPEISSVAGIFTFSLTWHEIQSL 460
>At5g58050.1 68418.m07265 glycerophosphoryl diester
phosphodiesterase family protein contains Pfam PF03009 :
Glycerophosphoryl diester phosphodiesterase family;
similar to Glycerophosphoryl diester phosphodiesterase
precursor (Glycerophosphodiester phosphodiesterase)
(Surface-exposed lipoprotein D) (Protein D)
(ImmunoglobulinD-binding protein) (IGD-binding protein)
(SP:Q06282) {Haemophilus influenzae}
Length = 753
Score = 51.2 bits (117), Expect = 6e-07
Identities = 36/108 (33%), Positives = 54/108 (50%)
Frame = +3
Query: 225 LIIAHRGASGYVPEHTLGSYALSITMGADYIEPDLVMTKDGVLVARHDNELSLTTDVASR 404
L+I H GASG P T +Y +I GAD I+ + M+KDG+ +LS +T +R
Sbjct: 356 LVITHNGASGDYPGCTDLAYQKAIDDGADIIDCSVQMSKDGIAFCHDAADLSAST--TAR 413
Query: 405 IEFATRNRTQTVDGSAITGWFTEDFTLAEIKTLRARERIPDIRAGNAR 548
F +R T + G F+ D T AEI++++ + P G R
Sbjct: 414 TTFMSR-ATSVPEIQPTNGIFSFDLTWAEIQSVKPQIENPFTATGFQR 460
Score = 44.4 bits (100), Expect = 7e-05
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Frame = +3
Query: 222 PLIIAHRGASGYVPEHTLGSYALSITMGADYIEP--DLVMTKDGVLVARHDNELSLTTDV 395
P ++A G SG PE ++ + L+I + +L MTKDGV + D L T +
Sbjct: 41 PAVVARGGFSGLFPESSISANDLAIGTSSPGFTMLCNLQMTKDGVGLCLSDIRLDNATTI 100
Query: 396 ASRIEFATRNRTQTVDGSAITGWFTEDF 479
+S F +T V+G + GWF D+
Sbjct: 101 SS--VFPKAQKTYKVNGQDLKGWFVIDY 126
>At4g26690.1 68417.m03846 glycerophosphoryl diester
phosphodiesterase family protein weak similarity to
glycerophosphodiester phosphodiesterase [Borrelia
hermsii] GI:1399038; contains Pfam profile PF03009:
Glycerophosphoryl diester phosphodiesterase family
Length = 759
Score = 49.6 bits (113), Expect = 2e-06
Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Frame = +3
Query: 222 PLIIAHRGASGYVPEHTLGSYALSITMGAD--YIEPDLVMTKDGVLVARHDNELSLTTDV 395
PL+IA G SG P+ + +Y +I + D+ +TKD + + D L++
Sbjct: 44 PLVIARGGFSGLFPDSSYDAYNFAILTSVPDAVLWCDVQLTKDALGICFPD--LTMRNSS 101
Query: 396 ASRIEFATRNRTQTVDGSAITGWFTEDFTLAEIKTLRARERIPDIRAGNARMDGTFT-IP 572
+ + TR ++ V+G +GWFT DF+L ++K + I I + + + DG I
Sbjct: 102 SIEAVYPTRQKSYPVNGVPTSGWFTIDFSLKDLKDVNL---IRGILSRSEKFDGNSNPIM 158
Query: 573 TFQEIISLAK 602
T Q + + K
Sbjct: 159 TVQSVSTQMK 168
Score = 39.9 bits (89), Expect = 0.001
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Frame = +3
Query: 225 LIIAHRGASGYVPEHTLGSYALSITMGADYIEPDLVMTKDGVLVARHDNELSLTTDVASR 404
L+I GASG P T +Y +I GAD I+ + ++ DG +L +T V+
Sbjct: 361 LVITKDGASGDYPGCTDLAYKKAIKDGADVIDCSVQLSSDGTPFCLSSIDLGNSTTVSLT 420
Query: 405 IEFATRNRTQTV-DGSAITGWFTEDFTLAEIKTL 503
A RNR+ TV + ++ +T T AEI+TL
Sbjct: 421 ---AFRNRSTTVPELGSLGAIYTFSLTWAEIQTL 451
>At5g58170.1 68418.m07281 glycerophosphoryl diester
phosphodiesterase family protein contains Pfam PF03009 :
Glycerophosphoryl diester phosphodiesterase family;
similar to Glycerophosphoryl diester phosphodiesterase
precursor (Glycerophosphodiester phosphodiesterase)
(Surface-exposed lipoprotein D) (Protein D)
(ImmunoglobulinD-binding protein) (IGD-binding protein)
(SP:Q06282) {Haemophilus influenzae}
Length = 750
Score = 48.4 bits (110), Expect = 4e-06
Identities = 35/108 (32%), Positives = 52/108 (48%)
Frame = +3
Query: 225 LIIAHRGASGYVPEHTLGSYALSITMGADYIEPDLVMTKDGVLVARHDNELSLTTDVASR 404
L+I H GASG P T +Y ++ GAD I+ + M+KDG+ HD LT +
Sbjct: 356 LVITHNGASGDYPGCTDLAYQKAVDDGADVIDCSVQMSKDGIAFC-HD-AADLTASTTAM 413
Query: 405 IEFATRNRTQTVDGSAITGWFTEDFTLAEIKTLRARERIPDIRAGNAR 548
F +R T + G F+ D T AEI++++ + P G R
Sbjct: 414 TIFMSR-ATSVPEIQPTNGIFSFDLTWAEIQSVKPQIENPFTATGFQR 460
Score = 42.7 bits (96), Expect = 2e-04
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Frame = +3
Query: 222 PLIIAHRGASGYVPEHTLGSYALSITMGADYIEP--DLVMTKDGVLVARHDNELSLTTDV 395
P ++A G SG PE + + L+I + + +L MTKDGV + D L T +
Sbjct: 41 PAVVARGGFSGLFPESSASANDLAIGTSSPGLTMLCNLQMTKDGVGLCLSDIILDNATTI 100
Query: 396 ASRIEFATRNRTQTVDGSAITGWFTEDF 479
+S F +T V+G + GWF D+
Sbjct: 101 SS--VFPKAQKTYKVNGQDLKGWFVLDY 126
>At5g55480.1 68418.m06910 glycerophosphoryl diester
phosphodiesterase family protein contains Pfam PF03009 :
Glycerophosphoryl diester phosphodiesterase family;
similar to Glycerophosphoryl diester phosphodiesterase
precursor (Glycerophosphodiester phosphodiesterase)
(Surface-exposed lipoprotein D) (Protein D)
(ImmunoglobulinD-binding protein) (IGD-binding protein)
(SP:Q06282) {Haemophilus influenzae}
Length = 766
Score = 45.2 bits (102), Expect = 4e-05
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Frame = +3
Query: 225 LIIAHRGASGYVPEHTLGSYALSITMGADYIEPDLVMTKDGVLVARHDNELSLTTDVASR 404
L+I+ GASG P T +Y +I GAD I+ L M+ DG+ L +T+V
Sbjct: 366 LVISKNGASGDYPGCTDLAYTKAIKDGADVIDCSLQMSSDGIPFCLSSINLGESTNV--- 422
Query: 405 IEFATRNRTQTV-DGSAITGWFTEDFTLAEIKTLR 506
++ RNR+ TV + ++ G ++ +EI+TLR
Sbjct: 423 VQSPFRNRSTTVPEIGSLPGIYSFSLAWSEIQTLR 457
Score = 40.3 bits (90), Expect = 0.001
Identities = 30/131 (22%), Positives = 65/131 (49%), Gaps = 3/131 (2%)
Frame = +3
Query: 219 SPLIIAHRGASGYVPEHTLGSYAL--SITMGADYIEPDLVMTKDGVLVARHDNELSLTTD 392
+PL+IA G SG +P+ +L +Y+ ++ + D+ +TKD + + D ++ ++
Sbjct: 49 APLVIARGGFSGLLPDSSLDAYSFVSQTSVPGAVLWCDVQLTKDAIGLCFPDVKMMNASN 108
Query: 393 VASRIEFATRNRTQTVDGSAITGWFTEDFTLAEIKTLRARERIPDIRAGNARMDG-TFTI 569
+ + R + ++G WFT DF ++ + ++ I + +A DG ++ I
Sbjct: 109 IQD--VYPKRKTSYLLNGVPTQDWFTIDFNFKDLTKVILKQ---GILSRSAAFDGNSYGI 163
Query: 570 PTFQEIISLAK 602
T ++I + K
Sbjct: 164 STVKDISTQLK 174
>At1g71340.1 68414.m08234 glycerophosphoryl diester
phosphodiesterase family protein contains Pfam profile
PF03009: Glycerophosphoryl diester phosphodiesterase
family
Length = 328
Score = 41.1 bits (92), Expect = 6e-04
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +3
Query: 222 PLIIAHRGASGYVPEHTLGSYALSITMGADYIEPDLVMTKDGVLVARHDNEL 377
PL+ AH G S +T+ +Y+ +I D IE D+ + DGVL A H+ +L
Sbjct: 73 PLVCAHGGDSTLAFPNTMDAYSFAIRSRVDCIEVDVSRSSDGVLFALHNRDL 124
>At3g20520.1 68416.m02598 glycerophosphoryl diester
phosphodiesterase family protein contains Pfam PF03009 :
Glycerophosphoryl diester phosphodiesterase family;
similar to glycerophosphodiester phosphodiesterase
(GI:1399038) [Borrelia hermsii]
Length = 729
Score = 38.3 bits (85), Expect = 0.004
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Frame = +3
Query: 228 IIAHRGASGYVPEHTLGSYALSITMGADYIEPDLVMTKDGVLVARHDNELSLTTDVASRI 407
II+ GASG P T +Y + + GAD ++ ++ M+KD + +L +T+V I
Sbjct: 339 IISKNGASGDFPGCTDLAYQRAASDGADILDCNVQMSKDKIPFCMSSFDLINSTNV---I 395
Query: 408 EFATRNRTQTVD--GSAITGWFTEDFTLAEIKTLR 506
E + RN + V +G +T T+++I+TL+
Sbjct: 396 ETSFRNLSSVVSEINPRRSGIYTFSLTMSQIQTLK 430
>At5g43300.1 68418.m05292 glycerophosphoryl diester
phosphodiesterase family protein contains Pfam profile
PF03009: Glycerophosphoryl diester phosphodiesterase
family
Length = 333
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +3
Query: 255 YVPEHTLGSYALSITMGADYIEPDLVMTKDGVLVARHD 368
++ E++L S+ ++ D+IE D+ +T+DG V HD
Sbjct: 20 FIKENSLLSFNVAADFPIDFIEFDVQVTRDGCPVIFHD 57
>At4g25230.2 68417.m03631 zinc finger (C3HC4-type RING finger)
family protein similar to autocrine motility factor
receptor [Mus musculus] GI:5931953; contains Pfam
profiles PF00097: Zinc finger, C3HC4 type (RING finger),
PF02845: CUE domain
Length = 578
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = -1
Query: 599 RQTNDFLKRRNREGAIHTCVASSDIWYAFSSS*RFYFGQCKIFREPTGDSRSVHC 435
++ ++K R GA+H + A S R Y +C I REP ++ +HC
Sbjct: 303 KRIKGYIKLRIALGALHAALPD-----ATSEELRAYDDECAICREPMAKAKRLHC 352
>At4g25230.1 68417.m03630 zinc finger (C3HC4-type RING finger)
family protein similar to autocrine motility factor
receptor [Mus musculus] GI:5931953; contains Pfam
profiles PF00097: Zinc finger, C3HC4 type (RING finger),
PF02845: CUE domain
Length = 578
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = -1
Query: 599 RQTNDFLKRRNREGAIHTCVASSDIWYAFSSS*RFYFGQCKIFREPTGDSRSVHC 435
++ ++K R GA+H + A S R Y +C I REP ++ +HC
Sbjct: 303 KRIKGYIKLRIALGALHAALPD-----ATSEELRAYDDECAICREPMAKAKRLHC 352
>At5g51450.1 68418.m06378 zinc finger (C3HC4-type RING finger)
family protein contains similarity to autocrine motility
factor receptor [Mus musculus] GI:5931953; contains Pfam
profiles PF00097: Zinc finger, C3HC4 type (RING finger),
PF02845: CUE domain
Length = 577
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = -1
Query: 599 RQTNDFLKRRNREGAIHTCVASSDIWYAFSSS*RFYFGQCKIFREPTGDSRSVHC 435
++ ++K R GA+H + A S R Y +C I REP ++ +HC
Sbjct: 303 KRIKGYIKLRVALGALHAALLD-----ATSEELRDYDDECAICREPMAKAKRLHC 352
>At3g50720.1 68416.m05549 protein kinase, putative similar to
protein kinase ATN1 [Arabidopsis thaliana]
gi|1054633|emb|CAA63387
Length = 377
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +1
Query: 523 QISELATHVWMAPSRFLRFKKSLVWRKVCKKVTKELLEFIQ 645
+I EL T W+ P R+++ KK +K+ + V K++L F +
Sbjct: 334 EIEELET-TWLLPKRYIKLKKP---KKIKQNVMKKILPFFK 370
>At4g32940.1 68417.m04687 vacuolar processing enzyme gamma /
gamma-VPE nearly identical to SP|Q39119 Vacuolar
processing enzyme, gamma-isozyme precursor (EC 3.4.22.-)
(Gamma-VPE) {Arabidopsis thaliana}
Length = 494
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +2
Query: 14 DICHRYQLHRSV*FSDSIFCVFSHGYLG*QYENLR 118
DICH YQL R + VF + + YEN R
Sbjct: 78 DICHAYQLLRKGGLKEENIVVFMYDDIANNYENPR 112
>At2g28110.1 68415.m03415 exostosin family protein contains 1
transmembrane domain; similar to
pectin-glucuronyltransferase (GI:23821292) [Nicotiana
plumbaginifolia]; similar to NpGUT1 homolog
(GI:23821294) [Arabidopsis thaliana]; contains Pfam
profile PF03016: Exostosin family
Length = 448
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = -1
Query: 581 LKRRNREGAIHTCVASSDIWYAFSSS*RFYFGQCKIFREPTGDSRSVHCLSPV 423
L +N G ++ ++IW ++ RFY + + + +RSV CL P+
Sbjct: 283 LHPKNISGRFYSKRVRTNIWRSYGGDRRFYLQRQRFAGYQSEIARSVFCLCPL 335
>At5g09410.1 68418.m01090 calmodulin-binding protein similar to
anther ethylene-upregulated calmodulin-binding protein
ER1 GI:11612392 from [Nicotiana tabacum]
Length = 1007
Score = 27.5 bits (58), Expect = 8.1
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 6/75 (8%)
Frame = +3
Query: 237 HRGASGYVPEHTLGSYALSITMGADYIEPDLVMTKDGVLVARHDNELSLT-TDVASRIEF 413
HRG SG++ E +L SY +T+ + P + V +T DV ++
Sbjct: 697 HRGISGFLAESSLTSYLEKLTVDSKENSPANSCGEKAVQTVSERTAAPMTYGDVPEKLSL 756
Query: 414 -----ATRNRTQTVD 443
A RN TQ D
Sbjct: 757 KDSLTAVRNATQAAD 771
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,619,754
Number of Sequences: 28952
Number of extensions: 318572
Number of successful extensions: 830
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1344285648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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