Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0603
         (695 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   5.5  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   5.5  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   7.3  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   9.6  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +3

Query: 405 SVKIFSKNLQHFLKKKFFHLRNFN*WFYQFI 497
           S+K   +N  H+++   F L   N  FY F+
Sbjct: 149 SIKPKERNSNHWVRSGLFALITGNVLFYPFL 179


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +3

Query: 405 SVKIFSKNLQHFLKKKFFHLRNFN*WFYQFI 497
           S+K   +N  H+++   F L   N  FY F+
Sbjct: 105 SIKPKERNSNHWVRSGLFALITGNVLFYPFL 135


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1

Query: 571 DSTIQERMQLSSIKR 615
           D+TIQE + L  IKR
Sbjct: 322 DATIQEMLDLGVIKR 336


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/29 (24%), Positives = 17/29 (58%)
 Frame = -1

Query: 152 FIYLFYLELSAKQILLSGVYFVLSISMIL 66
           F Y +Y     K  + + ++F++ +S++L
Sbjct: 272 FCYCYYNSKMTKDGVYNTLFFIVYVSLLL 300


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,558
Number of Sequences: 336
Number of extensions: 3258
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)