Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0603
         (695 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X69090-1|CAA48833.1| 1451|Homo sapiens 190kD protein protein.          32   1.7  
BC116183-1|AAI16184.1| 1589|Homo sapiens myomesin 1, 185kDa prot...    32   1.7  
AK125322-1|BAC86128.1| 1685|Homo sapiens protein ( Homo sapiens ...    32   1.7  
AJ621424-1|CAF18565.1| 1685|Homo sapiens myomesin 1 protein.           32   1.7  
BC127003-1|AAI27004.1|  868|Homo sapiens zinc finger protein 28 ...    31   5.2  
BC127002-1|AAI27003.1|  868|Homo sapiens zinc finger protein 28 ...    31   5.2  
AF507045-1|AAM28892.1|  868|Homo sapiens zinc finger protein 28 ...    31   5.2  
AB037852-1|BAA92669.1|  891|Homo sapiens KIAA1431 protein protein.     31   5.2  

>X69090-1|CAA48833.1| 1451|Homo sapiens 190kD protein protein.
          Length = 1451

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
 Frame = -3

Query: 405  LSWEVNSECNV---CT*SIILNSTYIAFYKVFRVLESNER 295
            LSWEV  ECNV   C  + I   T+I +YK  R +  +E+
Sbjct: 1130 LSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEK 1169


>BC116183-1|AAI16184.1| 1589|Homo sapiens myomesin 1, 185kDa protein.
          Length = 1589

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
 Frame = -3

Query: 405  LSWEVNSECNV---CT*SIILNSTYIAFYKVFRVLESNER 295
            LSWEV  ECNV   C  + I   T+I +YK  R +  +E+
Sbjct: 1268 LSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEK 1307


>AK125322-1|BAC86128.1| 1685|Homo sapiens protein ( Homo sapiens cDNA
            FLJ43332 fis, clone NT2RI3006340, highly  similar to
            Myomesin 1. ).
          Length = 1685

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
 Frame = -3

Query: 405  LSWEVNSECNV---CT*SIILNSTYIAFYKVFRVLESNER 295
            LSWEV  ECNV   C  + I   T+I +YK  R +  +E+
Sbjct: 1364 LSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEK 1403


>AJ621424-1|CAF18565.1| 1685|Homo sapiens myomesin 1 protein.
          Length = 1685

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
 Frame = -3

Query: 405  LSWEVNSECNV---CT*SIILNSTYIAFYKVFRVLESNER 295
            LSWEV  ECNV   C  + I   T+I +YK  R +  +E+
Sbjct: 1364 LSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEK 1403


>BC127003-1|AAI27004.1|  868|Homo sapiens zinc finger protein 28
           homolog (mouse) protein.
          Length = 868

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +3

Query: 204 IKNTNMISLPKILNVTECKKTYLNR*RRSKSVHYFL-TPEKPYK 332
           IK T + +  K+    ECKKT+      S +VH  + T EKPYK
Sbjct: 408 IKQTGIYAGKKLFKCNECKKTFTQ--SSSLTVHQRIHTGEKPYK 449


>BC127002-1|AAI27003.1|  868|Homo sapiens zinc finger protein 28
           homolog (mouse) protein.
          Length = 868

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +3

Query: 204 IKNTNMISLPKILNVTECKKTYLNR*RRSKSVHYFL-TPEKPYK 332
           IK T + +  K+    ECKKT+      S +VH  + T EKPYK
Sbjct: 408 IKQTGIYAGKKLFKCNECKKTFTQ--SSSLTVHQRIHTGEKPYK 449


>AF507045-1|AAM28892.1|  868|Homo sapiens zinc finger protein 28
           protein.
          Length = 868

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +3

Query: 204 IKNTNMISLPKILNVTECKKTYLNR*RRSKSVHYFL-TPEKPYK 332
           IK T + +  K+    ECKKT+      S +VH  + T EKPYK
Sbjct: 408 IKQTGIYAGKKLFKCNECKKTFTQ--SSSLTVHQRIHTGEKPYK 449


>AB037852-1|BAA92669.1|  891|Homo sapiens KIAA1431 protein protein.
          Length = 891

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +3

Query: 204 IKNTNMISLPKILNVTECKKTYLNR*RRSKSVHYFL-TPEKPYK 332
           IK T + +  K+    ECKKT+      S +VH  + T EKPYK
Sbjct: 431 IKQTGIYAGKKLFKCNECKKTFTQ--SSSLTVHQRIHTGEKPYK 472


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,332,204
Number of Sequences: 237096
Number of extensions: 1474206
Number of successful extensions: 1722
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1722
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)