Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0603
         (695 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113222-1|AAM29227.1|  677|Drosophila melanogaster AT09218p pro...    29   6.0  
AE013599-3456|AAM71116.1|  422|Drosophila melanogaster CG30275-P...    29   6.0  
AE013599-3455|AAO41345.1|  677|Drosophila melanogaster CG30275-P...    29   6.0  
AE013599-3454|AAM71115.1| 1114|Drosophila melanogaster CG30275-P...    29   6.0  
AE013599-3453|AAM71114.1| 1127|Drosophila melanogaster CG30275-P...    29   6.0  

>AY113222-1|AAM29227.1|  677|Drosophila melanogaster AT09218p
           protein.
          Length = 677

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -3

Query: 381 CNVCT*SIILNSTYIAFYKVFRVLESNERSYCVFIY 274
           CN+   +  LN  ++ FYKV  +LE   R+Y V +Y
Sbjct: 316 CNLVEINFRLNK-FLLFYKVRALLEDMPRTYLVLVY 350


>AE013599-3456|AAM71116.1|  422|Drosophila melanogaster CG30275-PB,
           isoform B protein.
          Length = 422

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -3

Query: 381 CNVCT*SIILNSTYIAFYKVFRVLESNERSYCVFIY 274
           CN+   +  LN  ++ FYKV  +LE   R+Y V +Y
Sbjct: 61  CNLVEINFRLNK-FLLFYKVRALLEDMPRTYLVLVY 95


>AE013599-3455|AAO41345.1|  677|Drosophila melanogaster CG30275-PD,
           isoform D protein.
          Length = 677

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -3

Query: 381 CNVCT*SIILNSTYIAFYKVFRVLESNERSYCVFIY 274
           CN+   +  LN  ++ FYKV  +LE   R+Y V +Y
Sbjct: 316 CNLVEINFRLNK-FLLFYKVRALLEDMPRTYLVLVY 350


>AE013599-3454|AAM71115.1| 1114|Drosophila melanogaster CG30275-PC,
           isoform C protein.
          Length = 1114

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -3

Query: 381 CNVCT*SIILNSTYIAFYKVFRVLESNERSYCVFIY 274
           CN+   +  LN  ++ FYKV  +LE   R+Y V +Y
Sbjct: 753 CNLVEINFRLNK-FLLFYKVRALLEDMPRTYLVLVY 787


>AE013599-3453|AAM71114.1| 1127|Drosophila melanogaster CG30275-PA,
           isoform A protein.
          Length = 1127

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -3

Query: 381 CNVCT*SIILNSTYIAFYKVFRVLESNERSYCVFIY 274
           CN+   +  LN  ++ FYKV  +LE   R+Y V +Y
Sbjct: 766 CNLVEINFRLNK-FLLFYKVRALLEDMPRTYLVLVY 800


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,127,831
Number of Sequences: 53049
Number of extensions: 431349
Number of successful extensions: 691
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 691
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)