Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0603
         (695 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CU457740-5|CAM36335.1|  361|Caenorhabditis elegans Hypothetical ...    30   1.4  
AF022972-2|AAC48242.1|  346|Caenorhabditis elegans Seven tm rece...    28   7.3  
Z80789-4|CAC35816.1|  350|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z69788-9|CAC35811.1|  350|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z69788-6|CAD44118.1|  324|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z69788-5|CAD44117.1|  314|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z69788-4|CAA93647.1|  341|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z69788-3|CAA93648.1|  300|Caenorhabditis elegans Hypothetical pr...    27   9.7  
AC024882-17|AAF60937.1|  321|Caenorhabditis elegans Serpentine r...    27   9.7  

>CU457740-5|CAM36335.1|  361|Caenorhabditis elegans Hypothetical
           protein C50E10.5 protein.
          Length = 361

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
 Frame = +3

Query: 468 NFN*WFYQFIL*LK--TQILAVYVLILTVEILRKLQ*FHYTRKNAIIF 605
           N+N  FY+F+L L+    I A   +I+TV I+ K + FH    + IIF
Sbjct: 23  NYNSNFYRFLLLLEFILSIFAGIFIIVTVFIISKTRAFHNNLTSLIIF 70


>AF022972-2|AAC48242.1|  346|Caenorhabditis elegans Seven tm
           receptor protein 112 protein.
          Length = 346

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 9/55 (16%)
 Frame = +3

Query: 294 SVHYFLTPEKPY-KMLCRYYLK*YFK--------YIRYIHY*LPNSSVKIFSKNL 431
           SV YFL P+  Y +    Y LK +++        YI Y++Y   N    I+ KNL
Sbjct: 148 SVSYFLYPDTEYTEAAVTYVLKTHYEVIKKENVSYIAYVYYQYENGERHIYIKNL 202


>Z80789-4|CAC35816.1|  350|Caenorhabditis elegans Hypothetical
           protein F09A5.4c protein.
          Length = 350

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 506 KNTNFSCICFNIDGRNIT*ITMIP 577
           K+++  C+C +IDG  +  IT +P
Sbjct: 112 KSSDLMCVCDSIDGNTVAKITSLP 135


>Z69788-9|CAC35811.1|  350|Caenorhabditis elegans Hypothetical
           protein F09A5.4c protein.
          Length = 350

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 506 KNTNFSCICFNIDGRNIT*ITMIP 577
           K+++  C+C +IDG  +  IT +P
Sbjct: 112 KSSDLMCVCDSIDGNTVAKITSLP 135


>Z69788-6|CAD44118.1|  324|Caenorhabditis elegans Hypothetical
           protein F09A5.4e protein.
          Length = 324

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 506 KNTNFSCICFNIDGRNIT*ITMIP 577
           K+++  C+C +IDG  +  IT +P
Sbjct: 86  KSSDLMCVCDSIDGNTVAKITSLP 109


>Z69788-5|CAD44117.1|  314|Caenorhabditis elegans Hypothetical
           protein F09A5.4d protein.
          Length = 314

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 506 KNTNFSCICFNIDGRNIT*ITMIP 577
           K+++  C+C +IDG  +  IT +P
Sbjct: 76  KSSDLMCVCDSIDGNTVAKITSLP 99


>Z69788-4|CAA93647.1|  341|Caenorhabditis elegans Hypothetical
           protein F09A5.4b protein.
          Length = 341

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 506 KNTNFSCICFNIDGRNIT*ITMIP 577
           K+++  C+C +IDG  +  IT +P
Sbjct: 103 KSSDLMCVCDSIDGNTVAKITSLP 126


>Z69788-3|CAA93648.1|  300|Caenorhabditis elegans Hypothetical
           protein F09A5.4a protein.
          Length = 300

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 506 KNTNFSCICFNIDGRNIT*ITMIP 577
           K+++  C+C +IDG  +  IT +P
Sbjct: 62  KSSDLMCVCDSIDGNTVAKITSLP 85


>AC024882-17|AAF60937.1|  321|Caenorhabditis elegans Serpentine
           receptor, class z protein28 protein.
          Length = 321

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = -1

Query: 212 IFYFEFTQTLKSLYEISYLKFIYLFYLELSAKQILLSGVYFV 87
           +FYF  ++     ++  ++K+I   Y    +K+IL  G+Y V
Sbjct: 123 LFYFPSSERSSIKFQKLFIKYINYVYTVFVSKEILTIGLYAV 164


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,698,283
Number of Sequences: 27780
Number of extensions: 272076
Number of successful extensions: 500
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 500
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)