Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0601
(682 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003140-9|AAB54171.1| 86|Caenorhabditis elegans Acyl-coenzyme... 93 2e-19
Z46794-8|CAA86779.1| 385|Caenorhabditis elegans Hypothetical pr... 72 4e-13
Z68004-6|CAA91987.2| 116|Caenorhabditis elegans Hypothetical pr... 52 4e-07
Z92826-2|CAB07319.1| 266|Caenorhabditis elegans Hypothetical pr... 50 1e-06
AL023828-1|CAA19448.1| 115|Caenorhabditis elegans Hypothetical ... 48 6e-06
U00063-1|AAK18960.1| 146|Caenorhabditis elegans Acyl-coenzyme a... 38 0.009
Z81120-7|CAB03343.2| 274|Caenorhabditis elegans Hypothetical pr... 37 0.012
U27312-8|AAZ32809.1| 219|Caenorhabditis elegans Hypothetical pr... 34 0.082
Z95559-11|CAB09005.2| 435|Caenorhabditis elegans Hypothetical p... 30 1.3
>AF003140-9|AAB54171.1| 86|Caenorhabditis elegans Acyl-coenzyme a
binding proteinprotein 1 protein.
Length = 86
Score = 93.1 bits (221), Expect = 2e-19
Identities = 45/79 (56%), Positives = 58/79 (73%)
Frame = +2
Query: 92 AAANVKNLKALPTDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAGTSK 271
AAA VK LK P++ +LL LYA FKQ TVGD + ++PG+ DLKGKAK+ AW + G +K
Sbjct: 8 AAATVKTLKTSPSNDELLKLYALFKQGTVGD-NTTDKPGMFDLKGKAKWSAWDEKKGLAK 66
Query: 272 EDAQKAYIEIVEGLIASIG 328
+DAQKAY+ +VE LIA G
Sbjct: 67 DDAQKAYVALVEELIAKYG 85
>Z46794-8|CAA86779.1| 385|Caenorhabditis elegans Hypothetical
protein R06F6.9 protein.
Length = 385
Score = 71.7 bits (168), Expect = 4e-13
Identities = 34/77 (44%), Positives = 50/77 (64%)
Frame = +2
Query: 89 QAAANVKNLKALPTDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAGTS 268
+A N+K LK P + L LY FKQAT GD RPG++D G+AK+DAW+ L G +
Sbjct: 31 KAQKNLKTLKEEPDNDVKLQLYGLFKQATAGDVQ-GKRPGMMDFVGRAKYDAWNTLKGQT 89
Query: 269 KEDAQKAYIEIVEGLIA 319
+++A+ Y ++V GLI+
Sbjct: 90 QDEARANYAKLVGGLIS 106
>Z68004-6|CAA91987.2| 116|Caenorhabditis elegans Hypothetical
protein F47B10.7 protein.
Length = 116
Score = 52.0 bits (119), Expect = 4e-07
Identities = 22/63 (34%), Positives = 41/63 (65%)
Frame = +2
Query: 137 QLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGLI 316
Q L Y+ FKQA++GD + +RPG+ + + K+D+W +L G S+++A++ YI+ + +
Sbjct: 29 QKLTFYSLFKQASIGDVN-TDRPGIFSIIERKKWDSWKELEGVSQDEAKERYIKALNDMF 87
Query: 317 ASI 325
I
Sbjct: 88 DKI 90
>Z92826-2|CAB07319.1| 266|Caenorhabditis elegans Hypothetical
protein C18D11.2 protein.
Length = 266
Score = 50.4 bits (115), Expect = 1e-06
Identities = 27/68 (39%), Positives = 42/68 (61%)
Frame = +2
Query: 143 LNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGLIAS 322
LN YA FKQAT G D +P D++G K++AW+KL + ++A++AY++ + I
Sbjct: 28 LNFYALFKQATHGKCD-LPKPSFYDIQGVYKWNAWNKLDNMTMDEAKQAYVDSIVQKIRE 86
Query: 323 IGLKE*KT 346
+ KE KT
Sbjct: 87 V-QKEYKT 93
>AL023828-1|CAA19448.1| 115|Caenorhabditis elegans Hypothetical
protein Y17G7B.1 protein.
Length = 115
Score = 48.0 bits (109), Expect = 6e-06
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = +2
Query: 92 AAANVKNLKALPTDAQLLNLYAHFKQATVGDA--DPANRPGLLDLKGKAKFDAWHKLAGT 265
AA ++ LK+ PTD + L LYA +KQA GD + D G+ K+ AW G
Sbjct: 18 AAEEMRRLKSEPTDRERLKLYALYKQALHGDIPNEDVYPVPAGDEVGRKKYAAWKSQKGA 77
Query: 266 SKEDAQKAYIEIVEGLIASIG 328
+ E + Y+ I E +I G
Sbjct: 78 NSEKCRADYVAIAEEMIKKYG 98
>U00063-1|AAK18960.1| 146|Caenorhabditis elegans Acyl-coenzyme a
binding proteinprotein 4 protein.
Length = 146
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/52 (30%), Positives = 31/52 (59%)
Frame = +2
Query: 143 LNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAGTSKEDAQKAYIE 298
L +Y+ +KQAT G D +P ++ + K++AW++L + +A+ Y+E
Sbjct: 33 LQMYSLYKQATSGKCDTI-QPYFFQIEQRMKWNAWNQLGNMDEAEAKAQYVE 83
>Z81120-7|CAB03343.2| 274|Caenorhabditis elegans Hypothetical
protein T12D8.3 protein.
Length = 274
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +2
Query: 140 LLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGLIA 319
+L Y +KQA G AD P + + KF++W + S+ A +AY E++ L
Sbjct: 51 ILKFYGLYKQAVEGPADSKKGPYWFETVARKKFNSWLANSQMSRSRAMEAYCELMAQLDT 110
Query: 320 S 322
S
Sbjct: 111 S 111
>U27312-8|AAZ32809.1| 219|Caenorhabditis elegans Hypothetical
protein F26A1.15 protein.
Length = 219
Score = 34.3 bits (75), Expect = 0.082
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 218 LKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGL 313
+ G K+ AW+K G +KE+A + Y+E V+ L
Sbjct: 157 INGNEKWHAWNKCRGLTKEEASEQYVEAVQKL 188
>Z95559-11|CAB09005.2| 435|Caenorhabditis elegans Hypothetical
protein Y41E3.7a protein.
Length = 435
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 143 LNLYAHFKQATVGD-ADPANRPGLLDLKGKAKFDAWHKLAGTSKEDAQKAYIEIVE 307
+ L + KQ G+ +D + G LD+ G AW +L S+++A +++ +V+
Sbjct: 51 IKLLSLSKQVQHGEISDEFDNAGWLDITGNDVNKAWRELGSLSRDEAMASFVFLVD 106
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,949,522
Number of Sequences: 27780
Number of extensions: 295327
Number of successful extensions: 641
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 637
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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