Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0597
         (574 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    25   1.3  
AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled ...    23   5.3  
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    23   9.3  

>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +3

Query: 258 SGRQRLGSAPGIAEVHGRR 314
           +GR R G  PG AE H RR
Sbjct: 318 AGRLRTGPVPGAAERHRRR 336


>AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled
           receptor 4 protein.
          Length = 426

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -1

Query: 295 AMPGAEPSRCLPLYFIYRFIKLF*ISFRLQMVLCEIS 185
           A PG E +  L       F+ L  IS    ++LCEIS
Sbjct: 235 ATPGLETAYNLFCVIAMYFLPLMIISGAYTVILCEIS 271


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = +2

Query: 143 NNCLVC**AVYYVFTNFT*HHLQTKRNSK*FNKTVNKIKR*AAAWLCPWHC*SPWA 310
           N C  C   V+ + +N T    +T+R+     ++     R A A  CP  C S W+
Sbjct: 18  NPCWDC--TVWSMASNRTVRCPRTRRSEAVMTRSTPSSPRLAQASTCPVPCSSIWS 71


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 561,306
Number of Sequences: 2352
Number of extensions: 10565
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54245403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)