Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0589
(615 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 227 7e-61
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 194 8e-51
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 175 4e-45
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 165 3e-42
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 141 8e-35
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 117 2e-27
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 101 1e-22
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 83 4e-17
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 56 5e-09
SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr ... 32 0.076
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 27 1.6
SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25 |Sch... 27 2.2
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 27 2.8
SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr... 27 2.8
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 2.8
SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr 1||... 26 3.8
SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces... 26 5.0
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 26 5.0
SPCC1450.07c |||D-amino acid oxidase |Schizosaccharomyces pombe|... 25 6.6
SPBC1711.07 |||WD repeat protein Rrb1 |Schizosaccharomyces pombe... 25 6.6
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 8.7
SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces pom... 25 8.7
SPCC24B10.17 |emp24||COPII-coated vesicle component Emp24 |Schiz... 25 8.7
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 25 8.7
SPAC30D11.01c ||SPAC56F8.01|alpha-glucosidase|Schizosaccharomyce... 25 8.7
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 227 bits (556), Expect = 7e-61
Identities = 103/138 (74%), Positives = 112/138 (81%)
Frame = +3
Query: 147 DVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE 326
DV PKT NFRALCTGEKG+GY GS FHRVIP FMLQGGDFT NGTGGKSIYG KF DE
Sbjct: 25 DVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGDFTRGNGTGGKSIYGEKFPDE 84
Query: 327 NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFG 506
NF LKH PG+LSMANAG +TNGSQFFITTV T WLDG+HVVFG V EGM+VVK++E+ G
Sbjct: 85 NFALKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKHVVFGEVTEGMDVVKKVESLG 144
Query: 507 SQSGKTSKRIVIKDCGQI 560
S SG T RIVI CG +
Sbjct: 145 SNSGATRARIVIDKCGTV 162
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 194 bits (473), Expect = 8e-51
Identities = 86/113 (76%), Positives = 97/113 (85%)
Frame = +3
Query: 156 PKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFT 335
PKT ENFRAL TGEKGFGY+GSIFHRVIPNFM+QGGD T +GTGGKSIYG++F DENF
Sbjct: 53 PKTAENFRALATGEKGFGYEGSIFHRVIPNFMIQGGDITKGDGTGGKSIYGSRFPDENFK 112
Query: 336 LKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 494
L H PG+LSMANAG D+NGSQFFITTVKT WLDG HVVFG V+ G ++VK+I
Sbjct: 113 LSHQRPGLLSMANAGPDSNGSQFFITTVKTPWLDGHHVVFGEVLSGYDIVKKI 165
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 175 bits (426), Expect = 4e-45
Identities = 85/140 (60%), Positives = 102/140 (72%), Gaps = 4/140 (2%)
Frame = +3
Query: 147 DVTPKTCENFRALCTGEKGFG----YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNK 314
+V PKT +NF +LC G + G YKGS FHRVI NFMLQGGDFT NGTGG+SIYG K
Sbjct: 26 NVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNFMLQGGDFTRGNGTGGESIYGEK 85
Query: 315 FEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 494
FEDENF LKH P +LSMANAG +TNGSQFFITTV T LDG+HVVFG V++G V+ I
Sbjct: 86 FEDENFELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGKVIQGKSTVRTI 145
Query: 495 ETFGSQSGKTSKRIVIKDCG 554
E +++ +VI++CG
Sbjct: 146 ENLETKNDDPVVPVVIEECG 165
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 165 bits (402), Expect = 3e-42
Identities = 79/147 (53%), Positives = 102/147 (69%), Gaps = 8/147 (5%)
Frame = +3
Query: 144 SDVTPKTCENFRALCTGE------KGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIY 305
S + PKT ENFR CTGE K GYK S FHR+I FM+QGGDF + +GTG +I+
Sbjct: 27 SSIVPKTAENFRQFCTGETLGVNQKPIGYKNSTFHRIIQGFMIQGGDFVSGDGTGSATIF 86
Query: 306 GNK-FEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEV 482
++ F DENFTLKH PG+LSMANAG D+NG QFFITTV +LDG+HVVFG V+EG ++
Sbjct: 87 NSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQFFITTVPCDFLDGKHVVFGEVIEGYDI 146
Query: 483 VKQIE-TFGSQSGKTSKRIVIKDCGQI 560
VK+IE T + + + I +CG++
Sbjct: 147 VKEIESTPVGANSRPKSNVAIVECGEM 173
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 141 bits (341), Expect = 8e-35
Identities = 69/125 (55%), Positives = 90/125 (72%), Gaps = 1/125 (0%)
Frame = +3
Query: 123 KLLLS*XSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSI 302
K+L+ ++ PKTC+NF L ++G+ Y G IFHRVIP+F++QGGD T G GG SI
Sbjct: 12 KILIELYTEHAPKTCQNFYTLA--KEGY-YDGVIFHRVIPDFVIQGGDPTG-TGRGGTSI 67
Query: 303 YGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGME 479
YG+KF+DE + L HTG G+LSMANAG +TN SQFFIT T WLDG+H +FG VV G+
Sbjct: 68 YGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRVVSGLS 127
Query: 480 VVKQI 494
V K++
Sbjct: 128 VCKRM 132
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 117 bits (281), Expect = 2e-27
Identities = 60/115 (52%), Positives = 77/115 (66%), Gaps = 1/115 (0%)
Frame = +3
Query: 156 PKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE-NF 332
PK +NF E G+ Y +IFHR+I NFM+QGGD +GTGG+SI+ FEDE +
Sbjct: 476 PKAVQNFTT--HAENGY-YDNTIFHRIIKNFMIQGGDPLG-DGTGGESIWKKDFEDEISP 531
Query: 333 TLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 497
LKH P +SMAN+G +TNGSQFFITT T WLDG+H +F G++VV +IE
Sbjct: 532 NLKHDRPFTVSMANSGPNTNGSQFFITTDLTPWLDGKHTIFARAYAGLDVVHRIE 586
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 101 bits (241), Expect = 1e-22
Identities = 56/130 (43%), Positives = 76/130 (58%), Gaps = 1/130 (0%)
Frame = +3
Query: 144 SDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFED 323
+D P NF L ++G+ Y+ +IFHR I FM+QGGD + G GG+SI+G F+D
Sbjct: 293 TDYAPHAVYNFVQLA--KQGY-YRNTIFHRNIARFMIQGGD-PSGTGRGGQSIWGKPFKD 348
Query: 324 ENFT-LKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIET 500
E LKH G++SMAN G +TNGSQFFI LD +H +FG VV G+ V+ +E
Sbjct: 349 EFCNPLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHTIFGRVVGGLNVLDALEK 408
Query: 501 FGSQSGKTSK 530
+ S K
Sbjct: 409 VPTNSNDHPK 418
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 82.6 bits (195), Expect = 4e-17
Identities = 47/105 (44%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
Frame = +3
Query: 156 PKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENF- 332
PK C NF LC +G+ Y G+I HRV+P F++QGGD T G GG+SIYG F E
Sbjct: 34 PKACRNFIQLCL--EGY-YDGTIVHRVVPEFLIQGGDPTG-TGMGGESIYGEPFAVETHP 89
Query: 333 TLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVV 467
L+ G++ MA + N SQFFIT T +G+ +FG VV
Sbjct: 90 RLRFIRRGLVGMACTENEGNNSQFFITLGPTPEWNGKQTLFGRVV 134
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 55.6 bits (128), Expect = 5e-09
Identities = 46/146 (31%), Positives = 69/146 (47%), Gaps = 16/146 (10%)
Frame = +3
Query: 156 PKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIY-----GNKFE 320
PKTCENF LC K Y F+ + N+ Q GD G GG+ ++ G +F
Sbjct: 22 PKTCENFLKLC---KLKYYNFCPFYNIQHNYTCQTGDPLGPTGDGGRCVWNVLNKGTRFF 78
Query: 321 DENF--TLKHTGPGVLSMANAGADTN-------GSQFFIT-TVKTSWLDGRHVVFGNVVE 470
F +L H G++SM+ A + GSQF IT + LD R+ ++G V E
Sbjct: 79 KAEFNPSLVHNKMGLVSMSTATISSRDDKLLVCGSQFIITLSDNLEGLDERYPIYGQVAE 138
Query: 471 GMEVVKQI-ETFGSQSGKTSKRIVIK 545
G + + +I + + G+ + I IK
Sbjct: 139 GFDTLLKINDAICDEEGQPYRDIRIK 164
>SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 31.9 bits (69), Expect = 0.076
Identities = 20/51 (39%), Positives = 30/51 (58%)
Frame = +1
Query: 211 TRAPFSIVSSPISCCKEGTSPTITALGESPSTAISLKTRISPLSTPDLASS 363
+RA S++S I KE +P+ITA SP +A S + ISP + P + +S
Sbjct: 321 SRAAASLLS--ILDSKEKNTPSITAKAGSPQSAPSKASYISPYARPGITTS 369
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 27.5 bits (58), Expect = 1.6
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 226 SIVSSPISCCKEGTSPTITALGESPSTAISLKTRISPLSTP 348
S S+P+S S T T+ +P ++++ T S STP
Sbjct: 318 SASSTPLSSVSSANSTTATSTSSTPLSSVNSTTATSASSTP 358
>SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 423
Score = 27.1 bits (57), Expect = 2.2
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -3
Query: 520 FPDWLPKVSICLTTSMPSTTFPKTTCLPS 434
FP WL K S CL +P T+ P T + S
Sbjct: 302 FP-WLKKNSFCLYLPIPLTSIPSTPSIRS 329
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 26.6 bits (56), Expect = 2.8
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 392 WFPVLHHHC 418
WFP +HHHC
Sbjct: 97 WFPEVHHHC 105
>SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 904
Score = 26.6 bits (56), Expect = 2.8
Identities = 13/53 (24%), Positives = 24/53 (45%)
Frame = -2
Query: 554 TTVFDNDSLRGLPRLAAKGLNLLDNFHAFNNIPKDNMSAIQPGGLDSGDEELG 396
T VFD + +L+ ++++DN +IPK+ A S + +G
Sbjct: 525 TVVFDKTGTLTVGKLSVTDISIVDNLEELLDIPKNIFWAFVKASESSSEHPIG 577
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 26.6 bits (56), Expect = 2.8
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +1
Query: 172 TSVPCALARKASVTRAPFSIVSSPISCCKEGTSPTITALGESPSTAISLKTRISPLST 345
TS C + S+ S +S+PI+ TS + T++ P++ S T SPL T
Sbjct: 225 TSTSCTTS--TSIPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT 280
Score = 26.2 bits (55), Expect = 3.8
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +1
Query: 172 TSVPCALARKASVTRAPFSIVSSPISCCKEGTSPTITALGESPSTAISLKTRISPLST 345
TS C + T S+ S+PI+ TS + T++ P++ S T SPL T
Sbjct: 168 TSTSCTTSTSIPPTGGSSSL-STPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT 224
Score = 25.0 bits (52), Expect = 8.7
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +1
Query: 172 TSVPCALARKASVTRAPFSIVSSPISCCKEGTSPTITALGESPSTAISLKTRISPLST 345
TS C + T S+ S+PI+ TS + T++ P++ S T +PL T
Sbjct: 111 TSTSCTTSTSIPPTGGSSSL-STPITPTVPPTSTSSTSIPIPPTSTSSTDTNSNPLPT 167
>SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr
1|||Manual
Length = 654
Score = 26.2 bits (55), Expect = 3.8
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = -3
Query: 487 LTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCL 338
LT +P TTF T +P + +V ++++ PL+ + P PV L
Sbjct: 37 LTEQLP-TTFRITASIPHATQVRDYFIEHYYPLIENARTEDAKIPLPVSL 85
>SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 583
Score = 25.8 bits (54), Expect = 5.0
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +3
Query: 264 DFTNHNGTGGKSIYGNKFEDEN-FTLKHTGPGVLSMANAGADTNGSQFFI 410
D + T KS+YG +D+N F + T V+ ADT Q F+
Sbjct: 11 DLEKYPSTATKSVYGQSKDDKNVFDIHPTESEVIPGEVEYADTPSHQNFL 60
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 25.8 bits (54), Expect = 5.0
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = -3
Query: 505 PKVSICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKF 326
P S + +S +++ T+ P+S EV T P+ S+ A + E + G V
Sbjct: 162 PASSTEVASSYSASSTEVTSSYPASSEVATSTSSYVAPVSSSVASSSEISAGSATSYVPT 221
Query: 325 SSSNL 311
SSS++
Sbjct: 222 SSSSI 226
>SPCC1450.07c |||D-amino acid oxidase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 348
Score = 25.4 bits (53), Expect = 6.6
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 56 IPAECLYHEYSSTSLLTMPH 115
+P EC+Y ++T L+ PH
Sbjct: 128 LPGECIYGHKATTFLINAPH 147
>SPBC1711.07 |||WD repeat protein Rrb1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 25.4 bits (53), Expect = 6.6
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -1
Query: 231 DGKWSPCNRSLSRQCTGHGSFHTSWE*RH--FXSSITIFPQWGIVNSDVEEYSW 76
D +WSP +++ C+ G+F W+ R+ S++T+ G+ DV SW
Sbjct: 296 DLQWSPSEKNVFSSCSCDGTFRI-WDVRNKQKTSALTVNAHPGV---DVNVLSW 345
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 25.0 bits (52), Expect = 8.7
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = +1
Query: 148 TSLPRRVKTSVPCALARKASVTRAPFSIVSSPISCCKEGTSPTITALGESPSTAISLKTR 327
TSL +S+P + + A+ T S+ SS + S + + L S +TAIS +
Sbjct: 12 TSLSSSASSSIPASSSSAAAST----SLSSSSVI-----PSSSSSMLSSSSATAISSSSS 62
Query: 328 ISPLSTPDLAS 360
SPLS+ S
Sbjct: 63 SSPLSSSSFTS 73
>SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 534
Score = 25.0 bits (52), Expect = 8.7
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
Frame = -2
Query: 476 HAFNNIPKDNMSAIQPGGLDSGDEELGTISISTGISHGEDARSGVLKG------EILVFK 315
H N P + P +S EL + IS+G+DA S VLK E++V +
Sbjct: 228 HELNESPSTPTAPDFPH-YNSSPSELSPTQRRSSISNGKDAPSPVLKDLTSYTQEVIVCR 286
Query: 314 LIAVDGLSPS 285
LSPS
Sbjct: 287 KFLHHSLSPS 296
>SPCC24B10.17 |emp24||COPII-coated vesicle component Emp24
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 199
Score = 25.0 bits (52), Expect = 8.7
Identities = 14/59 (23%), Positives = 25/59 (42%)
Frame = +3
Query: 216 GSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTN 392
G I H+ +PN M Q + G Y + + E+ + GV+ +++ D N
Sbjct: 67 GQIMHQEVPNSMAQYSFTVKNPGKYMYCFYNDALDGESKEVLFNVHGVIYISDEDLDAN 125
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting
protein 3 homolog Bud6|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1385
Score = 25.0 bits (52), Expect = 8.7
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -2
Query: 272 GEVPSLQHEIGDDTMENGALVTEAFLASAQGTEVFTRL 159
GEV ++QH +T+++ T S+ TE+ RL
Sbjct: 878 GEVSAIQHSSAQNTLDDHVNTTTHESPSSAFTEILERL 915
>SPAC30D11.01c ||SPAC56F8.01|alpha-glucosidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 993
Score = 25.0 bits (52), Expect = 8.7
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = -2
Query: 560 NLTTVFDNDSLRGLPRLAAKGLNLLDNFHA--FNNIPKDNMSAIQPGGLDSGDEELGTIS 387
N+ ++ L G + G NL F A +++ P+ NM P ++ +GT +
Sbjct: 210 NMVEDYNVYGLSGSQQSFRLGNNLTKTFWATGYSDSPEANMYGSHPFYMEQRYIPIGTTN 269
Query: 386 ISTGISHG 363
T SHG
Sbjct: 270 TYTSASHG 277
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,672,924
Number of Sequences: 5004
Number of extensions: 59434
Number of successful extensions: 210
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 196
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 269634532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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