Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0589
(615 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 241 2e-64
SB_31360| Best HMM Match : No HMM Matches (HMM E-Value=.) 234 5e-62
SB_24678| Best HMM Match : No HMM Matches (HMM E-Value=.) 185 2e-47
SB_24677| Best HMM Match : No HMM Matches (HMM E-Value=.) 168 4e-42
SB_51693| Best HMM Match : Pro_isomerase (HMM E-Value=3.5e-19) 98 6e-21
SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23) 91 5e-19
SB_24676| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 3e-18
SB_25950| Best HMM Match : Pro_isomerase (HMM E-Value=2.5e-24) 89 3e-18
SB_32917| Best HMM Match : Pro_isomerase (HMM E-Value=5.1e-23) 86 2e-17
SB_3070| Best HMM Match : Pro_isomerase (HMM E-Value=2.3e-05) 77 9e-15
SB_23239| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 5e-08
SB_21081| Best HMM Match : Pro_isomerase (HMM E-Value=0.11) 46 2e-05
SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_6440| Best HMM Match : DUF638 (HMM E-Value=6.2) 37 0.011
SB_42464| Best HMM Match : Pro_isomerase (HMM E-Value=3.9e-06) 33 0.14
SB_40118| Best HMM Match : DREPP (HMM E-Value=0.085) 33 0.24
SB_24760| Best HMM Match : PT (HMM E-Value=0.17) 31 0.56
SB_6387| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.56
SB_3760| Best HMM Match : SVA (HMM E-Value=0.19) 30 1.3
SB_24028| Best HMM Match : DNA_photolyase (HMM E-Value=1.3e-39) 30 1.7
SB_19447| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 29 3.0
SB_32934| Best HMM Match : K_tetra (HMM E-Value=7.79963e-42) 28 5.2
SB_26973| Best HMM Match : DUF471 (HMM E-Value=1.1) 28 5.2
SB_46599| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) 28 6.9
SB_43146| Best HMM Match : Ank (HMM E-Value=0) 28 6.9
SB_15696| Best HMM Match : DUF282 (HMM E-Value=2.5) 28 6.9
SB_55431| Best HMM Match : DnaJ_C (HMM E-Value=7.2e-13) 27 9.1
SB_31923| Best HMM Match : DnaJ (HMM E-Value=2.8e-38) 27 9.1
SB_54783| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_43283| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 241 bits (591), Expect = 2e-64
Identities = 105/147 (71%), Positives = 124/147 (84%)
Frame = +3
Query: 123 KLLLS*XSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSI 302
++++ SDV P T ENFR LCT EKGFGYKGS FHR+IP FM QGGDFT HNGTGGKSI
Sbjct: 152 RIVMELRSDVVPMTAENFRCLCTHEKGFGYKGSSFHRIIPQFMCQGGDFTKHNGTGGKSI 211
Query: 303 YGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEV 482
YG KFEDENF LKHTG GVLSMAN+G +TNGSQFF+TT KT WLDG+HVVFGNV+EG +V
Sbjct: 212 YGAKFEDENFVLKHTGAGVLSMANSGPNTNGSQFFLTTEKTDWLDGKHVVFGNVIEGFDV 271
Query: 483 VKQIETFGSQSGKTSKRIVIKDCGQIA 563
V+++E GSQSGK SK++VI DCG+++
Sbjct: 272 VRKMEAVGSQSGKASKKVVIDDCGELS 298
>SB_31360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 235
Score = 234 bits (572), Expect = 5e-62
Identities = 105/146 (71%), Positives = 120/146 (82%)
Frame = +3
Query: 123 KLLLS*XSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSI 302
++++ DV PKT ENFRALCTGEKGFGYKGS FHRVIP FM QGGDFT +GTGGKSI
Sbjct: 18 RIVMELRDDVVPKTAENFRALCTGEKGFGYKGSSFHRVIPGFMCQGGDFTRGDGTGGKSI 77
Query: 303 YGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEV 482
YG KF DENF LKHTGPG+LSMANAG TNGSQFF+ T KTSWLDG+HVVFG+V +GM+V
Sbjct: 78 YGAKFADENFNLKHTGPGILSMANAGPGTNGSQFFLCTAKTSWLDGKHVVFGSVKDGMDV 137
Query: 483 VKQIETFGSQSGKTSKRIVIKDCGQI 560
VK+IE GS SGKTSK++VI D +
Sbjct: 138 VKKIEKVGSDSGKTSKKVVIADSASV 163
>SB_24678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 201
Score = 185 bits (451), Expect = 2e-47
Identities = 84/125 (67%), Positives = 98/125 (78%)
Frame = +3
Query: 123 KLLLS*XSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSI 302
+++L D PKT NF AL E+GFGYK SIFHRVI NFM+QGGDFTN +GTGG SI
Sbjct: 41 RVILGLFGDTAPKTVANFVALADKEQGFGYKDSIFHRVIKNFMIQGGDFTNKDGTGGYSI 100
Query: 303 YGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEV 482
YG F+DENF LKH GPG L MANAG +TNGSQF+ITT+KTSWLDG H FG V+EGM+V
Sbjct: 101 YGKYFDDENFNLKHYGPGWLCMANAGKNTNGSQFYITTIKTSWLDGSHTCFGKVLEGMDV 160
Query: 483 VKQIE 497
V++IE
Sbjct: 161 VRRIE 165
>SB_24677| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 168 bits (408), Expect = 4e-42
Identities = 78/101 (77%), Positives = 85/101 (84%), Gaps = 2/101 (1%)
Frame = +3
Query: 186 CT--GEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGV 359
CT +KGFGYK SIFHRVI +FM+QGGDFT +GTGGKSIYG KF DENF L+H G G
Sbjct: 79 CTIESQKGFGYKNSIFHRVIQDFMIQGGDFTKGDGTGGKSIYGQKFADENFKLQHYGAGW 138
Query: 360 LSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEV 482
LSMANAG DTNGSQFFITTVKT WLDGRHVVFG V++GMEV
Sbjct: 139 LSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLKGMEV 179
>SB_51693| Best HMM Match : Pro_isomerase (HMM E-Value=3.5e-19)
Length = 99
Score = 97.9 bits (233), Expect = 6e-21
Identities = 45/73 (61%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
Frame = +3
Query: 279 NGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVF 455
+GTGG+SI+G +FEDE + L+H P +SMANAG +TNGSQFFIT V T WLD +H VF
Sbjct: 2 DGTGGESIWGGEFEDEFHRNLRHDRPYTVSMANAGPNTNGSQFFITVVPTPWLDNKHTVF 61
Query: 456 GNVVEGMEVVKQI 494
G VV+GM+V +QI
Sbjct: 62 GRVVKGMDVAQQI 74
>SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23)
Length = 741
Score = 91.5 bits (217), Expect = 5e-19
Identities = 40/75 (53%), Positives = 55/75 (73%)
Frame = +3
Query: 339 KHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSG 518
+H PG+LSMAN+G +TNGSQFFITTV T LDGRHVVFG V++GM+VV+++E
Sbjct: 188 EHDKPGLLSMANSGPNTNGSQFFITTVPTPHLDGRHVVFGKVLKGMDVVRELEATPVDDS 247
Query: 519 KTSKRIVIKDCGQIA 563
+I++CG++A
Sbjct: 248 SPKSPCIIEECGELA 262
>SB_24676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 89.0 bits (211), Expect = 3e-18
Identities = 40/65 (61%), Positives = 49/65 (75%)
Frame = +3
Query: 366 MANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIK 545
MANAG DTNGSQFFITTVKTSWLDG+HVVFG V+EGM+VV+++E + K +I
Sbjct: 1 MANAGKDTNGSQFFITTVKTSWLDGKHVVFGKVLEGMDVVRKLENVNVKGSTPVKTCMID 60
Query: 546 DCGQI 560
D G +
Sbjct: 61 DSGTL 65
>SB_25950| Best HMM Match : Pro_isomerase (HMM E-Value=2.5e-24)
Length = 145
Score = 88.6 bits (210), Expect = 3e-18
Identities = 39/91 (42%), Positives = 57/91 (62%)
Frame = +3
Query: 282 GTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGN 461
G GG+S+YG FEDE+F++ H GV+ MAN G TNGSQF+IT W+D ++V FG
Sbjct: 46 GIGGESVYGPLFEDEDFSVAHNRRGVVGMANKGRHTNGSQFYITLQPAPWMDTKYVAFGQ 105
Query: 462 VVEGMEVVKQIETFGSQSGKTSKRIVIKDCG 554
V+EG+ V+ +E + + + + DCG
Sbjct: 106 VIEGLNVLDVLEGQETFNERPKVECRVADCG 136
>SB_32917| Best HMM Match : Pro_isomerase (HMM E-Value=5.1e-23)
Length = 378
Score = 86.2 bits (204), Expect = 2e-17
Identities = 44/95 (46%), Positives = 62/95 (65%), Gaps = 1/95 (1%)
Frame = +3
Query: 279 NGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 458
NGTGG+SIYG F DE F KH P +LSMAN G +TNGSQFFI HVVFG
Sbjct: 25 NGTGGESIYGGTFGDECFEFKHERPMLLSMANRGPNTNGSQFFII----------HVVFG 74
Query: 459 NVVEGMEVVKQIETF-GSQSGKTSKRIVIKDCGQI 560
+V++G E+V+QIE+ ++ + + + + +CG++
Sbjct: 75 HVIQGEELVRQIESLPTNEKNRPNADVKVSNCGEL 109
>SB_3070| Best HMM Match : Pro_isomerase (HMM E-Value=2.3e-05)
Length = 49
Score = 77.4 bits (182), Expect = 9e-15
Identities = 33/46 (71%), Positives = 41/46 (89%)
Frame = +3
Query: 357 VLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 494
+LSMANAG TNGSQFF+ T KTSWLDG+HVVFG+V +GM+VVK++
Sbjct: 2 ILSMANAGPGTNGSQFFLCTAKTSWLDGKHVVFGSVKDGMDVVKKM 47
>SB_23239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 54.8 bits (126), Expect = 5e-08
Identities = 44/123 (35%), Positives = 62/123 (50%), Gaps = 6/123 (4%)
Frame = +3
Query: 144 SDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFED 323
+D P + NF A + G+ Y G+ FHRVIP FM+QGG F + + ++
Sbjct: 41 ADKAPISTANFLAYV--DSGY-YAGTQFHRVIPGFMVQGGGF---DADMQQKDTQAPIKN 94
Query: 324 ENFTLKHTGPGVLSMANAGA-DTNGSQFFITTVKTSWLDG-----RHVVFGNVVEGMEVV 485
E H G L+MA D+ SQFFI ++LD + VFG VV+GM+VV
Sbjct: 95 EADNGLHNVRGTLAMARTQVRDSATSQFFINHKDNAFLDHGSRDFGYAVFGKVVKGMDVV 154
Query: 486 KQI 494
+I
Sbjct: 155 DKI 157
>SB_21081| Best HMM Match : Pro_isomerase (HMM E-Value=0.11)
Length = 48
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/45 (53%), Positives = 27/45 (60%), Gaps = 8/45 (17%)
Frame = +3
Query: 123 KLLLS*XSDVTPKTCENFRALCTGEKGFG--------YKGSIFHR 233
++L +D PKT ENFRALCTGEKG G YKG FHR
Sbjct: 3 RVLFELFADKVPKTAENFRALCTGEKGIGPSTGKPLHYKGCPFHR 47
>SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1651
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +3
Query: 342 HTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 458
H G +SMAN G ++NGSQFFI K LD ++ +FG
Sbjct: 301 HNARGTVSMANNGPNSNGSQFFICYGKQPHLDMKYTMFG 339
>SB_6440| Best HMM Match : DUF638 (HMM E-Value=6.2)
Length = 175
Score = 37.1 bits (82), Expect = 0.011
Identities = 14/40 (35%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Frame = +3
Query: 444 HVVFGNVVEGMEVVKQIETF-GSQSGKTSKRIVIKDCGQI 560
HVVFG+V++G E+V+QIE+ ++ + + + + +CG++
Sbjct: 3 HVVFGHVIQGEELVRQIESLPTNEKNRPNADVKVSNCGEL 42
>SB_42464| Best HMM Match : Pro_isomerase (HMM E-Value=3.9e-06)
Length = 454
Score = 33.5 bits (73), Expect = 0.14
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = +3
Query: 153 TPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGN 311
TPK C NF LC +G+ Y +IFHR++ +GG+ N G G + GN
Sbjct: 24 TPKACRNFIQLCL--EGY-YDNTIFHRIV-----KGGE--NIYGQSGFKVTGN 66
>SB_40118| Best HMM Match : DREPP (HMM E-Value=0.085)
Length = 512
Score = 32.7 bits (71), Expect = 0.24
Identities = 26/69 (37%), Positives = 35/69 (50%)
Frame = -2
Query: 554 TTVFDNDSLRGLPRLAAKGLNLLDNFHAFNNIPKDNMSAIQPGGLDSGDEELGTISISTG 375
T V +N + PR A +GL D F+ K+ MS I+PGG D +EE T S G
Sbjct: 431 TKVPENVQPKPKPRRAGEGLPHSDFKSGFSY--KEYMSGIRPGGPDMEEEEKATPQ-SNG 487
Query: 374 ISHGEDARS 348
+ E A+S
Sbjct: 488 DASDEKAQS 496
>SB_24760| Best HMM Match : PT (HMM E-Value=0.17)
Length = 422
Score = 31.5 bits (68), Expect = 0.56
Identities = 18/46 (39%), Positives = 20/46 (43%)
Frame = -3
Query: 484 TTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGP 347
TT PST P T PS+ E +T WEP P PGP
Sbjct: 34 TTGEPSTWEPMTGA-PSTWEPMTGAPSTWEPWTDGPGPYPTDGPGP 78
Score = 31.1 bits (67), Expect = 0.74
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -3
Query: 457 PKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGP 347
P TT PS+ E +T WEP+ AP+ T GP
Sbjct: 32 PFTTGEPSTWEPMTGAPSTWEPMTGAPSTWEPWTDGP 68
>SB_6387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 31.5 bits (68), Expect = 0.56
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = -3
Query: 487 LTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGP 347
L+ + + FP TT P + + T + EPL+ P +R P P
Sbjct: 13 LSATQLTAAFPTTTTTPVTTQTTTTDVSRTEPLIELPTAQEKRKPCP 59
>SB_3760| Best HMM Match : SVA (HMM E-Value=0.19)
Length = 259
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 5/43 (11%)
Frame = -3
Query: 460 FPKTTCLPSSQE-----VLTVVMKNWEPLVSAPALAMERTPGP 347
FP+ + LP S E +LT++++N P ++APA + P P
Sbjct: 81 FPQPSLLPPSSESFDITLLTILLRNICPTLTAPATGWDALPAP 123
>SB_24028| Best HMM Match : DNA_photolyase (HMM E-Value=1.3e-39)
Length = 432
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/56 (21%), Positives = 29/56 (51%)
Frame = +1
Query: 160 RRVKTSVPCALARKASVTRAPFSIVSSPISCCKEGTSPTITALGESPSTAISLKTR 327
+ + T+V C L ++ +S+ +SC + S T++ ++ ST +S +++
Sbjct: 369 KALSTTVSCQLKALSTTVSCELKALSTTVSCQSKALSTTVSCQSKALSTTVSCQSK 424
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/56 (21%), Positives = 29/56 (51%)
Frame = +1
Query: 160 RRVKTSVPCALARKASVTRAPFSIVSSPISCCKEGTSPTITALGESPSTAISLKTR 327
+ + T+V C L ++ +S+ +SC + S T++ ++ ST +S +++
Sbjct: 358 KALSTTVSCELKALSTTVSCQLKALSTTVSCELKALSTTVSCQSKALSTTVSCQSK 413
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/52 (23%), Positives = 26/52 (50%)
Frame = +1
Query: 160 RRVKTSVPCALARKASVTRAPFSIVSSPISCCKEGTSPTITALGESPSTAIS 315
+ + T+V C L ++ +S+ +SC + S T++ ++ ST +S
Sbjct: 380 KALSTTVSCELKALSTTVSCQSKALSTTVSCQSKALSTTVSCQSKALSTTVS 431
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/61 (21%), Positives = 31/61 (50%)
Frame = +1
Query: 145 VTSLPRRVKTSVPCALARKASVTRAPFSIVSSPISCCKEGTSPTITALGESPSTAISLKT 324
V+ + + T+V C L ++ +S+ +SC + S T++ ++ ST +S ++
Sbjct: 342 VSCQSKALSTTVSCELKALSTTVSCELKALSTTVSCQLKALSTTVSCELKALSTTVSCQS 401
Query: 325 R 327
+
Sbjct: 402 K 402
>SB_19447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1110
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Frame = -3
Query: 460 FPKTTCLPSSQE-----VLTVVMKNWEPLVSAPALAMERTPGP 347
FP+ LP S E +LT++++N P ++APA + P P
Sbjct: 81 FPQPPLLPPSSESFDITLLTILLRNICPTLTAPATGWDALPAP 123
>SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = -3
Query: 505 PKVSICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKF 326
P+ TTS PST+ P+T ++ T N AP+ + RT + LR
Sbjct: 87 PRTGSTTTTSAPSTSTPRTGSTTTTSAPSTSTTSN--STTRAPSTSTPRTGSTITLRTST 144
Query: 325 SS 320
+S
Sbjct: 145 TS 146
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 29.1 bits (62), Expect = 3.0
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +1
Query: 136 AXEVTSLPRRV---KTSVPCALARKASVTRAPFSIVSSPISCCKEGTSPTITALGESPST 306
A E T+ P+ +T+V + T AP + S + E T T +G PST
Sbjct: 3047 APETTAAPKTTVAPETTVAPETTDAPATTMAPETKAVSETTMAPEATVVPKTTVG--PST 3104
Query: 307 AISLKTRISPLSTPD 351
IS KT S TP+
Sbjct: 3105 TISPKTETSITETPE 3119
>SB_32934| Best HMM Match : K_tetra (HMM E-Value=7.79963e-42)
Length = 1207
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -1
Query: 114 WGIVNSDVEEYSW*RHSAGISNVSNLQNHHNDNASSL 4
WGI + D+E+ W + I+ L++ H D+A +
Sbjct: 103 WGINDRDMEQCCWAHYKRQINTEETLKSFHLDSARKM 139
>SB_26973| Best HMM Match : DUF471 (HMM E-Value=1.1)
Length = 674
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 196 RKASVTRAPFSIVSSPISCCKEGTSPTITALGESP 300
+K R S V SC +EG SPT T+ G++P
Sbjct: 276 KKPFSNREAHSCVELCRSCVREGCSPTPTSRGDAP 310
>SB_46599| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4482
Score = 27.9 bits (59), Expect = 6.9
Identities = 19/56 (33%), Positives = 26/56 (46%)
Frame = +1
Query: 226 SIVSSPISCCKEGTSPTITALGESPSTAISLKTRISPLSTPDLASSPWLMPVLILM 393
SIVS+ IS C T P+ T S+ + K I L D ++ P LIL+
Sbjct: 1087 SIVSNRISFCFNFTGPSFTVDTACSSSLTAFKLAIDNLQNGDCEAAIVCAPNLILI 1142
>SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)
Length = 2123
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/57 (28%), Positives = 23/57 (40%)
Frame = -3
Query: 517 PDWLPKVSICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGP 347
P P + TT+ P TT P+TT P + T + P + P +T P
Sbjct: 1767 PPHSPPTTTTTTTTTPETTAPRTT-TPETTTPETTTPRTTTPETTKPRTTTPKTTTP 1822
>SB_43146| Best HMM Match : Ank (HMM E-Value=0)
Length = 282
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -3
Query: 235 TRWKMEPL*PKPFSPVHRARKFSHVLGVTSLXQLNNN 125
TR+ +EP K F+P+H A ++ HV V L Q N
Sbjct: 3 TRYPIEPA--KGFTPLHEAARYGHVHIVKLLLQHYEN 37
>SB_15696| Best HMM Match : DUF282 (HMM E-Value=2.5)
Length = 128
Score = 27.9 bits (59), Expect = 6.9
Identities = 20/44 (45%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +1
Query: 181 PCALARKASVTRAPFSIVSSPISCCKE-GTSPTITA-LGESPST 306
PCALA SV+ P S VSS + G S TI+A SP T
Sbjct: 48 PCALATAPSVSEVPASTVSSSSPLRRSPGPSGTISASTSGSPRT 91
>SB_55431| Best HMM Match : DnaJ_C (HMM E-Value=7.2e-13)
Length = 278
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 171 NFRALCTGEKGFGYKGSIF 227
NF + TG+KGFG++G F
Sbjct: 67 NFSSYSTGQKGFGFEGMDF 85
>SB_31923| Best HMM Match : DnaJ (HMM E-Value=2.8e-38)
Length = 161
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 171 NFRALCTGEKGFGYKGSIF 227
NF + TG+KGFG++G F
Sbjct: 132 NFSSYSTGQKGFGFEGMDF 150
>SB_54783| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +1
Query: 202 ASVTRA-PFSIVSSPISCCKEGTSPTITALGESPSTAISLKTRISPLSTP 348
AS T A PF++ S C ++P T + S L T +PL+TP
Sbjct: 38 ASATLATPFALTRSNDPCLATASAPLATPFALTRSNDPHLATASAPLATP 87
>SB_43283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 278
Score = 27.5 bits (58), Expect = 9.1
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +1
Query: 166 VKTSVPCALARKASVTRAPF---SIVSSPISCCKEGTSPTITALGESPSTAISLKTRISP 336
V TS+ A S+ AP S+ S+P+ ++P T L S +L T SP
Sbjct: 157 VTTSLASAPVVTTSLASAPVETTSLASTPVETTSLASTPVDTTLTASSPVDTTL-TASSP 215
Query: 337 LSTPDLASSP 366
+ T AS P
Sbjct: 216 VETTPTASPP 225
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = -3
Query: 508 LPKVSICL-TTSMPSTTFPKTTCLPSSQEVLTV-VMKNWEPLVSAPALAMERTPGP 347
+P+ ++ L TT+ P TT P T + S + +V M + S +A E T P
Sbjct: 1626 VPETTLALETTTAPETTLPPETTMASESTLASVTTMAPESTVASVTTMAPESTLAP 1681
>SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2323
Score = 27.5 bits (58), Expect = 9.1
Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Frame = +3
Query: 261 GDFTNHNGTGGKSIYGNK-FEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLD 437
G T GTGG S N + T PGV AN G S + ++ TSW +
Sbjct: 313 GAGTGGPGTGGPSGSSNPPTTGTPASASPTAPGVKGGANGGDCFRDSCYIFSSEGTSWTE 372
Query: 438 GR 443
R
Sbjct: 373 NR 374
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,497,290
Number of Sequences: 59808
Number of extensions: 480320
Number of successful extensions: 1606
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1601
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1512078125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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