Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0589
(615 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase / c... 232 2e-61
At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase / c... 229 1e-60
At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase, cy... 228 3e-60
At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase, pu... 220 7e-58
At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase cyc... 219 9e-58
At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / c... 219 9e-58
At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase / c... 216 1e-56
At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, pu... 215 2e-56
At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase, ch... 207 5e-54
At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase, pu... 202 1e-52
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 188 3e-48
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 188 3e-48
At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase / c... 181 3e-46
At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase, pu... 166 9e-42
At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase, pu... 165 2e-41
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 140 9e-34
At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase, pu... 132 2e-31
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 129 2e-30
At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase cyc... 117 5e-27
At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyc... 117 7e-27
At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase, pu... 112 2e-25
At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyc... 99 2e-21
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 84 6e-17
At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase cyc... 51 5e-07
At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase cyc... 41 7e-04
At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase cyc... 41 7e-04
At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase cyc... 41 7e-04
At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase cyc... 39 0.002
At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase cyc... 33 0.11
At4g14805.1 68417.m02276 protease inhibitor/seed storage/lipid t... 31 0.46
At4g27520.1 68417.m03952 plastocyanin-like domain-containing pro... 31 0.80
At5g05660.1 68418.m00622 zinc finger (NF-X1 type) family protein... 30 1.4
At3g23150.1 68416.m02918 ethylene receptor, putative (ETR2) simi... 30 1.4
At3g15095.1 68416.m01909 expressed protein 29 2.4
At5g15760.1 68418.m01843 plastid-specific 30S ribosomal protein ... 29 3.2
At3g09000.1 68416.m01053 proline-rich family protein 28 4.3
At1g23090.1 68414.m02887 sulfate transporter, putative similar t... 28 4.3
At5g07270.1 68418.m00829 ankyrin repeat family protein contains ... 28 5.7
At3g05640.2 68416.m00628 protein phosphatase 2C, putative / PP2C... 27 7.5
At3g05640.1 68416.m00627 protein phosphatase 2C, putative / PP2C... 27 7.5
At2g16030.1 68415.m01838 expressed protein 27 7.5
At1g78955.1 68414.m09205 beta-amyrin synthase, putative similar ... 27 7.5
At1g03590.1 68414.m00339 protein phosphatase 2C family protein /... 27 7.5
At5g61030.1 68418.m07659 RNA-binding protein, putative similar t... 27 9.9
At5g15870.1 68418.m01857 glycosyl hydrolase family 81 protein si... 27 9.9
At4g10840.2 68417.m01764 kinesin light chain-related low similar... 27 9.9
At4g10840.1 68417.m01765 kinesin light chain-related low similar... 27 9.9
At3g51360.1 68416.m05624 aspartyl protease family protein contai... 27 9.9
At3g04140.1 68416.m00438 ankyrin repeat family protein contains ... 27 9.9
>At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP2) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443757|gb|AAB71402; similar
to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34790
Length = 174
Score = 232 bits (567), Expect = 2e-61
Identities = 109/154 (70%), Positives = 124/154 (80%), Gaps = 7/154 (4%)
Frame = +3
Query: 123 KLLLS*XSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVIPNFMLQGGDFTNHN 281
K+++ +D TPKT ENFRALCTGEKG G +KGS FHRVIPNFM QGGDFT N
Sbjct: 20 KIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVIPNFMCQGGDFTKGN 79
Query: 282 GTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGN 461
GTGG+SIYG KFEDENF KHTGPG+LSMANAGA+TNGSQFFI TVKT WLDG+HVVFG
Sbjct: 80 GTGGESIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQ 139
Query: 462 VVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQIA 563
VVEG++VVK IE GS SGK +K +VI DCG+I+
Sbjct: 140 VVEGLDVVKAIEKIGSSSGKPTKPVVIADCGEIS 173
>At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase /
cyclophilin / rotamase / cyclosporin A-binding protein
(ROC1) identical to SP|P34790 Peptidyl-prolyl cis-trans
isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin)
(Cyclosporin A-binding protein) {Arabidopsis thaliana}
Length = 172
Score = 229 bits (560), Expect = 1e-60
Identities = 106/154 (68%), Positives = 125/154 (81%), Gaps = 7/154 (4%)
Frame = +3
Query: 123 KLLLS*XSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVIPNFMLQGGDFTNHN 281
++++ +D TP+T ENFRALCTGEKG G +KGS FHRVIPNFM QGGDFT N
Sbjct: 19 RIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKFHRVIPNFMCQGGDFTAGN 78
Query: 282 GTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGN 461
GTGG+SIYG+KFEDENF KHTGPG+LSMANAGA+TNGSQFFI TVKT WLDG+HVVFG
Sbjct: 79 GTGGESIYGSKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQ 138
Query: 462 VVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQIA 563
VVEG++VVK IE GS SGK +K +V+ DCGQ++
Sbjct: 139 VVEGLDVVKAIEKVGSSSGKPTKPVVVADCGQLS 172
>At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase,
cytosolic / cyclophilin / rotamase (ROC3) identical to
cytosolic cyclophilin [Arabidopsis thaliana] GI:1305455
Length = 173
Score = 228 bits (557), Expect = 3e-60
Identities = 106/154 (68%), Positives = 124/154 (80%), Gaps = 7/154 (4%)
Frame = +3
Query: 123 KLLLS*XSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVIPNFMLQGGDFTNHN 281
++++ +D TP+T ENFRALCTGE+G G YKGS FHRVIP FM QGGDFT N
Sbjct: 20 RIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRVIPKFMCQGGDFTAGN 79
Query: 282 GTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGN 461
GTGG+SIYG+KF+DENF KHTGPG+LSMANAGA+TNGSQFFI T KTSWLDG+HVVFG
Sbjct: 80 GTGGESIYGSKFKDENFIKKHTGPGILSMANAGANTNGSQFFICTEKTSWLDGKHVVFGQ 139
Query: 462 VVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQIA 563
VVEG+ VV+ IE GS SG+TSK +VI DCGQI+
Sbjct: 140 VVEGLNVVRDIEKVGSDSGRTSKPVVIADCGQIS 173
>At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Catharanthus roseus] SWISS-PROT:Q39613
Length = 176
Score = 220 bits (537), Expect = 7e-58
Identities = 100/153 (65%), Positives = 120/153 (78%), Gaps = 7/153 (4%)
Frame = +3
Query: 123 KLLLS*XSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVIPNFMLQGGDFTNHN 281
++++ +DVTP+T NFRALCTGE G G YKGS FHR+IP FM QGGDFT N
Sbjct: 19 RVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAFHRIIPGFMCQGGDFTRGN 78
Query: 282 GTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGN 461
GTGG+SIYG+KFEDENF LKHTGPG+LSMAN+G +TNGSQFFI T KTSWLDG+HVVFG
Sbjct: 79 GTGGESIYGSKFEDENFKLKHTGPGILSMANSGPNTNGSQFFICTEKTSWLDGKHVVFGK 138
Query: 462 VVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQI 560
VV+G VVK +E GS G S+R+VI+DCG++
Sbjct: 139 VVDGYNVVKAMEDVGSDMGNPSERVVIEDCGEL 171
>At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 259
Score = 219 bits (536), Expect = 9e-58
Identities = 100/147 (68%), Positives = 117/147 (79%), Gaps = 1/147 (0%)
Frame = +3
Query: 123 KLLLS*XSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSI 302
++++ D P+T ENFRALCTGEKGFGYKGS FHRVI +FM+QGGDF NGTGGKS+
Sbjct: 108 RIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVIRDFMIQGGDFEKGNGTGGKSV 167
Query: 303 YGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEV 482
YG F+DENF L H GPGVLSMANAG +TNGSQFFI T+KTSWLDGRHVVFG V+EGMEV
Sbjct: 168 YGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTIKTSWLDGRHVVFGQVIEGMEV 227
Query: 483 VKQIETFGSQSG-KTSKRIVIKDCGQI 560
VK IE + G + K++VI DCGQ+
Sbjct: 228 VKLIEEQETDRGDRPRKKVVIADCGQL 254
>At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP1) / rotamase identical to cyclophilin
(CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl
cis-trans isomerase, PPIase (cyclophilin, cyclosporin
A-binding protein) [Catharanthus roseus]
SWISS-PROT:Q39613
Length = 172
Score = 219 bits (536), Expect = 9e-58
Identities = 103/147 (70%), Positives = 117/147 (79%), Gaps = 7/147 (4%)
Frame = +3
Query: 144 SDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSI 302
+D TP T ENFRALCTGEKG G +KGSIFHRVIP FM QGGDFT NGTGG+SI
Sbjct: 26 ADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIFHRVIPGFMCQGGDFTAKNGTGGESI 85
Query: 303 YGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEV 482
YG KF+DENF KHTG G+LSMAN+G +TNGSQFFI T KTSWLDG+HVVFG VV+G++V
Sbjct: 86 YGAKFKDENFIKKHTGAGILSMANSGPNTNGSQFFICTDKTSWLDGKHVVFGQVVKGLDV 145
Query: 483 VKQIETFGSQSGKTSKRIVIKDCGQIA 563
VK IE GS SGKTSK + I DCGQ++
Sbjct: 146 VKAIEKVGSDSGKTSKVVTITDCGQLS 172
>At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP5) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443755|gb|AAB71401
Length = 201
Score = 216 bits (527), Expect = 1e-56
Identities = 101/142 (71%), Positives = 114/142 (80%), Gaps = 7/142 (4%)
Frame = +3
Query: 156 PKTCENFRALCTGEKGFG-------YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNK 314
PKT ENFRALCTGEKG G YKGS FHR+IP+FM+QGGDFT+ NG GG+SIYG K
Sbjct: 58 PKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQK 117
Query: 315 FEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 494
F DENF LKHTGPGVLSMAN+G DTNGSQFFITTV TSWLDGRHVVFG VV+GM+VV +I
Sbjct: 118 FADENFKLKHTGPGVLSMANSGEDTNGSQFFITTVTTSWLDGRHVVFGKVVQGMDVVYKI 177
Query: 495 ETFGSQSGKTSKRIVIKDCGQI 560
E G QSG ++VI D G++
Sbjct: 178 EAEGKQSGTPKSKVVIADSGEL 199
>At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
(ROC7) similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 204
Score = 215 bits (525), Expect = 2e-56
Identities = 101/153 (66%), Positives = 117/153 (76%), Gaps = 7/153 (4%)
Frame = +3
Query: 123 KLLLS*XSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVIPNFMLQGGDFTNHN 281
++++ PKT ENFRALCTGEKG G YKGS FHR+IP+FMLQGGDFT+ N
Sbjct: 50 RIVMGLFGKTVPKTVENFRALCTGEKGIGKNGKALHYKGSSFHRIIPSFMLQGGDFTHGN 109
Query: 282 GTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGN 461
G GG+SIYG KF DENF LKHTGPG LSMANAG DTNGSQFFITTV TSWLDGRHVVFG
Sbjct: 110 GMGGESIYGEKFADENFKLKHTGPGFLSMANAGQDTNGSQFFITTVTTSWLDGRHVVFGK 169
Query: 462 VVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQI 560
VV GM+VV ++E G+QSG ++VI D G++
Sbjct: 170 VVTGMDVVYKVEAEGNQSGTPKSKVVIVDSGEL 202
>At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase,
chloroplast / cyclophilin / rotamase / cyclosporin
A-binding protein (ROC4) identical to peptidyl-prolyl
cis-trans isomerase, chloroplast precursor, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34791; identical to
cDNA nuclear-encoded chloroplast stromal cyclophilin
(ROC4) GI:405130
Length = 260
Score = 207 bits (505), Expect = 5e-54
Identities = 94/147 (63%), Positives = 118/147 (80%), Gaps = 1/147 (0%)
Frame = +3
Query: 123 KLLLS*XSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSI 302
++++ +V PKT ENFRALCTGEK +GYKGS FHR+I +FM+QGGDFT NGTGG SI
Sbjct: 110 RIVMGLFGEVVPKTVENFRALCTGEKKYGYKGSSFHRIIKDFMIQGGDFTEGNGTGGISI 169
Query: 303 YGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEV 482
YG KFEDENFTLKHTGPG+LSMANAG +TNGSQFFI TVKTSWLD +HVVFG V+EGM++
Sbjct: 170 YGAKFEDENFTLKHTGPGILSMANAGPNTNGSQFFICTVKTSWLDNKHVVFGQVIEGMKL 229
Query: 483 VKQIETFGSQSGKTSKR-IVIKDCGQI 560
V+ +E+ +++ K+ I CG++
Sbjct: 230 VRTLESQETRAFDVPKKGCRIYACGEL 256
>At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 228
Score = 202 bits (494), Expect = 1e-52
Identities = 93/154 (60%), Positives = 115/154 (74%), Gaps = 7/154 (4%)
Frame = +3
Query: 123 KLLLS*XSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVIPNFMLQGGDFTNHN 281
++L+ ++ PKT ENFR+LCTGEKG G +KGS FHR+IP FM+QGGDFT +
Sbjct: 74 RILIGLFGNIVPKTAENFRSLCTGEKGVGNMGKPLYFKGSSFHRIIPGFMIQGGDFTRGD 133
Query: 282 GTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGN 461
G GG+SIYG+KF DENF LKHTGPG LSMAN+G D+NGSQFFITTV TSWLDG HVVFG
Sbjct: 134 GRGGESIYGDKFADENFKLKHTGPGFLSMANSGPDSNGSQFFITTVTTSWLDGHHVVFGK 193
Query: 462 VVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQIA 563
V+ GMEVV++IE G SG ++I G+++
Sbjct: 194 VLSGMEVVRKIEAQGQDSGVPKANVIIFASGEVS 227
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 188 bits (458), Expect = 3e-48
Identities = 90/154 (58%), Positives = 109/154 (70%), Gaps = 8/154 (5%)
Frame = +3
Query: 120 EKLLLS*XSDVTPKTCENFRALCTGEKGFG--------YKGSIFHRVIPNFMLQGGDFTN 275
+++++ +DV PKT ENFRALCTGE G G +KGS FHRVI FM QGGDF+N
Sbjct: 21 QRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGSSFHRVIKGFMAQGGDFSN 80
Query: 276 HNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVF 455
NGTGG+SIYG KF DENF L H G GVLSMAN G +TNGSQFFI + LDG+HVVF
Sbjct: 81 GNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGPNTNGSQFFILFKRQPHLDGKHVVF 140
Query: 456 GNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQ 557
G VVEGM V+K++E G+ GK + + I DCG+
Sbjct: 141 GKVVEGMAVIKKMELVGTSDGKPTSPVKIIDCGE 174
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 188 bits (458), Expect = 3e-48
Identities = 90/154 (58%), Positives = 109/154 (70%), Gaps = 8/154 (5%)
Frame = +3
Query: 120 EKLLLS*XSDVTPKTCENFRALCTGEKGFG--------YKGSIFHRVIPNFMLQGGDFTN 275
+++++ +DV PKT ENFRALCTGE G G +KGS FHRVI FM QGGDF+N
Sbjct: 21 QRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGSSFHRVIKGFMAQGGDFSN 80
Query: 276 HNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVF 455
NGTGG+SIYG KF DENF L H G GVLSMAN G +TNGSQFFI + LDG+HVVF
Sbjct: 81 GNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGPNTNGSQFFILFKRQPHLDGKHVVF 140
Query: 456 GNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQ 557
G VVEGM V+K++E G+ GK + + I DCG+
Sbjct: 141 GKVVEGMAVIKKMELVGTSDGKPTSPVKIIDCGE 174
>At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase /
cyclophilin-40 (CYP40) / rotamase identical to
cyclophilin-40 [Arabidopsis thaliana] GI:13442983;
supporting cDNA gi|13442982|gb|AY026065.1|
Length = 361
Score = 181 bits (441), Expect = 3e-46
Identities = 89/155 (57%), Positives = 111/155 (71%), Gaps = 9/155 (5%)
Frame = +3
Query: 123 KLLLS*XSDVTPKTCENFRALCTGEKGFG--------YKGSIFHRVIPNFMLQGGDFTNH 278
++++ DV PKT ENFR LCTGEKG G YKG+ FHRVI FM+QGGD + +
Sbjct: 19 RIVIELYDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNRFHRVIKGFMIQGGDISAN 78
Query: 279 NGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 458
+GTGG+SIYG KF+DENF LKH G+LSMAN+G +TNGSQFFITT +TS LDG+HVVFG
Sbjct: 79 DGTGGESIYGLKFDDENFELKHERKGMLSMANSGPNTNGSQFFITTTRTSHLDGKHVVFG 138
Query: 459 NVVEGMEVVKQIETFG-SQSGKTSKRIVIKDCGQI 560
V +GM VV+ IE + S+ +VI DCG+I
Sbjct: 139 RVTKGMGVVRSIEHVSIEEQSCPSQDVVIHDCGEI 173
>At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Homo sapiens]
gi|3647230|gb|AAC60793
Length = 199
Score = 166 bits (404), Expect = 9e-42
Identities = 79/146 (54%), Positives = 103/146 (70%), Gaps = 7/146 (4%)
Frame = +3
Query: 144 SDVTPKTCENFRALCTGE-----KGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYG 308
+D+ PKT ENFR CTGE K GYK FHRVI +FM+Q GDF ++G+G SIYG
Sbjct: 54 ADIAPKTAENFRQFCTGELRKAGKPLGYKECQFHRVIKDFMVQSGDFLKNDGSGCMSIYG 113
Query: 309 NKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVV-EGMEVV 485
+KFEDENFT KHTGPG+LSMAN+G +TNG QFFIT K WLD +HVVFG V+ +G+ V+
Sbjct: 114 HKFEDENFTAKHTGPGLLSMANSGPNTNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVM 173
Query: 486 KQIETFG-SQSGKTSKRIVIKDCGQI 560
++IE + + +VI +CG++
Sbjct: 174 RKIENVAIGPNNRPKLAVVITECGEM 199
>At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 224
Score = 165 bits (401), Expect = 2e-41
Identities = 80/154 (51%), Positives = 105/154 (68%), Gaps = 8/154 (5%)
Frame = +3
Query: 123 KLLLS*XSDVTPKTCENFRALCTGEKG-------FGYKGSIFHRVIPNFMLQGGDFTNHN 281
++++ V PKT ENFRALCTGEKG YKG+ FHR+I F++QGGD + +
Sbjct: 62 RIVIGLYGTVVPKTVENFRALCTGEKGKTSSGKPLHYKGTPFHRIISGFVIQGGDIIHGD 121
Query: 282 GTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGN 461
G SIYG F DENF ++H+ G+++MAN G D+NGSQFFITTVK SWL+G HVV G
Sbjct: 122 GKSSDSIYGGTFPDENFKIQHSHAGMVAMANTGPDSNGSQFFITTVKASWLEGEHVVLGK 181
Query: 462 VVEGMEVVKQIE-TFGSQSGKTSKRIVIKDCGQI 560
V++GM+ V IE G+ SGK K++VI D G+I
Sbjct: 182 VIQGMDNVFAIEGGAGTYSGKPRKKVVIADSGEI 215
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 140 bits (338), Expect = 9e-34
Identities = 71/154 (46%), Positives = 92/154 (59%), Gaps = 8/154 (5%)
Frame = +3
Query: 120 EKLLLS*XSDVTPKTCENFRALCTGEKGFG--------YKGSIFHRVIPNFMLQGGDFTN 275
E ++ +V PKT ENFRALCTGEKG G YKGS FHR++ Q GDF N
Sbjct: 21 ETMVFELFPEVAPKTSENFRALCTGEKGIGPRSGKPLHYKGSFFHRIMKGSSAQAGDFVN 80
Query: 276 HNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVF 455
NGT G+SIY KF DE+ L+H G+LSM+ A D GS F IT LD +VVF
Sbjct: 81 RNGTAGESIYAGKFPDESPKLRHEETGLLSMSIADRDKFGSHFHITFRPNQQLDRNNVVF 140
Query: 456 GNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQ 557
G +++G E++K+IE G + GK + + I CG+
Sbjct: 141 GKLIQGKEILKKIERVGDEEGKPTVSVKIIRCGE 174
>At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
contains Pfam domain, PF00160: peptidyl-prolyl cis-trans
isomerase, cyclophilin-type
Length = 164
Score = 132 bits (318), Expect = 2e-31
Identities = 64/115 (55%), Positives = 83/115 (72%), Gaps = 1/115 (0%)
Frame = +3
Query: 153 TPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE-N 329
+P+TC NF L +G+ Y +FHR++ +F++QGGD T G GG+SIYG+KFEDE N
Sbjct: 30 SPRTCRNFLEL--SRRGY-YDNVLFHRIVKDFIVQGGDPTG-TGRGGESIYGSKFEDEIN 85
Query: 330 FTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 494
LKHTG G+LSMANAG +TNGSQFFIT LDG+H +FG V GMEV+K++
Sbjct: 86 KELKHTGAGILSMANAGPNTNGSQFFITLAPQPSLDGKHTIFGRVCRGMEVIKRL 140
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 129 bits (311), Expect = 2e-30
Identities = 67/115 (58%), Positives = 82/115 (71%), Gaps = 1/115 (0%)
Frame = +3
Query: 156 PKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE-NF 332
PKT ENF C G+ Y +FHRVI FM+Q GD +GTGG+SI+G +FEDE +
Sbjct: 497 PKTVENFTTHC--RNGY-YDNHLFHRVIRGFMIQTGDPLG-DGTGGQSIWGREFEDEFHK 552
Query: 333 TLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 497
+L+H P LSMANAG +TNGSQFFITTV T WLD +H VFG VV+GM+VV+ IE
Sbjct: 553 SLRHDRPFTLSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVVKGMDVVQGIE 607
>At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 160
Score = 117 bits (282), Expect = 5e-27
Identities = 62/118 (52%), Positives = 77/118 (65%), Gaps = 1/118 (0%)
Frame = +3
Query: 147 DVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE 326
D PK+ ENF ALC G+ Y G+IFHR I FM+QGGD G GG SI+G KF DE
Sbjct: 19 DEVPKSAENFLALCAS--GY-YDGTIFHRNIKGFMIQGGD-PKGTGKGGTSIWGKKFNDE 74
Query: 327 -NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 497
+LKH G+LSMAN+G +TNGSQFFIT K L+G + +FG V+ G EV+ +E
Sbjct: 75 IRDSLKHNARGMLSMANSGPNTNGSQFFITYAKQPHLNGLYTIFGKVIHGFEVLDIME 132
>At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 595
Score = 117 bits (281), Expect = 7e-27
Identities = 60/118 (50%), Positives = 78/118 (66%), Gaps = 1/118 (0%)
Frame = +3
Query: 147 DVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE 326
D+ P+ CENF LC E+G+ Y G FHR I NFM+QGGD T G GG+SI+G F+DE
Sbjct: 362 DIAPRACENFITLC--ERGY-YNGVAFHRSIRNFMIQGGDPTG-TGKGGESIWGKPFKDE 417
Query: 327 -NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 497
N L H+G GV+SMAN+G TNGSQFF+ + L+ +H VFG VV G+ + +E
Sbjct: 418 PNSKLLHSGRGVVSMANSGPHTNGSQFFVLYKSATHLNYKHTVFGGVVGGLATLAAME 475
>At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase PPIase
(cyclophilin, cyclosporin A-binding protein) [Tomato]
SWISS-PROT:P21568
Length = 232
Score = 112 bits (270), Expect = 2e-25
Identities = 65/162 (40%), Positives = 97/162 (59%), Gaps = 11/162 (6%)
Frame = +3
Query: 123 KLLLS*XSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVIPNFMLQGGDFTNHN 281
++++ +D+TP+T ENFR LCTGE+G G YKGS F ++P+ M GGD N
Sbjct: 19 RIVIELFADLTPRTAENFRGLCTGERGIGKCGKPIHYKGSTFDHIVPDLMWCGGDIIFEN 78
Query: 282 GTGGKSIYGNKFEDENFTLKH-TGPGVLSMANAGADTNGSQFFITTVKTS-WLDGRHVVF 455
+ I+ + +DE F L H GPG++SM AD+NGSQF I +DG HVV
Sbjct: 79 ----EPIHSEELDDEYFILNHEDGPGIISM----ADSNGSQFQIHMKDYGLQVDGDHVVI 130
Query: 456 GNVVEGMEVVKQI--ETFGSQSGKTSKRIVIKDCGQIA*FKS 575
G VVEG+++++ I E + + SK +VI DCG+++ ++S
Sbjct: 131 GKVVEGLDLMRNIEKEVITTTTRTPSKPVVIADCGELSDYRS 172
>At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 504
Score = 99.1 bits (236), Expect = 2e-21
Identities = 52/105 (49%), Positives = 71/105 (67%), Gaps = 2/105 (1%)
Frame = +3
Query: 156 PKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE-NF 332
PK+ NF LC +G+ + +IFHRVIP F++QGGD T +GTGG SIYG F DE +
Sbjct: 34 PKSVRNFVQLCL--EGY-FDNTIFHRVIPGFLVQGGDPTG-SGTGGDSIYGGVFADEFHS 89
Query: 333 TLKHTGPGVLSMANAGA-DTNGSQFFITTVKTSWLDGRHVVFGNV 464
L+ + G+++MANA + ++NGSQFF T K WLD +H +FG V
Sbjct: 90 RLRFSHRGIVAMANASSPNSNGSQFFFTLDKCDWLDKKHTIFGKV 134
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 84.2 bits (199), Expect = 6e-17
Identities = 56/144 (38%), Positives = 77/144 (53%), Gaps = 10/144 (6%)
Frame = +3
Query: 144 SDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIY----GN 311
SD P TC+NF LC K Y G +FH V +F Q GD T G GG SIY G
Sbjct: 18 SDKCPLTCKNFLKLC---KIKYYNGCLFHTVQKDFTAQTGDPTG-TGAGGDSIYKFLYGE 73
Query: 312 K---FEDE-NFTLKHTGPGVLSMANAGADTNGSQFFIT-TVKTSWLDGRHVVFGNVVEGM 476
+ ++DE + LKH+ G ++MA+ G + N SQF+ T +LDG+H VFG + EG
Sbjct: 74 QARFYKDEIHLDLKHSKTGTVAMASGGENLNASQFYFTLRDDLDYLDGKHTVFGQIAEGF 133
Query: 477 EVVKQI-ETFGSQSGKTSKRIVIK 545
+ + +I E + + K I IK
Sbjct: 134 DTLTRINEAYVDPKNRPYKNIRIK 157
>At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 230
Score = 51.2 bits (117), Expect = 5e-07
Identities = 32/117 (27%), Positives = 58/117 (49%)
Frame = +3
Query: 147 DVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE 326
D P + F C + G+ +KG +F RV+ +F++Q GD + ++ +
Sbjct: 96 DTAPNVVDQFMKFC--QDGY-FKGFLFSRVVKHFVIQAGDSAEFDAVKDWALDRKNIDT- 151
Query: 327 NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 497
+LKH ++ A + G +FFI + + L+ + VFG V +G +VV++IE
Sbjct: 152 --SLKHE-EFMVGTPKAKNEQGGFEFFIVSAQIKDLNEKLTVFGRVSKGQDVVQEIE 205
>At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 40.7 bits (91), Expect = 7e-04
Identities = 31/115 (26%), Positives = 54/115 (46%)
Frame = +3
Query: 153 TPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENF 332
+P+ + F LC + +KG F RVI N+++Q G + + G +
Sbjct: 101 SPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAGHSPSSIPVEEWTAKGKLRGRLHI 157
Query: 333 TLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 497
KH + + N G + + ITT L+ + +VFG V++G +VV++IE
Sbjct: 158 GPKHEAFMLGTPKNKG-NNKDFELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
>At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 40.7 bits (91), Expect = 7e-04
Identities = 31/115 (26%), Positives = 54/115 (46%)
Frame = +3
Query: 153 TPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENF 332
+P+ + F LC + +KG F RVI N+++Q G + + G +
Sbjct: 101 SPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAGHSPSSIPVEEWTAKGKLRGRLHI 157
Query: 333 TLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 497
KH + + N G + + ITT L+ + +VFG V++G +VV++IE
Sbjct: 158 GPKHEAFMLGTPKNKG-NNKDFELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
>At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 40.7 bits (91), Expect = 7e-04
Identities = 31/115 (26%), Positives = 54/115 (46%)
Frame = +3
Query: 153 TPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENF 332
+P+ + F LC + +KG F RVI N+++Q G + + G +
Sbjct: 101 SPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAGHSPSSIPVEEWTAKGKLRGRLHI 157
Query: 333 TLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 497
KH + + N G + + ITT L+ + +VFG V++G +VV++IE
Sbjct: 158 GPKHEAFMLGTPKNKG-NNKDFELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
>At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 290
Score = 39.1 bits (87), Expect = 0.002
Identities = 44/168 (26%), Positives = 70/168 (41%), Gaps = 20/168 (11%)
Frame = +3
Query: 57 YRQNVSTTSILRRHC*RCPTXEKLLLS*XSDVTPKTCENFRALCTGEKGFGYKGSIFHRV 236
+R + S T C +++L P T F+ +CT YK + H++
Sbjct: 65 FRSDPSATLSSTTPCSDSTPLGRVVLGLYGRHVPITVSTFKRMCTSSST-SYKNTPVHKI 123
Query: 237 IPN--FML--QGGDF--TNHNGTGGKSIYGNK--FEDENFTLKHTGPGVLSMANAGADTN 392
P F+ QGG T G + + N + F L H GV+S+ + D +
Sbjct: 124 FPGQYFLAGRQGGGRRDTAEVGYSLRDLPRNTDVVNSKAFLLPHARAGVVSLCLSENDDD 183
Query: 393 GS----------QFFITTVK--TSWLDGRHVVFGNVVEGMEVVKQIET 500
+F ITT + LDG ++VFG V+EG++VV I +
Sbjct: 184 DDIRLDPDYRNVEFLITTGPGPSPQLDGGNIVFGTVLEGLDVVTSISS 231
>At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 317
Score = 33.5 bits (73), Expect = 0.11
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +3
Query: 390 NGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTS 527
NG++F IT V + L+ +V G V+EGM VV+++ + TS
Sbjct: 230 NGTEFVITAVDSPELEDSVLVIGKVLEGMGVVEKMREVKTVRDNTS 275
>At4g14805.1 68417.m02276 protease inhibitor/seed storage/lipid
transfer protein (LTP)-related weak hit to Pfam PF00234:
Protease inhibitor/seed storage/LTP family
Length = 219
Score = 31.5 bits (68), Expect = 0.46
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = -3
Query: 496 SICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKFSSS 317
++ T PS++ P TC ++E+ V+ P VS+P M TP P+C V F+SS
Sbjct: 22 AVTATQQAPSSSPPVLTC---TEEL--VMFSPCLPYVSSPPNNMSETPDPICCSV-FTSS 75
>At4g27520.1 68417.m03952 plastocyanin-like domain-containing
protein similar to PIR|JC7196 phytocyanin-related
protein Pn14 {Ipomoea nil}; contains Pfam profile
PF02298: Plastocyanin-like domain
Length = 349
Score = 30.7 bits (66), Expect = 0.80
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +1
Query: 172 TSVPCALARKASVTRAPFS--IVSSPISCCKEGTSPTITALGESPSTAISLKTRISPLST 345
TS P +A K+S T P S + S P S + +SP + SPS A T SP +
Sbjct: 235 TSPPAPMAPKSSSTIPPSSAPMTSPPGSMAPKSSSPVSNSPTVSPSLAPGGSTSSSPSDS 294
Query: 346 P 348
P
Sbjct: 295 P 295
>At5g05660.1 68418.m00622 zinc finger (NF-X1 type) family protein
contains PF01422: NF-X1 type zinc finger
Length = 912
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/40 (32%), Positives = 17/40 (42%)
Frame = +3
Query: 9 KTHCHCGGFVNCLHC*YRQNVSTTSILRRHC*RCPTXEKL 128
K CHCG V+ C Y +S ++ R P KL
Sbjct: 667 KRSCHCGAMVHAFECIYYNTMSEKDQMKARSCRGPCHRKL 706
>At3g23150.1 68416.m02918 ethylene receptor, putative (ETR2) similar
to putative ethylene receptor; ETR2 [Arabidopsis
thaliana] gi|3687654|gb|AAC62208.
Length = 773
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 464 NIPKDNMSAIQPGGLDSGDEELGTISISTGISHGEDARSGVLK 336
N+ D+ S+ + S D+E+G + S G G+D GV K
Sbjct: 543 NVENDDSSSQSFASVSSRDQEVGDVRFSGGYGLGQDLSFGVCK 585
>At3g15095.1 68416.m01909 expressed protein
Length = 684
Score = 29.1 bits (62), Expect = 2.4
Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Frame = +1
Query: 160 RRVKTSVPC-ALARKASVTRAPFSIVSSPISCCKEGTSPTITALGESPSTAISLKTRISP 336
+R+ T+V A +R+ S+ R P + SC P ITA ++ ++ P
Sbjct: 579 KRIVTAVDSNASSRRRSIDRPPLHLQPPRSSCSYPAAPPIITAAAAVGEQRVAGANKVQP 638
Query: 337 LSTPDLASSP 366
P S P
Sbjct: 639 PVLPRCKSEP 648
>At5g15760.1 68418.m01843 plastid-specific 30S ribosomal protein 3,
putative / PSRP-3, putative similar to SP|P82412
Plastid-specific 30S ribosomal protein 3, chloroplast
precursor (PSRP-3) {Spinacia oleracea}; contains Pfam
profile PF04839: Plastid and cyanobacterial ribosomal
protein (PSRP-3 / Ycf65)
Length = 183
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 286 LGESPSTAISLKTRISPLSTPDLASSPW 369
L P ISL T++ P S P L+ S W
Sbjct: 22 LSSKPIAHISLSTKLKPSSRPSLSCSTW 49
>At3g09000.1 68416.m01053 proline-rich family protein
Length = 541
Score = 28.3 bits (60), Expect = 4.3
Identities = 29/87 (33%), Positives = 37/87 (42%), Gaps = 6/87 (6%)
Frame = +1
Query: 136 AXEVTSLPRRVKTSVPCALARKASVTRAPF-----SIVSSPISCCKEGTSPTITALGESP 300
A S PR S ++R A+ TR P SIVSS SPT+ +L ++P
Sbjct: 220 ATPTRSNPRPSSASSKKPVSRPATPTRRPSTPTGPSIVSSKAPSRGTSPSPTVNSLSKAP 279
Query: 301 STAISLKTRISPLSTPDLASS-PWLMP 378
S S +P L SS PW P
Sbjct: 280 SRGTS--------PSPTLNSSRPWKPP 298
>At1g23090.1 68414.m02887 sulfate transporter, putative similar to
sulfate transporter [Arabidopsis thaliana] GI:2285885;
contains Pfam profiles PF00916: Sulfate transporter
family, PF01740: STAS domain
Length = 631
Score = 28.3 bits (60), Expect = 4.3
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Frame = +3
Query: 264 DFTNHNG-TGGKSIYGNKFEDENFTLKHTGPGVLSM---ANAGADTNGSQFFITTVKTSW 431
+F N N T S + + E+E KH+ L + A +G DTNG FF KT+
Sbjct: 517 NFANSNYLTERTSRWIEECEEEEAQEKHSSLQFLILEMSAVSGVDTNGVSFFKELKKTTA 576
Query: 432 LDGRHVVFGNVVEGMEVVKQIETFGSQ 512
+VF N + EVV++++ Q
Sbjct: 577 KKDIELVFVNPLS--EVVEKLQRADEQ 601
>At5g07270.1 68418.m00829 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 513
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 208 VTRAPFSIVSSPISCCKEGTSPTITALG 291
VT +PF V+ P+ C EGT P G
Sbjct: 429 VTCSPFPSVNIPMCTCNEGTCPNFETHG 456
>At3g05640.2 68416.m00628 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase-2C GB:AAC36699
from [Mesembryanthemum crystallinum]
Length = 358
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -3
Query: 412 VMKNWEPLVSAPALAMERTPGPVCLR 335
V + W+P+ +P LAM R G C++
Sbjct: 242 VHRVWQPVDESPGLAMSRAFGDYCIK 267
>At3g05640.1 68416.m00627 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase-2C GB:AAC36699
from [Mesembryanthemum crystallinum]
Length = 358
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -3
Query: 412 VMKNWEPLVSAPALAMERTPGPVCLR 335
V + W+P+ +P LAM R G C++
Sbjct: 242 VHRVWQPVDESPGLAMSRAFGDYCIK 267
>At2g16030.1 68415.m01838 expressed protein
Length = 231
Score = 27.5 bits (58), Expect = 7.5
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -3
Query: 547 SLITILLEVFPDWLPKVSICLTT-SMPSTTFPKTTCLPSSQEVLTVVMKN 401
S+ T+L+ + PK I S P T FP++TC S ++ L + KN
Sbjct: 18 SIGTVLMVIMILQTPKTCISPEAPSKPHTHFPRSTCDSSPRQHLPLPKKN 67
>At1g78955.1 68414.m09205 beta-amyrin synthase, putative similar to
beta-Amyrin Synthase GI:3688600 from [Panax ginseng] and
GI:8918271 from [Pisum sativum]
Length = 769
Score = 27.5 bits (58), Expect = 7.5
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = -3
Query: 457 PKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKFSSSNLLP*MDFP 290
PK +PS E +V +W + A ER P P+ K ++ L DFP
Sbjct: 666 PKKRYIPSEGERSNLVQTSWAMMGLLHAGQAERDPSPLHRAAKLLINSQLENGDFP 721
>At1g03590.1 68414.m00339 protein phosphatase 2C family protein /
PP2C family protein similar to protein phosphatase-2C;
PP2C (GI:3643088) [Mesembryanthemum crystallinum];
contains Pfam PF00481 : Protein phosphatase 2C domain;
Length = 447
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 412 VMKNWEPLVSAPALAMERTPGPVCLR 335
V + W P +AP LAM R G CL+
Sbjct: 240 VSRVWLPFDNAPGLAMARAFGDFCLK 265
>At5g61030.1 68418.m07659 RNA-binding protein, putative similar to
RNA-binding protein from [Solanum tuberosum]
GI:15822705, [Nicotiana tabacum] GI:15822703, [Nicotiana
sylvestris] GI:624925; contains InterPro entry
IPR000504: RNA-binding region RNP-1 (RNA recognition
motif) (RRM)
Length = 309
Score = 27.1 bits (57), Expect = 9.9
Identities = 18/47 (38%), Positives = 19/47 (40%)
Frame = +3
Query: 258 GGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGS 398
GGD T H G GG F T G G + A A D NGS
Sbjct: 188 GGDATGHGGAGGGYGSSGGFGSSGNTY---GEGSSASAGAVGDYNGS 231
>At5g15870.1 68418.m01857 glycosyl hydrolase family 81 protein
similar to beta-glucan-elicitor receptor GI:1752734 from
[Glycine max]
Length = 745
Score = 27.1 bits (57), Expect = 9.9
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -3
Query: 292 PPVPLWLVKSPPCSMKLGMTRWKMEP-L*PKPFSPV--HRARKFSHVL 158
PP+PL SPP S ++ +R K P L P+ S V +R FSH L
Sbjct: 29 PPLPLPPSPSPPPSQQMSSSRQKNTPFLFPRSDSSVLPDPSRFFSHDL 76
>At4g10840.2 68417.m01764 kinesin light chain-related low similarity
to kinesin light chain [Plectonema boryanum] GI:2645229;
contains Pfam profile PF00515 TPR Domain
Length = 531
Score = 27.1 bits (57), Expect = 9.9
Identities = 20/65 (30%), Positives = 28/65 (43%)
Frame = -3
Query: 478 SMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKFSSSNLLP*M 299
+MP KT PS L V + + +PL + P M++TP R K S +
Sbjct: 3 AMPGLVSVKT---PSDTPPLRVAVPDTQPLSNPPRTPMKKTPSSTPSRSKPSPNRSTGKK 59
Query: 298 DFPPV 284
D P V
Sbjct: 60 DSPTV 64
>At4g10840.1 68417.m01765 kinesin light chain-related low similarity
to kinesin light chain [Plectonema boryanum] GI:2645229;
contains Pfam profile PF00515 TPR Domain
Length = 609
Score = 27.1 bits (57), Expect = 9.9
Identities = 20/65 (30%), Positives = 28/65 (43%)
Frame = -3
Query: 478 SMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKFSSSNLLP*M 299
+MP KT PS L V + + +PL + P M++TP R K S +
Sbjct: 3 AMPGLVSVKT---PSDTPPLRVAVPDTQPLSNPPRTPMKKTPSSTPSRSKPSPNRSTGKK 59
Query: 298 DFPPV 284
D P V
Sbjct: 60 DSPTV 64
>At3g51360.1 68416.m05624 aspartyl protease family protein contains
Eukaryotic and viral aspartyl proteases active site,
PROSITE:PS00141
Length = 488
Score = 27.1 bits (57), Expect = 9.9
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = -2
Query: 437 IQPGGLDSGDEELGTISISTGISHGEDARS--GVLKGEILVFKLIAVDGLSPSAVMVGEV 264
+ PG +G I +ST DAR G + ++ +FK +AV+G+ A+ V
Sbjct: 178 LSPGSKSTGVLVEDVIHMSTEEGEARDARITFGCSESQLGLFKEVAVNGIMGLAIADIAV 237
Query: 263 PSLQHEIG 240
P++ + G
Sbjct: 238 PNMLVKAG 245
>At3g04140.1 68416.m00438 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 656
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 214 RAPFSIVSSPISCCKEGTSPTITALGESPSTAISLK 321
R P + SP SC + P T G+ PS ++ LK
Sbjct: 520 RVPLREMYSPSSCSRGKAFPMRTESGDLPSLSVRLK 555
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,396,500
Number of Sequences: 28952
Number of extensions: 337877
Number of successful extensions: 1059
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1022
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1236350304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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