Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0587
         (564 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0I0I0 Cluster: Peptidase M6, immune inhibitor A precur...    38   0.16 
UniRef50_Q83AN2 Cluster: Putative uncharacterized protein; n=5; ...    35   1.5  
UniRef50_A5FGI6 Cluster: Putative uncharacterized protein; n=1; ...    34   2.0  
UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: L...    33   3.5  
UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-...    33   4.6  
UniRef50_UPI00015B4E06 Cluster: PREDICTED: similar to CG8144-PK;...    33   6.1  

>UniRef50_Q0I0I0 Cluster: Peptidase M6, immune inhibitor A
           precursor; n=18; Shewanella|Rep: Peptidase M6, immune
           inhibitor A precursor - Shewanella sp. (strain MR-7)
          Length = 936

 Score = 37.9 bits (84), Expect = 0.16
 Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = +3

Query: 90  GPPDGEW--LHRRPWTSAIPGTEPSGCQPYVSS 182
           G P G W  +    WT AIPGT+PSG  PY  S
Sbjct: 346 GSPVGAWSLMSSGSWTGAIPGTKPSGFSPYARS 378


>UniRef50_Q83AN2 Cluster: Putative uncharacterized protein; n=5;
           Coxiella burnetii|Rep: Putative uncharacterized protein
           - Coxiella burnetii
          Length = 541

 Score = 34.7 bits (76), Expect = 1.5
 Identities = 18/58 (31%), Positives = 35/58 (60%)
 Frame = -2

Query: 527 GESTIY*YIE*K*RTNKMIIIKNV*FFNLIYVFYLLLLKNVFYYYMTHMLLHLSMKIH 354
           G +T + Y +   RTN+  ++ +     L Y+FYLL   ++FY Y+ H+  HL+++++
Sbjct: 299 GTATFFIYKKTMDRTNQRRLLLSQALLLLAYIFYLL---SLFYIYLYHIQPHLALQLN 353


>UniRef50_A5FGI6 Cluster: Putative uncharacterized protein; n=1;
           Flavobacterium johnsoniae UW101|Rep: Putative
           uncharacterized protein - Flavobacterium johnsoniae
           UW101
          Length = 107

 Score = 34.3 bits (75), Expect = 2.0
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = -2

Query: 452 FFNLIYVFYLLLLKNVFYYYMTHMLLHLSMKIHQNTLKGQVSGAALTS 309
           F NL +VFYL LL   F +Y  + +L++++   QN        A +TS
Sbjct: 32  FLNLSHVFYLRLLNVFFIFYGVNRILNINLAQGQNNFLFNAVSAMITS 79


>UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: Like
           moricin - Manduca sexta (Tobacco hawkmoth) (Tobacco
           hornworm)
          Length = 248

 Score = 33.5 bits (73), Expect = 3.5
 Identities = 14/19 (73%), Positives = 14/19 (73%)
 Frame = -3

Query: 112 NHSPSGGPYARLPTRTLKK 56
           NHSPSG PYA LPTR   K
Sbjct: 5   NHSPSGRPYASLPTRAKMK 23


>UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-like
            protein; n=25; Arthropoda|Rep: Endonuclease and reverse
            transcriptase-like protein - Bombyx mori (Silk moth)
          Length = 986

 Score = 33.1 bits (72), Expect = 4.6
 Identities = 17/34 (50%), Positives = 20/34 (58%)
 Frame = -3

Query: 217  KLDTSIQSYVLRELTYGWQPLGSVPGIADVHGRR 116
            + D S     L  +  G Q LGS PGIA+VHGRR
Sbjct: 953  RYDMSFFKRGLWRVLSGRQRLGSAPGIAEVHGRR 986


>UniRef50_UPI00015B4E06 Cluster: PREDICTED: similar to CG8144-PK;
           n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
           CG8144-PK - Nasonia vitripennis
          Length = 442

 Score = 32.7 bits (71), Expect = 6.1
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = -3

Query: 136 ADVHGRRCNHSPSGGPYARLPTRT 65
           ADV G   N++P+G PYA+ PT T
Sbjct: 224 ADVSGPVANYNPTGSPYAQAPTTT 247


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 501,655,532
Number of Sequences: 1657284
Number of extensions: 9198473
Number of successful extensions: 23212
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 22448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23200
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37904934977
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)