Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0584
         (579 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.5  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    22   4.3  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   5.7  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   7.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
 Frame = +2

Query: 320 TIHTNLVSVSPYCIFNN---ICIYVFFFSFLI 406
           T+H  L+   P+ IF     +C Y F+++F+I
Sbjct: 80  TVH--LLFYCPFIIFTVHFLLCTYYFYYAFII 109



 Score = 22.6 bits (46), Expect = 2.5
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +2

Query: 353 YCIFNNICIYVFFFSFLI 406
           Y     +C+Y F+++F+I
Sbjct: 105 YAFIILLCVYYFYYAFII 122



 Score = 22.6 bits (46), Expect = 2.5
 Identities = 7/19 (36%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
 Frame = +2

Query: 353 YCIFNNI-CIYVFFFSFLI 406
           YC+   + CIY F+++F++
Sbjct: 229 YCVLIILLCIYYFYYAFIL 247



 Score = 21.4 bits (43), Expect = 5.7
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 359 IFNNICIYVFFFSFLI 406
           +F  +CIY F+ +F+I
Sbjct: 140 LFFLLCIYYFYCAFII 155



 Score = 21.0 bits (42), Expect = 7.6
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 371 ICIYVFFFSFLI 406
           +CIY FF +F+I
Sbjct: 164 LCIYHFFCAFII 175


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 232 YSTLASISSCNNN 270
           Y+ ++SIS C NN
Sbjct: 33  YNNISSISECKNN 45


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = -1

Query: 429 PFLIPFEEIRNEKKKTYIQILLK 361
           P  +PF+   N+K+K  I++ ++
Sbjct: 333 PRRVPFDLFENKKRKNNIKLYVR 355


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 531 NTLNILYLRFSIRLIIFNNTAT 466
           +TLN+++L    R  + NN  T
Sbjct: 103 STLNLIFLLIQTRFEMINNIIT 124


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,737
Number of Sequences: 336
Number of extensions: 2012
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14412858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)