Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0584
(579 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70268-6|CAA94221.2| 1243|Caenorhabditis elegans Hypothetical pr... 31 0.59
Z70265-4|CAA94203.2| 1243|Caenorhabditis elegans Hypothetical pr... 31 0.59
X59156-6|CAA41878.1| 160|Caenorhabditis elegans transposase pro... 30 1.0
U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z74042-14|CAE11313.1| 311|Caenorhabditis elegans Hypothetical p... 30 1.4
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 29 2.4
Z83120-9|CAB05589.2| 773|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z81515-11|CAB04199.2| 773|Caenorhabditis elegans Hypothetical p... 28 4.2
AF011893-1|AAC27124.1| 773|Caenorhabditis elegans maternal-effe... 28 4.2
U23528-2|AAK31387.1| 984|Caenorhabditis elegans Calsyntenin/alc... 27 7.3
AY091591-1|AAM00045.1| 984|Caenorhabditis elegans calsyntenin p... 27 7.3
Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical pr... 27 9.6
AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-l... 27 9.6
AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-l... 27 9.6
>Z70268-6|CAA94221.2| 1243|Caenorhabditis elegans Hypothetical
protein T21E8.3 protein.
Length = 1243
Score = 31.1 bits (67), Expect = 0.59
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 62 LYCNFFFFKHLCSVLSTKLRFRVYR 136
LYC FFFF + LST+LR + ++
Sbjct: 738 LYCQFFFFGKVSEKLSTRLRIKSFQ 762
>Z70265-4|CAA94203.2| 1243|Caenorhabditis elegans Hypothetical
protein T21E8.3 protein.
Length = 1243
Score = 31.1 bits (67), Expect = 0.59
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 62 LYCNFFFFKHLCSVLSTKLRFRVYR 136
LYC FFFF + LST+LR + ++
Sbjct: 738 LYCQFFFFGKVSEKLSTRLRIKSFQ 762
>X59156-6|CAA41878.1| 160|Caenorhabditis elegans transposase
protein.
Length = 160
Score = 30.3 bits (65), Expect = 1.0
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 317 NTIHTNLVSVSPYCIFNNICIYVFFFSFL 403
N +++SV +C F+ +C + FFSF+
Sbjct: 122 NESDNSIISVDNFCFFSVVCFSLIFFSFM 150
>U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical protein
F48E3.3 protein.
Length = 1493
Score = 30.3 bits (65), Expect = 1.0
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 247 SISSCNNNLKRKALCDESRSIIGKYHTYKSRIR 345
+I CNN L ++ D + IIG++ TY IR
Sbjct: 1435 TIDLCNNPLTKEPKLDSAARIIGEWKTYDDEIR 1467
>Z74042-14|CAE11313.1| 311|Caenorhabditis elegans Hypothetical
protein T11F9.18 protein.
Length = 311
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 290 AMRVVQLLENTIHTNLVSVSPYCIFNNICIYVFFFSFLI 406
+ R + L N +H+ + + + IF +I + +FF SF+I
Sbjct: 228 SQRTISLQRNFLHSLYIQTAVHVIFISIPLGIFFLSFII 266
>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -2
Query: 176 VYSNTTSGIRVLLYGIHGNGVLLTKRNISV*KKKSYNI 63
+ S TT+ VL + I+ NG +L ++I K K YN+
Sbjct: 3236 IVSETTTDTPVLPFAINSNGDVLISQSIDYEKIKKYNL 3273
>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -2
Query: 176 VYSNTTSGIRVLLYGIHGNGVLLTKRNISV*KKKSYNI 63
+ S TT+ VL + I+ NG +L ++I K K YN+
Sbjct: 3236 IVSETTTDTPVLPFAINSNGDVLISQSIDYEKIKKYNL 3273
>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -2
Query: 176 VYSNTTSGIRVLLYGIHGNGVLLTKRNISV*KKKSYNI 63
+ S TT+ VL + I+ NG +L ++I K K YN+
Sbjct: 3236 IVSETTTDTPVLPFAINSNGDVLISQSIDYEKIKKYNL 3273
>Z83120-9|CAB05589.2| 773|Caenorhabditis elegans Hypothetical
protein R06A4.7 protein.
Length = 773
Score = 28.3 bits (60), Expect = 4.2
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 57 GGYIVTFFFLNTYVPFCQ 110
G IV + NTY+PFC+
Sbjct: 399 GALIVNIYVFNTYIPFCE 416
>Z81515-11|CAB04199.2| 773|Caenorhabditis elegans Hypothetical
protein R06A4.7 protein.
Length = 773
Score = 28.3 bits (60), Expect = 4.2
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 57 GGYIVTFFFLNTYVPFCQ 110
G IV + NTY+PFC+
Sbjct: 399 GALIVNIYVFNTYIPFCE 416
>AF011893-1|AAC27124.1| 773|Caenorhabditis elegans maternal-effect
sterile 2 protein.
Length = 773
Score = 28.3 bits (60), Expect = 4.2
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 57 GGYIVTFFFLNTYVPFCQ 110
G IV + NTY+PFC+
Sbjct: 399 GALIVNIYVFNTYIPFCE 416
>U23528-2|AAK31387.1| 984|Caenorhabditis elegans
Calsyntenin/alcadein homolog protein1, isoform a
protein.
Length = 984
Score = 27.5 bits (58), Expect = 7.3
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = -2
Query: 161 TSGIRVLLYGIHGNGVLLTKRNISV*KKKSYNIT 60
T+G++ L + I+ +GVL T + ++ + KSY +T
Sbjct: 183 TNGLKELPFAINNHGVLRTTQPLNFTQSKSYILT 216
>AY091591-1|AAM00045.1| 984|Caenorhabditis elegans calsyntenin
protein.
Length = 984
Score = 27.5 bits (58), Expect = 7.3
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = -2
Query: 161 TSGIRVLLYGIHGNGVLLTKRNISV*KKKSYNIT 60
T+G++ L + I+ +GVL T + ++ + KSY +T
Sbjct: 183 TNGLKELPFAINNHGVLRTTQPLNFTQSKSYILT 216
>Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical
protein T21E8.1b protein.
Length = 1204
Score = 27.1 bits (57), Expect = 9.6
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +2
Query: 62 LYCNFFFFKHLCSVLSTKLRFRVY 133
LYC +++F + LST+LR + +
Sbjct: 693 LYCQYYYFGKVSEQLSTRLRIKSF 716
>Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical
protein T21E8.1a protein.
Length = 1263
Score = 27.1 bits (57), Expect = 9.6
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +2
Query: 62 LYCNFFFFKHLCSVLSTKLRFRVY 133
LYC +++F + LST+LR + +
Sbjct: 752 LYCQYYYFGKVSEQLSTRLRIKSF 775
>Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical
protein T21E8.2 protein.
Length = 1263
Score = 27.1 bits (57), Expect = 9.6
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +2
Query: 62 LYCNFFFFKHLCSVLSTKLRFRVY 133
LYC +++F + LST+LR + +
Sbjct: 752 LYCQYYYFGKVSEQLSTRLRIKSF 775
>Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical
protein B0457.1b protein.
Length = 1012
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +2
Query: 317 NTIHTNLVSVSPY--CIFNNICIYVFFFSFLISSK 415
N I L+++ Y CI + IC+ + FF++LI S+
Sbjct: 542 NEIDQTLLTLLTYVGCIISIICLLLTFFAYLIFSR 576
>Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical
protein B0457.1a protein.
Length = 1014
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +2
Query: 317 NTIHTNLVSVSPY--CIFNNICIYVFFFSFLISSK 415
N I L+++ Y CI + IC+ + FF++LI S+
Sbjct: 544 NEIDQTLLTLLTYVGCIISIICLLLTFFAYLIFSR 578
>AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-like
protein LAT-1B protein.
Length = 1012
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +2
Query: 317 NTIHTNLVSVSPY--CIFNNICIYVFFFSFLISSK 415
N I L+++ Y CI + IC+ + FF++LI S+
Sbjct: 542 NEIDQTLLTLLTYVGCIISIICLLLTFFAYLIFSR 576
>AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-like
protein LAT-1A protein.
Length = 1014
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +2
Query: 317 NTIHTNLVSVSPY--CIFNNICIYVFFFSFLISSK 415
N I L+++ Y CI + IC+ + FF++LI S+
Sbjct: 544 NEIDQTLLTLLTYVGCIISIICLLLTFFAYLIFSR 578
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,435,490
Number of Sequences: 27780
Number of extensions: 173317
Number of successful extensions: 481
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 481
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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