Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0584
         (579 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g30740.1 68415.m03749 serine/threonine protein kinase, putati...    28   3.9  
At2g30730.1 68415.m03748 serine/threonine protein kinase, putati...    28   3.9  
At1g63490.1 68414.m07179 transcription factor jumonji (jmjC) dom...    28   3.9  
At1g72300.1 68414.m08358 leucine-rich repeat transmembrane prote...    27   6.8  
At1g03990.1 68414.m00385 alcohol oxidase-related low similarity ...    27   6.8  

>At2g30740.1 68415.m03749 serine/threonine protein kinase, putative
           similar to Pto kinase interactor 1 (Pti1)[Lycopersicon
           esculentum] gi|3668069|gb|AAC61805
          Length = 366

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = +2

Query: 302 VQLLENTIHTNLVSVSPYCIFNNICIYVFFFSFLISSKGIKNGR 433
           V ++    H NL+ +  YC+  N+ +  + F+ + S   I +GR
Sbjct: 117 VSMVSRLKHENLIQLVGYCVDENLRVLAYEFATMGSLHDILHGR 160


>At2g30730.1 68415.m03748 serine/threonine protein kinase, putative
           similar to Pto kinase interactor 1 (serine/threonine
           protein kinase) [Lycopersicon esculentum]
           gi|3668069|gb|AAC61805; contains protein kinase domain,
           Pfam:PF00069
          Length = 338

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = +2

Query: 302 VQLLENTIHTNLVSVSPYCIFNNICIYVFFFSFLISSKGIKNGR 433
           V ++    H NL+ +  YC+  N+ +  + F+ + S   I +GR
Sbjct: 93  VSMVSRLKHENLIQLVGYCVDENLRVLAYEFATMGSLHDILHGR 136


>At1g63490.1 68414.m07179 transcription factor jumonji (jmjC)
           domain-containing protein similar to PLU-1 protein
           (GI:4902724) [Homo sapiens] and PLU1 (GI:22726257) [Mus
           musculus]; similar to Retinoblastoma-binding protein 2
           (RBBP-2) (SP:P29375) {Homo sapiens}; contains Pfam
           PF02373: jmjC domain
          Length = 1116

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
 Frame = +2

Query: 2   TRITCRMFL--SKVTCDVCFGRLYCNFFFFKHLCSVLSTKLRFRV-YRKEELE 151
           T I C+ FL  S + C+ C   ++     +KHLC    TKLR    Y   EL+
Sbjct: 275 TCIICQQFLHLSAIVCN-CRPSVFACLEHWKHLCECEPTKLRLEYRYTLAELD 326


>At1g72300.1 68414.m08358 leucine-rich repeat transmembrane protein
           kinase, putative similar to GI:3641252 from [Malus x
           domestica] (Plant Mol. Biol. 40 (6), 945-957 (1999))
          Length = 1095

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +2

Query: 302 VQLLENTIHTNLVSVSPYCIFNNICIYVFFF 394
           V++L    H NLV++  YC+ ++  I ++ F
Sbjct: 848 VEVLSRAKHENLVALQGYCVHDSARILIYSF 878


>At1g03990.1 68414.m00385 alcohol oxidase-related low similarity to
           long chain fatty alcohol oxidase from Candida cloacae
           [GI:6983581], Candida tropicalis [GI:6983594]; Location
           of EST 248L9T7, gb|AA713296
          Length = 758

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -1

Query: 525 LNILYLRFSIRLIIFN-NTATIPLSILFSHK*RPFLIPFEEIRNEKKKTYIQ 373
           L +L +R  +R++ F   T  +   +    K  PFL+ F E+  EK++  +Q
Sbjct: 95  LTVLVVRIVLRILTFRLGTLLLCGLVCLDKKHWPFLLKFSEMSLEKREKVLQ 146


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,503,851
Number of Sequences: 28952
Number of extensions: 149706
Number of successful extensions: 417
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 417
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1131744440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)