Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0583
(537 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_1751| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 1e-19
SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35) 83 1e-16
SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0) 77 9e-15
SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35) 72 3e-13
SB_22250| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 6e-13
SB_22249| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 1e-12
SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 4e-12
SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 3e-11
SB_31427| Best HMM Match : Tetraspannin (HMM E-Value=0) 65 4e-11
SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0) 63 2e-10
SB_26670| Best HMM Match : Tetraspannin (HMM E-Value=1.09301e-43) 61 5e-10
SB_23671| Best HMM Match : Tetraspannin (HMM E-Value=6.6e-38) 51 5e-07
SB_54678| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_3828| Best HMM Match : Tetraspannin (HMM E-Value=6.7e-08) 44 8e-05
SB_58139| Best HMM Match : Tetraspannin (HMM E-Value=0.2) 43 2e-04
SB_2984| Best HMM Match : Tetraspannin (HMM E-Value=9e-06) 41 6e-04
SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09) 37 0.009
SB_58401| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.012
SB_32096| Best HMM Match : Tetraspannin (HMM E-Value=1.1e-13) 34 0.085
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 33 0.15
SB_23414| Best HMM Match : Tetraspannin (HMM E-Value=3.8e-08) 32 0.26
SB_25740| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_57558| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_37997| Best HMM Match : Chordopox_A13L (HMM E-Value=2.1) 28 4.2
SB_38027| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_36694| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_23937| Best HMM Match : PAN (HMM E-Value=0.12) 28 5.6
>SB_1751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 341
Score = 93.5 bits (222), Expect = 1e-19
Identities = 52/155 (33%), Positives = 78/155 (50%)
Frame = +3
Query: 72 MALEGGMSCVKYLMFCFNLLFAITGLIILIVGIRAEINSYPYMNFTDENFYKXXXXXXXX 251
MAL+G + VK L+ FN +F + GLI+ VGI A Y+ N Y
Sbjct: 1 MALQGSSNIVKILVIIFNFIFFLFGLILFGVGIWASTKLGAYVEIASVN-YATGPRVVIA 59
Query: 252 XXXXXXXXXXXXCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNL 431
CCGA KEN CM+I F FLL++ + E+ G Y +E+ + +++
Sbjct: 60 VGFIIALVAFLGCCGAWKENKCMLICFFAFLLLLLILEIVGGALAYNNKDKIENRLDKDI 119
Query: 432 NASITQYPVDKNVQKTIDIIQTDLQCCGINSPADW 536
+I YP KN +K+I+ +QT +CCG ++ DW
Sbjct: 120 LKAIENYP-GKN-EKSINDMQTKFKCCGADNYTDW 152
Score = 28.3 bits (60), Expect = 4.2
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = +3
Query: 375 GIAGYMKHTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQTDLQCCGINSPADW 536
G+A + ++D + L I Y + + +D +Q ++CCGI + DW
Sbjct: 209 GLAIAVLVIQVKDELENELKNQIKSYT--GSARNAVDDMQKTVKCCGITTYEDW 260
>SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35)
Length = 642
Score = 83.0 bits (196), Expect = 1e-16
Identities = 41/131 (31%), Positives = 65/131 (49%)
Frame = +3
Query: 144 GLIILIVGIRAEINSYPYMNFTDENFYKXXXXXXXXXXXXXXXXXXXXCCGAVKENHCMI 323
G+ ++ G AEI PY++ + +F CCGA KEN CM+
Sbjct: 378 GIALVGYGAYAEIKFGPYISISSNDFMSGSRLLIAVGCIITIIAFFG-CCGAWKENKCML 436
Query: 324 ITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQTDL 503
I F + LLI+ E+A + GY+ ++ + ++ +I +YP KN + ID +Q D
Sbjct: 437 ILFFILLLIVLGLEIAAAVLGYINKDKIQSDLTDDIIRNIKEYP--KNNKAAIDAMQMDF 494
Query: 504 QCCGINSPADW 536
+CCG P+DW
Sbjct: 495 ECCGAKGPSDW 505
>SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 252
Score = 77.0 bits (181), Expect = 9e-15
Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 7/162 (4%)
Frame = +3
Query: 72 MALEGGMSCVKYLMFCFNLLFAITGLIILIVGI-----RAEINSYPYMNFTDENFYKXXX 236
M+ + G C+K+++F FNLLF + G I +G+ + E+ Y T YK
Sbjct: 1 MSTDWGFKCIKFMVFFFNLLFLLAGCAIFAIGVWIISSKDEVAG-DYSRLTGTINYKTAP 59
Query: 237 XXXXXXXXXXXXXXXXXCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDS 416
CCGA+KE+ CM+ T+ + IF E+ + Y+ +E +
Sbjct: 60 ILCIVIGIVTVIVAFLACCGALKESQCMLGTYFGLVTAIFCLEVTAIVLAYVYRERIEKN 119
Query: 417 VMRNLNASITQYPVDKN--VQKTIDIIQTDLQCCGINSPADW 536
+ ++ +++ +Y + + V + ID I D +CCG DW
Sbjct: 120 LHGDIRSTMNEYHLSGHDAVTRAIDEIHRDFKCCGNAQYRDW 161
>SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35)
Length = 286
Score = 71.7 bits (168), Expect = 3e-13
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 4/152 (2%)
Frame = +3
Query: 93 SCVKYLMFCFNLLFAITGLIILIVGIRAEINSYPYMNFTD----ENFYKXXXXXXXXXXX 260
+C+KY + N +F + G++++ GI + TD ++F
Sbjct: 22 TCIKYTLLFVNAIFCVLGILLMFDGIYIFLRLKFENELTDWFKLQSFMLYMPTLLFFTGF 81
Query: 261 XXXXXXXXXCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNAS 440
C GA+KEN + ++ +F+ + +A G+ +++ L D R L
Sbjct: 82 SLYLIVFFGCVGALKENTLFLASYGIFIFCCLIPIIAAGVLAFLQREKLVDPKAR-LEDG 140
Query: 441 ITQYPVDKNVQKTIDIIQTDLQCCGINSPADW 536
+ Y D + Q+ ID IQT +CCGI S DW
Sbjct: 141 LKSYQQDSSKQEFIDFIQTRFKCCGIESYKDW 172
>SB_22250| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 313
Score = 70.9 bits (166), Expect = 6e-13
Identities = 45/150 (30%), Positives = 64/150 (42%), Gaps = 3/150 (2%)
Frame = +3
Query: 96 CVKYLMFCFNLLFAITGLIILIVGIRAEINSYPYMN-FTDENFYKXXXXXXXXXXXXXXX 272
CVKY +F N++F + G +IL VGI I + D NF
Sbjct: 59 CVKYSLFTINVIFWLAGAVILAVGIFIFIEMKEEITKLADLNFQPAVIFLALGGLLFVIT 118
Query: 273 XXXXXCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQY 452
C GA++EN C++ + II + G G+ LE V L +I Y
Sbjct: 119 IFG--CIGALRENRCLLTAYIWMCGIILAGMIVCGGLGFYYKDVLETKVTAQLKDAIVLY 176
Query: 453 --PVDKNVQKTIDIIQTDLQCCGINSPADW 536
P ++ ID +QT+LQCCG+ DW
Sbjct: 177 RDPTKGDLHLIIDTVQTELQCCGVQGLNDW 206
>SB_22249| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 296
Score = 69.7 bits (163), Expect = 1e-12
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 2/150 (1%)
Frame = +3
Query: 93 SCVKYLMFCFNLLFAITGLIILIVGIRAEINSYPYMNFTDENFYKXXXXXXXXXXXXXXX 272
+C+KY++F N++F + G++IL++G N D Y+
Sbjct: 37 TCIKYILFFVNVVFWVFGVLILVIGSYLMTEFKNAWNL-DSILYEPSVVILIVGILLFLI 95
Query: 273 XXXXXCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQY 452
C GA++EN ++ + + + + ++ GIA YM +D V+ L + Y
Sbjct: 96 ATVG-CIGALRENTILLAIYGGAVTLCLIFLVSAGIAVYMH----QDKVVEKLKDDLKHY 150
Query: 453 --PVDKNVQKTIDIIQTDLQCCGINSPADW 536
P +N Q ID +QT+L+CCG+NS DW
Sbjct: 151 RDPDKENFQFLIDRLQTNLKCCGVNSYTDW 180
>SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 68.1 bits (159), Expect = 4e-12
Identities = 35/133 (26%), Positives = 62/133 (46%)
Frame = +3
Query: 138 ITGLIILIVGIRAEINSYPYMNFTDENFYKXXXXXXXXXXXXXXXXXXXXCCGAVKENHC 317
+ G +++ VG+ A Y F + C GA++EN C
Sbjct: 16 LVGCLLVSVGLYARFEKTAYQEFFSD-ILTDPAFALIIVGGIMFILGFSGCIGALRENIC 74
Query: 318 MIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQT 497
++ FSV L IIF +LA+G+ ++ +E ++ L ++T+Y + ++Q ID +Q
Sbjct: 75 LLKFFSVVLAIIFFLQLALGVFVFVFQDKVEAVIVEKLQTAVTKYRDNADLQNLIDGVQQ 134
Query: 498 DLQCCGINSPADW 536
+ +CCG DW
Sbjct: 135 EFKCCGAKGINDW 147
>SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 514
Score = 65.3 bits (152), Expect = 3e-11
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Frame = +3
Query: 288 CCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQY--PVD 461
CCGA+KE+ C++ TF L II E+ GY+ +E+ + +++N +I Y
Sbjct: 344 CCGAIKEHRCLLATFFALLFIILAVEITGTALGYVYRNKVEEQLGKDMNDTIVSYGEKGK 403
Query: 462 KNVQKTIDIIQTDLQCCGINSPADW 536
+ + D IQ +CCGIN DW
Sbjct: 404 EGITDAYDAIQKKEKCCGINGFKDW 428
>SB_31427| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 299
Score = 64.9 bits (151), Expect = 4e-11
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 2/150 (1%)
Frame = +3
Query: 93 SCVKYLMFCFNLLFAITGLIILIVGIRAEINSYPYMNFTDENFYKXXXXXXXXXXXXXXX 272
+C+KY++F N++F + G++IL++G N D Y+
Sbjct: 37 TCIKYILFFVNVVFWVFGVLILVIGSYLMTEFKNAWNL-DSILYEPSVVILIVGILLFLI 95
Query: 273 XXXXXCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQY 452
C GA++EN ++ + + + + ++ G A Y+ D V+ L + Y
Sbjct: 96 ATVG-CIGALRENTILLAIYGGAVTLCLILLVSAGTAVYIHR----DKVVAKLKDDLQHY 150
Query: 453 --PVDKNVQKTIDIIQTDLQCCGINSPADW 536
P +N Q ID +QT+L+CCGINS DW
Sbjct: 151 RDPDKENFQFLIDRLQTNLKCCGINSYNDW 180
>SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 280
Score = 62.9 bits (146), Expect = 2e-10
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 5/152 (3%)
Frame = +3
Query: 96 CVKYLMFCFNLLFAITGLIILIVGI-RAEINSYPYMNFTD----ENFYKXXXXXXXXXXX 260
C KY +F N++F I GL+++ VG+ + D E+ +
Sbjct: 27 CTKYTLFFINVIFFILGLLVMTVGVYMVKELKKDLKGVQDWLKLESTFHWPVVIFFVIGI 86
Query: 261 XXXXXXXXXCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNAS 440
C GA++EN C + + + + + +A G Y + D ++ L
Sbjct: 87 LMFFIGFFGCVGALRENTCFLTVYGTSVFLCLILLIACGAVAYTQK-DKVQALKERLKQD 145
Query: 441 ITQYPVDKNVQKTIDIIQTDLQCCGINSPADW 536
+ +Y D Q ID +QT L+CCG+ S DW
Sbjct: 146 LKKYLDDPLNQDLIDFMQTLLKCCGVESYKDW 177
>SB_26670| Best HMM Match : Tetraspannin (HMM E-Value=1.09301e-43)
Length = 211
Score = 61.3 bits (142), Expect = 5e-10
Identities = 46/163 (28%), Positives = 69/163 (42%), Gaps = 12/163 (7%)
Frame = +3
Query: 84 GGMSCVKYLMFCFNLLFAITGLIILIVGIRAEINSYPYMNFTDENFYKXXXXXXXXXXXX 263
G +K L+ FN+LF I G+ ++ VG AE+ ++ + Y
Sbjct: 7 GAGRILKILVVFFNVLFFIFGIALIAVGAWAEVQYGEFIEVSSVP-YATGSRLVIAVGVI 65
Query: 264 XXXXXXXXCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYM---KHTDLEDSVM--RN 428
C GA KEN CM+ TF V LLI+ E+A + Y K++ DSV
Sbjct: 66 IAIVSFFGCLGAWKENRCMLGTFFVLLLILLTLEIAAAVLAYNYRGKNSLNSDSVKVKDE 125
Query: 429 LNASITQY-------PVDKNVQKTIDIIQTDLQCCGINSPADW 536
+ + +T+ V K D +Q +CCG+N DW
Sbjct: 126 IESDLTKALKGDYGSSGQDGVTKAFDALQEKQKCCGVNGYLDW 168
>SB_23671| Best HMM Match : Tetraspannin (HMM E-Value=6.6e-38)
Length = 919
Score = 51.2 bits (117), Expect = 5e-07
Identities = 26/127 (20%), Positives = 54/127 (42%)
Frame = +3
Query: 120 FNLLFAITGLIILIVGIRAEINSYPYMNFTDENFYKXXXXXXXXXXXXXXXXXXXXCCGA 299
FN + +G+ IL VGI + Y + + Y C
Sbjct: 22 FNTILLFSGIAILAVGIWVITSRSQYNSLLSNDNYVTVPGLMIAAGCLVIIVCVVGCVAV 81
Query: 300 VKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVDKNVQKT 479
+KEN +++++ + L++IF+ E+A G+ + +++ + + + +Y V K
Sbjct: 82 IKENRFILVSYLIMLVLIFILEIATGVVAVIYRSEISYELEVGIRGKMNRYGFTDAVTKA 141
Query: 480 IDIIQTD 500
ID +Q +
Sbjct: 142 IDDLQKE 148
>SB_54678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +3
Query: 321 IITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQTD 500
I+ + V L ++F E+ G + + V + + Y D ++Q ID IQ++
Sbjct: 17 IVWYMVVLAVLFTLEIIAGFLSFFFVEETRSKVSSAIKLFVVHYQDDLDLQNAIDGIQSN 76
Query: 501 LQCCGINSPADW 536
L+CCG S DW
Sbjct: 77 LKCCGGYSYHDW 88
>SB_3828| Best HMM Match : Tetraspannin (HMM E-Value=6.7e-08)
Length = 542
Score = 44.0 bits (99), Expect = 8e-05
Identities = 37/157 (23%), Positives = 60/157 (38%), Gaps = 2/157 (1%)
Frame = +3
Query: 72 MALEGGMSCVKYLMFCFNLLFAITGLIILIVGIRAEINSYPYMNFTDENFYKXXXXXXXX 251
MAL+G V + + F LF ITGL ++I G Y + + F
Sbjct: 10 MALDGP-KVVTFCILGFTALFLITGLGLIIFGSTLTTPFGEYFSLRKDAF-DTQVGLRVG 67
Query: 252 XXXXXXXXXXXXCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTD--LEDSVMR 425
GA K+N+ ++ +V +IFV E+++G + + S
Sbjct: 68 LILLILAISAVTILGAFKQNNRVLTILAVLFFVIFVTEISLGANSLTLRNEGISKSSTSA 127
Query: 426 NLNASITQYPVDKNVQKTIDIIQTDLQCCGINSPADW 536
+ ++ Y V + ID Q CCG+ DW
Sbjct: 128 SGLQLLSIYGEHPGVTEMIDNTQMGSMCCGVTDYRDW 164
>SB_58139| Best HMM Match : Tetraspannin (HMM E-Value=0.2)
Length = 108
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/79 (22%), Positives = 41/79 (51%)
Frame = +3
Query: 300 VKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVDKNVQKT 479
+K ++ + + +++I + ++ G+ + ++ SV ++ I Y + ++Q
Sbjct: 1 MKADNVFLFQYKWVIVVIVILQVLGGLLAFAFWPNVRKSVQNQISKGIVNYRDNLDLQNI 60
Query: 480 IDIIQTDLQCCGINSPADW 536
ID IQ + +CCG +S DW
Sbjct: 61 IDGIQENFKCCGSSSINDW 79
>SB_2984| Best HMM Match : Tetraspannin (HMM E-Value=9e-06)
Length = 187
Score = 41.1 bits (92), Expect = 6e-04
Identities = 33/136 (24%), Positives = 55/136 (40%), Gaps = 25/136 (18%)
Frame = +3
Query: 123 NLLFAITGLIILIVGIRAEINSYPYMNFTDENFYKXXXXXXXXXXXXXXXXXXXXCCGAV 302
+L+F + GL +L VGI A I YM + + Y CCGA+
Sbjct: 39 HLVFQLMGLSVLAVGIWARIQFSDYMKLSSHD-YATAAYILIGIGFLIAIIGFIGCCGAL 97
Query: 303 KENHCMIIT-------------------------FSVFLLIIFVAELAVGIAGYMKHTDL 407
KE+ C++ T F V L ++F+ EL I GY+ +++
Sbjct: 98 KEHTCLLKTVSIKSILYGYMYAKKISLTIRIYLQFGVILGLLFLVELGTAITGYIFRSEI 157
Query: 408 EDSVMRNLNASITQYP 455
+ + L+ ++ YP
Sbjct: 158 KTGLSDGLDTALKDYP 173
>SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09)
Length = 669
Score = 37.1 bits (82), Expect = 0.009
Identities = 17/69 (24%), Positives = 30/69 (43%)
Frame = +3
Query: 129 LFAITGLIILIVGIRAEINSYPYMNFTDENFYKXXXXXXXXXXXXXXXXXXXXCCGAVKE 308
L+ I G+ ++ VGI +++ Y + ++ + CCGAVKE
Sbjct: 164 LYQIAGIAVMSVGIWTRVSANEYASLMGQSGFTAAANIMIAAGALVMFIGFVGCCGAVKE 223
Query: 309 NHCMIITFS 335
N C ++ S
Sbjct: 224 NKCFLLLVS 232
Score = 30.3 bits (65), Expect = 1.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 87 GMSCVKYLMFCFNLLFAITGLI 152
GM C+KYL+F FN +F + +I
Sbjct: 76 GMQCMKYLLFAFNFVFWCSKII 97
>SB_58401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 426
Score = 36.7 bits (81), Expect = 0.012
Identities = 18/69 (26%), Positives = 31/69 (44%)
Frame = +3
Query: 123 NLLFAITGLIILIVGIRAEINSYPYMNFTDENFYKXXXXXXXXXXXXXXXXXXXXCCGAV 302
N ++GL +L +GI ++++ + +F + Y CCGAV
Sbjct: 277 NQFALLSGLAVLGIGIWTKVDAGQFDSFLGSSGYSIPAWTMIGAGAFVTFVGFFGCCGAV 336
Query: 303 KENHCMIIT 329
KE+ CM+ T
Sbjct: 337 KESRCMLAT 345
>SB_32096| Best HMM Match : Tetraspannin (HMM E-Value=1.1e-13)
Length = 174
Score = 33.9 bits (74), Expect = 0.085
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +3
Query: 309 NHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVDKNVQKTIDI 488
N ++ T V LI +A I + + S++ +L I +P + +D
Sbjct: 32 NRVLMFTGCVLALISLAGIVAAIINSKVFLIIINRSILADLKNRIKNFPGPGT--RVVDS 89
Query: 489 IQTDLQCCGINS-PADW 536
IQ LQCCG +S P DW
Sbjct: 90 IQERLQCCGADSGPNDW 106
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 33.1 bits (72), Expect = 0.15
Identities = 32/133 (24%), Positives = 51/133 (38%)
Frame = +3
Query: 138 ITGLIILIVGIRAEINSYPYMNFTDENFYKXXXXXXXXXXXXXXXXXXXXCCGAVKENHC 317
+ GL +L VGI A I YM + + Y CCGA+KE+ C
Sbjct: 186 LMGLSVLAVGIWARIQFSDYMKLSSHD-YATAAYILIGIGFLIAIIGFIGCCGALKEHTC 244
Query: 318 MIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQT 497
++ T T L D L+ ++ YP ++ + + +Q
Sbjct: 245 LLKTIK---------------------TGLSDG----LDTALKDYP-EQGFKDAWNDMQK 278
Query: 498 DLQCCGINSPADW 536
+L+CCG + DW
Sbjct: 279 NLKCCGSRNYTDW 291
>SB_23414| Best HMM Match : Tetraspannin (HMM E-Value=3.8e-08)
Length = 357
Score = 32.3 bits (70), Expect = 0.26
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +3
Query: 348 IIFVA-ELAVGIAGYMKHTDLEDSVMRNLNAS--ITQYPVDKNVQKTIDIIQTDLQCCGI 518
+IF+ E+ V + G ++ + + +N S I Y D +++ +D IQ +L+CCG
Sbjct: 135 VIFITFEIIVMVFGIIQSSRVPTDTREIVNWSVFILNYQ-DDSIRDDLDSIQKNLKCCGF 193
Query: 519 NSPADW 536
DW
Sbjct: 194 KDYNDW 199
>SB_25740| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 678
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +2
Query: 134 CHYGIDHPDSWHQG*NKLVSLHELHR*ELLQVRSDRSHH 250
C+Y + PD+W + + SL R E++ R S+H
Sbjct: 120 CYYSLQPPDNWDKKKTSIQSLCSRERKEVITSRYQTSNH 158
>SB_57558| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 733
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 184 FISALMPTIRMINPVMANRRLKQNMRYF 101
FI+ALM I +I +M + L++ M YF
Sbjct: 39 FITALMGNIILITVIMKTKSLRRTMNYF 66
>SB_37997| Best HMM Match : Chordopox_A13L (HMM E-Value=2.1)
Length = 440
Score = 28.3 bits (60), Expect = 4.2
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 182 KLVSLHELHR*ELLQVRSDRSHHCRHYCFHCRVLRLLW 295
K+ LHE+ L++ S++ H R YC+ R L W
Sbjct: 56 KITKLHEIT--VFLRLTSNKEHKRRLYCYFLRTYVLFW 91
>SB_38027| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 316
Score = 28.3 bits (60), Expect = 4.2
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +3
Query: 291 CGAVKENHCMIITFSVFLLIIFVAELAVGI 380
C + N C++ T+ F+LI+ VAE+ + +
Sbjct: 38 CALLYMNPCLLKTYFSFMLILVVAEVTIAV 67
>SB_36694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1803
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +2
Query: 224 QVRSDRSHHCRHYCFHCRVLRLLWRCQREPLHDNNVFSIPLDHIR 358
QV +H C+ + V+ L W ++E + D+ + SI +D I+
Sbjct: 321 QVFEPLTHLCQEHGLAFEVVDLRWGVRQESVEDHCIVSICMDEIK 365
>SB_23937| Best HMM Match : PAN (HMM E-Value=0.12)
Length = 270
Score = 27.9 bits (59), Expect = 5.6
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +3
Query: 399 TDLEDSVMRNLNASITQYPVDKNVQKTIDII--QTDLQCCG 515
T L S++R + YP+D KTID+ TDL CG
Sbjct: 211 TALMSSMVRVCFRTNKSYPMDMGASKTIDVYCQMTDLLNCG 251
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,031,083
Number of Sequences: 59808
Number of extensions: 312240
Number of successful extensions: 855
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1215643300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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