Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0580
         (585 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    26   0.20 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   1.9  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   1.9  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   5.8  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    21   5.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   5.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.7  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 26.2 bits (55), Expect = 0.20
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +2

Query: 248 LVQICKMAQVYPHPAPEGCTSASSESAPSDQPIYPDTG 361
           L  + ++  VYP+     C   + E++ SD P +P  G
Sbjct: 182 LETLSQLMDVYPNNDGTKCLVVTDEASISDAPFFPHRG 219


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
 Frame = +2

Query: 278 YPHP--APEGCTSASSESAPSDQPIYPDTG 361
           YP+P  +PE    A+S   PS  P+ P  G
Sbjct: 172 YPYPILSPEMSQVAASWHTPSMYPLSPGAG 201


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
 Frame = +2

Query: 278 YPHP--APEGCTSASSESAPSDQPIYPDTG 361
           YP+P  +PE    A+S   PS  P+ P  G
Sbjct: 64  YPYPILSPEMSQVAASWHTPSMYPLSPGAG 93


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 327 PPPINQFTQTLDKTTAKVLFKILE 398
           P P  Q+T+T  KT   V   +LE
Sbjct: 248 PIPYIQYTETETKTWGSVFNTVLE 271


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 485 TKEAQHHPIRHKHSHQA 535
           TK   HH I+ +H HQ+
Sbjct: 101 TKFNPHHEIKLQHLHQS 117


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 311  ASSESAPSDQPIYPD 355
            ASS  APS  P+ PD
Sbjct: 2288 ASSTMAPSTTPMVPD 2302


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -2

Query: 275 LGPSYKSGQVTSWLNALTNSKVLWPLLE 192
           +  + K G   + + A  +S V+WPL+E
Sbjct: 211 INENLKMGLDIASITAQASSFVVWPLVE 238


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -2

Query: 275 LGPSYKSGQVTSWLNALTNSKVLWPLLE 192
           +  + K G   + + A  +S V+WPL+E
Sbjct: 211 INENLKMGLDIASITAQASSFVVWPLVE 238


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,349
Number of Sequences: 336
Number of extensions: 2123
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14621740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)