Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0579
         (575 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    24   0.81 
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   3.3  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   3.3  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   7.5  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   9.9  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   9.9  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   9.9  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   9.9  

>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 24.2 bits (50), Expect = 0.81
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -1

Query: 212 VDPVSWKNDLFVVNSLMKSFSFTYGST 132
           VD   WK  +F +++L  +F  T+G T
Sbjct: 514 VDYSLWKALIFQISNLQTTFGGTFGDT 540


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -3

Query: 543 LQNLHRHGHEL 511
           +Q+LHR GHE+
Sbjct: 235 VQDLHRRGHEI 245


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -3

Query: 543 LQNLHRHGHEL 511
           +Q+LHR GHE+
Sbjct: 242 VQDLHRRGHEI 252


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = +3

Query: 6   GVFKKKWR 29
           G+F+KKWR
Sbjct: 197 GIFQKKWR 204


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -3

Query: 543 LQNLHRHGHEL 511
           +Q +HR GHE+
Sbjct: 243 VQEMHRKGHEI 253


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 406 NVDLHTDIDPLSKYL 362
           +VD+  D+  LSKYL
Sbjct: 185 SVDISYDVPALSKYL 199


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = -2

Query: 49  RERKVVYLHFFLKT 8
           RE++ + +HFFL++
Sbjct: 128 REKRRIKIHFFLRS 141


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +3

Query: 210 DP*RTLTSCCAFSYLSTSS 266
           DP   L S  AFSY+  SS
Sbjct: 143 DPDDELRSSSAFSYIKPSS 161


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,814
Number of Sequences: 336
Number of extensions: 2553
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)