Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0579
         (575 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X65550-1|CAA46519.1| 3256|Homo sapiens antigen of the monoclonal...    31   2.9  
AL390236-1|CAH73169.1| 3256|Homo sapiens antigen identified by m...    31   2.9  
AL355529-1|CAI16902.1| 3256|Homo sapiens antigen identified by m...    31   2.9  
AJ567755-1|CAD99005.1|  162|Homo sapiens KI67 Antigen protein.         31   2.9  
BC009786-1|AAH09786.1|  164|Homo sapiens NOC2L protein protein.        30   6.7  
BC101523-1|AAI01524.1|  129|Homo sapiens glycoprotein hormone al...    29   8.9  
BC093962-1|AAH93962.1|  129|Homo sapiens glycoprotein hormone al...    29   8.9  
BC093960-1|AAH93960.1|  129|Homo sapiens glycoprotein hormone al...    29   8.9  
AF260739-1|AAK51638.1|  129|Homo sapiens cysteine knot protein p...    29   8.9  

>X65550-1|CAA46519.1| 3256|Homo sapiens antigen of the monoclonal
           antibody Ki-67 protein.
          Length = 3256

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 14/47 (29%), Positives = 28/47 (59%)
 Frame = -1

Query: 338 KAELHNDPFIVPFLSQFFQVEPREATSR*IRKSTTGGQSTLGVDPVS 198
           + E+HN+PF+  +L+Q  +   +++ S+  +  TT GQ   G+  +S
Sbjct: 436 ETEIHNEPFLTLWLTQVERKIQKDSLSKPEKLGTTAGQMCSGLPGLS 482


>AL390236-1|CAH73169.1| 3256|Homo sapiens antigen identified by
           monoclonal antibody Ki-67 protein.
          Length = 3256

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 14/47 (29%), Positives = 28/47 (59%)
 Frame = -1

Query: 338 KAELHNDPFIVPFLSQFFQVEPREATSR*IRKSTTGGQSTLGVDPVS 198
           + E+HN+PF+  +L+Q  +   +++ S+  +  TT GQ   G+  +S
Sbjct: 436 ETEIHNEPFLTLWLTQVERKIQKDSLSKPEKLGTTAGQMCSGLPGLS 482


>AL355529-1|CAI16902.1| 3256|Homo sapiens antigen identified by
           monoclonal antibody Ki-67 protein.
          Length = 3256

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 14/47 (29%), Positives = 28/47 (59%)
 Frame = -1

Query: 338 KAELHNDPFIVPFLSQFFQVEPREATSR*IRKSTTGGQSTLGVDPVS 198
           + E+HN+PF+  +L+Q  +   +++ S+  +  TT GQ   G+  +S
Sbjct: 436 ETEIHNEPFLTLWLTQVERKIQKDSLSKPEKLGTTAGQMCSGLPGLS 482


>AJ567755-1|CAD99005.1|  162|Homo sapiens KI67 Antigen protein.
          Length = 162

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 14/47 (29%), Positives = 28/47 (59%)
 Frame = -1

Query: 338 KAELHNDPFIVPFLSQFFQVEPREATSR*IRKSTTGGQSTLGVDPVS 198
           + E+HN+PF+  +L+Q  +   +++ S+  +  TT GQ   G+  +S
Sbjct: 105 ETEIHNEPFLTLWLTQVERKIQKDSLSKPEKLGTTAGQMCSGLPGLS 151


>BC009786-1|AAH09786.1|  164|Homo sapiens NOC2L protein protein.
          Length = 164

 Score = 29.9 bits (64), Expect = 6.7
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -2

Query: 121 PLKALYLYIPCMTNECSLQNSMQYRERKVV 32
           P    Y +I C+ + CS+ NS+  RER +V
Sbjct: 107 PFSLTYSFIRCLLSSCSVPNSVLGRERMLV 136


>BC101523-1|AAI01524.1|  129|Homo sapiens glycoprotein hormone alpha
           2 protein.
          Length = 129

 Score = 29.5 bits (63), Expect = 8.9
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +2

Query: 434 CPAEMGLNDLEV*AQC-GPRERKLHLHSSCPCLCKFCRVS 550
           C    GL  ++V  QC G R  +L + ++  C C  CR+S
Sbjct: 88  CCTISGLKKVKVQLQCVGSRREELEIFTARACQCDMCRLS 127


>BC093962-1|AAH93962.1|  129|Homo sapiens glycoprotein hormone alpha
           2 protein.
          Length = 129

 Score = 29.5 bits (63), Expect = 8.9
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +2

Query: 434 CPAEMGLNDLEV*AQC-GPRERKLHLHSSCPCLCKFCRVS 550
           C    GL  ++V  QC G R  +L + ++  C C  CR+S
Sbjct: 88  CCTISGLKKVKVQLQCVGSRREELEIFTARACQCDMCRLS 127


>BC093960-1|AAH93960.1|  129|Homo sapiens glycoprotein hormone alpha
           2 protein.
          Length = 129

 Score = 29.5 bits (63), Expect = 8.9
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +2

Query: 434 CPAEMGLNDLEV*AQC-GPRERKLHLHSSCPCLCKFCRVS 550
           C    GL  ++V  QC G R  +L + ++  C C  CR+S
Sbjct: 88  CCTISGLKKVKVQLQCVGSRREELEIFTARACQCDMCRLS 127


>AF260739-1|AAK51638.1|  129|Homo sapiens cysteine knot protein
           protein.
          Length = 129

 Score = 29.5 bits (63), Expect = 8.9
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +2

Query: 434 CPAEMGLNDLEV*AQC-GPRERKLHLHSSCPCLCKFCRVS 550
           C    GL  ++V  QC G R  +L + ++  C C  CR+S
Sbjct: 88  CCTISGLKKVKVQLQCVGSRREELEIFTARACQCDMCRLS 127


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,938,211
Number of Sequences: 237096
Number of extensions: 1486809
Number of successful extensions: 2897
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2897
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)