Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0579
         (575 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X17551-2|CAA35587.1|  888|Drosophila melanogaster protein ( D.me...    29   3.4  
AY047531-1|AAK77263.1|  888|Drosophila melanogaster GH03753p pro...    29   3.4  
AF237761-2|AAF81411.1|  908|Drosophila melanogaster unknown prot...    29   3.4  

>X17551-2|CAA35587.1|  888|Drosophila melanogaster protein (
           D.melanogaster white-one mutant DNA with Doc retroposon,
           inserted inwhite locuspromoter region.  ).
          Length = 888

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -2

Query: 451 SHFCRATVGSPWYVKNVDLHTDI 383
           S   R   G+PWY++N ++H D+
Sbjct: 817 SRILRIITGAPWYLRNENIHRDL 839


>AY047531-1|AAK77263.1|  888|Drosophila melanogaster GH03753p
           protein.
          Length = 888

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -2

Query: 451 SHFCRATVGSPWYVKNVDLHTDI 383
           S   R   G+PWY++N ++H D+
Sbjct: 817 SRILRIITGAPWYLRNENIHRDL 839


>AF237761-2|AAF81411.1|  908|Drosophila melanogaster unknown
           protein.
          Length = 908

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -2

Query: 466 LQVI*SHFCRATVGSPWYVKNVDLHTDIDPLSKYLKRQNAHSKK 335
           +Q I +   R   G  W+V+N  LH D+  L+      N HS +
Sbjct: 821 IQAIQNKVARLITGCEWFVRNTTLHRDL-KLATVFDEINKHSSR 863


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,169,524
Number of Sequences: 53049
Number of extensions: 474376
Number of successful extensions: 1046
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1046
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2276053890
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)