Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0579
         (575 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    26   0.23 
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    26   0.31 
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    26   0.31 
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    26   0.31 
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    22   3.8  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   3.8  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   6.6  
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    21   8.7  

>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 26.2 bits (55), Expect = 0.23
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -1

Query: 239 TTGGQSTLGVDPVSWKNDLFVVNSLMKSFSFTYGSTQGT 123
           T   + + G+   SW N++F    L  +  FTY  T  T
Sbjct: 83  TLVAEQSYGLTLPSWTNNIFPKGELFDATVFTYNITNST 121


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 25.8 bits (54), Expect = 0.31
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -1

Query: 239 TTGGQSTLGVDPVSWKNDLFVVNSLMKSFSFTYGSTQGT 123
           T   + + G+   SW N++F    L  +  FTY  T  T
Sbjct: 180 TLVAEQSYGLTLPSWTNNIFPRGELFDATVFTYNITNST 218


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 25.8 bits (54), Expect = 0.31
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -1

Query: 239 TTGGQSTLGVDPVSWKNDLFVVNSLMKSFSFTYGSTQGT 123
           T   + + G+   SW N++F    L  +  FTY  T  T
Sbjct: 195 TLVAEQSYGLTLPSWTNNIFPRGELFDATVFTYNITNST 233


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 25.8 bits (54), Expect = 0.31
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -3

Query: 69  YKILCNIENVKL 34
           YK+ CN+ENVKL
Sbjct: 200 YKMFCNLENVKL 211



 Score = 21.8 bits (44), Expect = 5.0
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -2

Query: 448 HFCRATVGSPWYVKNVDLHTDIDPLSKYLKR 356
           H  R   G+P Y  N   + DID +++ ++R
Sbjct: 461 HKIRVPPGTPIYECNKRCNCDIDCINRVVQR 491


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 347 SFEKAELHNDPFIVPFLSQFFQVEPR 270
           S ++  +HNDP +V   S   +  PR
Sbjct: 27  SSQRGNVHNDPLVVETTSGLVRGFPR 52


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 347 SFEKAELHNDPFIVPFLSQFFQVEPR 270
           S ++  +HNDP +V   S   +  PR
Sbjct: 27  SSQRGNVHNDPLVVETTSGLVRGFPR 52


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 343 SKKRSYTTTLSSYPFFRN 290
           S++  YT  L S P F+N
Sbjct: 206 SRQAEYTDFLKSVPIFKN 223


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 1   HEEFLKKNGGIQLYVLDI 54
           HE+ L +N G+   VLD+
Sbjct: 286 HEQRLLRNVGVHTVVLDL 303


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,581
Number of Sequences: 438
Number of extensions: 3565
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16626408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)