Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0577
         (594 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    22   3.4  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   3.4  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    22   3.4  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    22   4.5  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   4.5  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   5.9  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   5.9  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   7.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.8  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 554 FGAVTVSTPSEDNVLTRS 501
           FG V +S P+E+ V+T S
Sbjct: 53  FGGVQISPPNENLVVTSS 70


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 554 FGAVTVSTPSEDNVLTRS 501
           FG V +S P+E+ V+T S
Sbjct: 54  FGGVQISPPNENLVVTSS 71


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 554 FGAVTVSTPSEDNVLTRS 501
           FG V +S P+E+ V+T S
Sbjct: 54  FGGVQISPPNENLVVTSS 71


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 304 STINLTKEKFEVILDVQQFTPDEITV 381
           S INL KE+F+ +  +Q+    E+ V
Sbjct: 31  SDINLIKEEFDELGRLQRICNGEVAV 56


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -1

Query: 111 WYYRHLFYLKFVVS 70
           WY + +FY K ++S
Sbjct: 226 WYSKKVFYSKIIIS 239


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +2

Query: 485 PDTRSTTWSARCLPTACSPSRRRNDLHLMPAKG 583
           P T    +S   L    +PS++R  LH+  A G
Sbjct: 141 PSTNELVFSEVLLFLDYNPSQKRQFLHITLASG 173


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +1

Query: 496 VNDLVSTLSSDGVLTVTAP 552
           VN+ V   S + VLTVTAP
Sbjct: 309 VNNSVGGESVETVLTVTAP 327


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 11/53 (20%), Positives = 25/53 (47%)
 Frame = +1

Query: 313 NLTKEKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRR 471
           ++ K+ +  + D+++  P    + +      V G+ EEK  ++  +    TRR
Sbjct: 80  DVIKDNYRKVTDLKKRFPKLKVLLSVGGNADVSGQDEEKNIKYRNLLETTTRR 132


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +2

Query: 434  TSTASFPVSSPAGTSCRPDTRSTTWSARCLPTACSP 541
            TS ++    +P  T+  P+ + T W     PT+  P
Sbjct: 1350 TSVSTTTSWNPGSTTNYPEWQPTEWHPPIPPTSEKP 1385


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,440
Number of Sequences: 336
Number of extensions: 2413
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14935063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)