Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0577
(594 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0227 + 1933247-1933699 42 3e-04
01_01_0599 - 4448290-4448790 42 5e-04
02_05_0972 + 33198035-33198277,33198366-33198641 40 0.001
01_01_0229 - 1943473-1943922 37 0.011
01_01_0231 + 1951047-1951499 36 0.018
01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457 36 0.018
11_02_0041 - 7669692-7670312 36 0.032
03_02_0485 - 8808139-8808618 36 0.032
03_02_0483 - 8804021-8804485 36 0.032
02_02_0077 - 6586638-6587165 36 0.032
03_02_0484 + 8805053-8805538 35 0.043
06_01_0814 - 6163155-6163591,6163729-6164038 34 0.074
05_06_0277 + 26885621-26886064,26886148-26886317,26887038-268879... 33 0.17
02_05_0811 + 31939414-31939660,31939766-31940181 33 0.17
03_02_0478 + 8775892-8776377 33 0.23
09_04_0075 - 14340458-14340551,14340643-14340814,14340895-143410... 32 0.30
06_01_1017 - 7951985-7952425 32 0.40
05_07_0326 + 29274287-29274428,29274577-29275379 31 0.52
04_03_0461 - 16165126-16165419,16165947-16166195,16168510-161686... 30 1.2
01_01_0228 + 1940149-1940649 30 1.6
08_01_0838 - 8185083-8185910 29 2.1
01_06_1448 - 37434159-37434242,37434875-37434968,37435077-374352... 29 2.1
07_01_0383 - 2856777-2858042,2858238-2858270,2858607-2858742,286... 29 2.8
05_03_0323 - 12424243-12424776 29 2.8
02_01_0222 + 1450233-1450766 29 2.8
07_03_0316 + 16684100-16684339,16684425-16685132,16685241-166859... 29 3.7
03_04_0090 + 17228253-17228403,17229062-17229129,17229238-172309... 29 3.7
02_04_0468 - 23172561-23174201 29 3.7
03_04_0062 + 16965323-16966024 28 4.9
02_05_1160 + 34580680-34582659 28 6.5
09_03_0205 - 13483981-13484291,13484402-13484531,13484742-13484939 27 8.5
06_02_0024 - 10714741-10716241,10716774-10717840 27 8.5
02_04_0053 - 19276891-19277079,19277947-19278073,19278320-192784... 27 8.5
>01_01_0227 + 1933247-1933699
Length = 150
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/63 (39%), Positives = 34/63 (53%)
Frame = +1
Query: 406 VEGKHEEKQDEHGFISRQFTRRYILPTGYEVNDLVSTLSSDGVLTVTAPKRPPPNAGERI 585
V+GK++E+ S +F RR+ LP G V D VS +GVLTVT PK +
Sbjct: 87 VDGKNDERWHHVERSSGKFQRRFRLPRGARV-DQVSASMDNGVLTVTVPKEETKKPQLKA 145
Query: 586 VPI 594
+PI
Sbjct: 146 IPI 148
>01_01_0599 - 4448290-4448790
Length = 166
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Frame = +1
Query: 412 GKHEEKQDEHGFISRQ-----FTRRYILPTGYEVNDLVSTLSSDGVLTVTAPKRPPP 567
G EEK++ ++ + F R+++LP +V D +S + DGVLTVT K PPP
Sbjct: 98 GGEEEKEESCKYLRMERRMGKFMRKFVLPDNADV-DKISAVCQDGVLTVTVEKLPPP 153
>02_05_0972 + 33198035-33198277,33198366-33198641
Length = 172
Score = 39.9 bits (89), Expect = 0.001
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Frame = +1
Query: 316 LTKEKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFIS-------RQFTRRY 474
L+K +V L+ + + +K+SN + K EE++ E +I R F R++
Sbjct: 75 LSKSDIQVTLEEDRV----LVMKSSNGAGNGKRKREEEEGECKYIRLERRASPRAFARKF 130
Query: 475 ILPTGYEVNDLVSTLSSDGVLTVTAPKRPPPNAGERIVPI 594
LP + +S +GVLTVT KRPPP + V +
Sbjct: 131 RLPEDADTGG-ISARCENGVLTVTVKKRPPPEKKTKSVQV 169
>01_01_0229 - 1943473-1943922
Length = 149
Score = 37.1 bits (82), Expect = 0.011
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Frame = +1
Query: 319 TKEKFEVILDVQQFTPDEITVKASN-NTVVVEGKH----EEKQDEHGFISR---QFTRRY 474
T E D+ +E+ V+ N +V+ G+ E+K D+ + R QF RR+
Sbjct: 49 TPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRF 108
Query: 475 ILPTGYEVNDLVSTLSSDGVLTVTAPK 555
LP +V D V +GVLTVT PK
Sbjct: 109 RLPENAKV-DQVKASMENGVLTVTVPK 134
>01_01_0231 + 1951047-1951499
Length = 150
Score = 36.3 bits (80), Expect = 0.018
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Frame = +1
Query: 319 TKEKFEVILDVQQFTPDEITVKASN-NTVVVEGKH----EEKQDEHGFISR---QFTRRY 474
T E D+ +E+ V+ N +V+ G+ E+K D+ + R QF RR+
Sbjct: 50 TPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRF 109
Query: 475 ILPTGYEVNDLVSTLSSDGVLTVTAPK 555
LP +V D V +GVLTVT PK
Sbjct: 110 RLPENAKV-DQVKAGMENGVLTVTVPK 135
>01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457
Length = 438
Score = 36.3 bits (80), Expect = 0.018
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Frame = +1
Query: 319 TKEKFEVILDVQQFTPDEITVKASN-NTVVVEGKH----EEKQDEHGFISR---QFTRRY 474
T E D+ +E+ V+ N +V+ G+ E+K D+ + R QF RR+
Sbjct: 50 TPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRF 109
Query: 475 ILPTGYEVNDLVSTLSSDGVLTVTAPK 555
LP +V+ + + L + GVLTVT PK
Sbjct: 110 RLPENAKVDQVKAGLEN-GVLTVTVPK 135
>11_02_0041 - 7669692-7670312
Length = 206
Score = 35.5 bits (78), Expect = 0.032
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +1
Query: 457 QFTRRYILPTGYEVNDLVSTLSSDGVLTVTAPKRPPPNAGE-RIVPI 594
+F RR+ +P G +V + + L DGVLTVT PK P E R+V I
Sbjct: 141 RFWRRFRMPPGADVGRVAARLD-DGVLTVTVPKVPGHRGREPRVVAI 186
>03_02_0485 - 8808139-8808618
Length = 159
Score = 35.5 bits (78), Expect = 0.032
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Frame = +1
Query: 346 DVQQFTPDEITVKASNNTVV-VEGKH----EEKQDEHGFISR---QFTRRYILPTGYEVN 501
DV +E+ V+ + ++ + G+ EEK D+ + R +F RR+ LP +
Sbjct: 68 DVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPE 127
Query: 502 DLVSTLSSDGVLTVTAPKRPPPNAGERIVPI 594
+ +++ + GVLTVT PK P + + I
Sbjct: 128 QIKASMEN-GVLTVTVPKEEPKKPDVKSIQI 157
>03_02_0483 - 8804021-8804485
Length = 154
Score = 35.5 bits (78), Expect = 0.032
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Frame = +1
Query: 346 DVQQFTPDEITVKASNNTVV-VEGKH----EEKQDEHGFISR---QFTRRYILPTGYEVN 501
DV +E+ V+ + V+ + G+ EEK D+ + R +F RR+ LP +
Sbjct: 63 DVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPE 122
Query: 502 DLVSTLSSDGVLTVTAPKRPPPNAGERIVPI 594
+ +++ + GVLTVT PK P + + I
Sbjct: 123 QIKASMEN-GVLTVTVPKEEPKKPDVKSIQI 152
>02_02_0077 - 6586638-6587165
Length = 175
Score = 35.5 bits (78), Expect = 0.032
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +1
Query: 457 QFTRRYILPTGYEVNDLVSTLSSDGVLTVTAPKRPPPNAGE-RIVPI 594
+F RR+ LP ++ D V DGVLTVT K+PPP + R+V +
Sbjct: 117 KFMRRFPLPESADL-DGVRAEYKDGVLTVTVDKKPPPEPKKPRVVEV 162
>03_02_0484 + 8805053-8805538
Length = 161
Score = 35.1 bits (77), Expect = 0.043
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Frame = +1
Query: 346 DVQQFTPDEITVKASNNTVV-VEGKH----EEKQDEHGFISR---QFTRRYILPTGYEVN 501
DV +E+ V+ + V+ + G+ EEK D+ + R +F RR+ LP +
Sbjct: 70 DVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPE 129
Query: 502 DLVSTLSSDGVLTVTAPKRPP 564
+ +++ + GVLTVT PK P
Sbjct: 130 QIKASMEN-GVLTVTVPKEEP 149
>06_01_0814 - 6163155-6163591,6163729-6164038
Length = 248
Score = 34.3 bits (75), Expect = 0.074
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +1
Query: 367 DEITVKASNNTVVVEGKHE-EKQDEHGFISRQFTRRYILPTGYEVNDLVSTLSSDGVLTV 543
+ + V A N++V++G+ E + +D+ ++TRR LP D + +GVL V
Sbjct: 170 EHVKVWAEQNSLVIKGEGEKDPEDDADAAPPRYTRRIELPADAFKMDKIKAEMKNGVLRV 229
Query: 544 TAPK 555
PK
Sbjct: 230 AVPK 233
>05_06_0277 +
26885621-26886064,26886148-26886317,26887038-26887941,
26888544-26888575,26888862-26888928,26889116-26889173,
26889329-26889421,26890366-26890480,26890847-26890894,
26891012-26891057,26891161-26891231,26891865-26891870,
26891991-26892038,26892439-26892488,26892892-26893154
Length = 804
Score = 33.1 bits (72), Expect = 0.17
Identities = 24/82 (29%), Positives = 40/82 (48%)
Frame = +3
Query: 318 DEREI*GYFRRSAIHSRRDHGQGVEQHGCRRRQARGETGRARLHFPSVHPPVHPADRIRG 497
D+R++ +R+ RRD + + R ++ GE+GR+ SV P H R RG
Sbjct: 435 DDRKVNSREQRADHDDRRDSAR---ERRADRDESNGESGRSSRRGRSVSPEEH---RHRG 488
Query: 498 QRPGQHVVFRRRAHRHGAETTS 563
+R + R+ HG +T+S
Sbjct: 489 RRESRQSPRSSRSAAHGEDTSS 510
>02_05_0811 + 31939414-31939660,31939766-31940181
Length = 220
Score = 33.1 bits (72), Expect = 0.17
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Frame = +1
Query: 274 RASLARQESSSTINLTKEKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEK--QDEHGF 447
RA A ++E + +D+ + + V A N++V++G+ E++ +DE
Sbjct: 111 RAGAATLRRGWNAKESEEALHLRVDMPGLGKEHVKVWAEQNSLVIKGEGEKEAGEDEGAA 170
Query: 448 ISRQFTRRYILPTGYEVNDLVSTLSSDGVLTVTAPK 555
+R R + P Y ++ + + + + GVL V PK
Sbjct: 171 PARYSGRIELAPEVYRMDQIKAEMKN-GVLKVVVPK 205
>03_02_0478 + 8775892-8776377
Length = 161
Score = 32.7 bits (71), Expect = 0.23
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Frame = +1
Query: 346 DVQQFTPDEITVKASNNTVV-VEGKH----EEKQDEHGFISR---QFTRRYILPTGYEVN 501
DV +E+ V+ + ++ + G+ EEK D+ + R +F RR+ LP +
Sbjct: 70 DVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRFRLPDNAKPE 129
Query: 502 DLVSTLSSDGVLTVTAPK 555
+ +++ + GVLTVT PK
Sbjct: 130 QIKASMEN-GVLTVTVPK 146
>09_04_0075 -
14340458-14340551,14340643-14340814,14340895-14341066,
14341617-14341811,14341886-14342053,14342150-14342335,
14342797-14342881,14342896-14343206,14344222-14344569
Length = 576
Score = 32.3 bits (70), Expect = 0.30
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 418 HEEKQDEHGFISRQFTRRYILPTGYEVND 504
H + H FI+ Q + Y LP GYE+ND
Sbjct: 157 HSLEAGHHVFINLQTEKAYCLPDGYEIND 185
>06_01_1017 - 7951985-7952425
Length = 146
Score = 31.9 bits (69), Expect = 0.40
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Frame = +1
Query: 373 ITVKASNNTVVVEGKHEEKQDEHGFISR----QFTRRYILPTGYEVNDLVSTLSSDGVLT 540
+TV+ + E + E ++D ++ +F R LP V + +++ + GVLT
Sbjct: 65 LTVRGAAPHAAAEKEREREKDVVWHVAERGRPEFAREVALPAEVRVEQIRASVDN-GVLT 123
Query: 541 VTAPKRPPPNAGERIVPI 594
V PK P P A R PI
Sbjct: 124 VVVPKEPAP-ARPRTRPI 140
>05_07_0326 + 29274287-29274428,29274577-29275379
Length = 314
Score = 31.5 bits (68), Expect = 0.52
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +1
Query: 400 VVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVNDLVSTLSSDGVLTVTAPKRPPPNA 573
+ V G+ +H + +F + + LP+ ++D+ + VLT+T PKRP P +
Sbjct: 64 LTVRGQRPAAGSKH---NTRFHKVFQLPSNANIDDITGRFEAS-VLTITVPKRPAPTS 117
>04_03_0461 -
16165126-16165419,16165947-16166195,16168510-16168645,
16171251-16171469,16172738-16173116,16173660-16173918,
16176052-16176315
Length = 599
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +3
Query: 444 LHFPSVHPPVHPADRIRGQRPGQHVVFRRR--AHRHGAETTST 566
+H + HPP+ P + V FRR+ AHRH A+ ST
Sbjct: 16 VHARTGHPPIWPPVGLLSAGAPAKVSFRRQSNAHRHAAQVVST 58
>01_01_0228 + 1940149-1940649
Length = 166
Score = 29.9 bits (64), Expect = 1.6
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Frame = +1
Query: 367 DEITVKASN-NTVVVEGKHEEKQDEHGFISRQFTR-------RYILPTGYEVNDLVSTLS 522
+E+ V+ N +V+ G+ +++E G S R R+ LP V DLV
Sbjct: 65 EEVRVEVDEGNVLVITGERSVRREEKGQRSHHIERSCATFFGRFHLPDDAVV-DLVRASM 123
Query: 523 SDGVLTVTAPK 555
G+LTVT PK
Sbjct: 124 DGGMLTVTVPK 134
>08_01_0838 - 8185083-8185910
Length = 275
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 406 VEGKHEEKQDEHGFISRQFTRRYILPTGYE 495
++ EE+ EH + R+FT +YI+ +GY+
Sbjct: 194 IKKAEEEESLEHNELWREFTDKYIIASGYD 223
>01_06_1448 -
37434159-37434242,37434875-37434968,37435077-37435250,
37435536-37435627,37435947-37436056,37437274-37437349,
37437445-37437537,37437617-37437817
Length = 307
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 447 HFPSVHPPVHPADRIRGQRPGQHVVFRRRAHRHG 548
HF S++P V A +RP + VV + H HG
Sbjct: 91 HFTSLYPQVSEATVTIAERPWERVVVDGKPHSHG 124
>07_01_0383 -
2856777-2858042,2858238-2858270,2858607-2858742,
2860778-2860890
Length = 515
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +1
Query: 400 VVVEGKHEEKQDE--HGFISRQFTRRYILPTGYEVNDLVSTLSSDGVLTV 543
+++E ++K+D+ GF+ R R L G +V+ LV + DG+ V
Sbjct: 50 LLLENSSKQKRDQGIKGFLYRSLEERSFLSAGIQVDGLVLGMFMDGIAGV 99
>05_03_0323 - 12424243-12424776
Length = 177
Score = 29.1 bits (62), Expect = 2.8
Identities = 25/74 (33%), Positives = 31/74 (41%)
Frame = +3
Query: 318 DEREI*GYFRRSAIHSRRDHGQGVEQHGCRRRQARGETGRARLHFPSVHPPVHPADRIRG 497
++RE +A H+ R HG+G G R RG GR H H AD +
Sbjct: 109 EQREAQQRHNIAAAHAMRPHGRGRGNGGNGR--GRGSAGRG--HAIGAHEDDVDADFVLD 164
Query: 498 QRPGQHVVFRRRAH 539
Q G RRRAH
Sbjct: 165 QDDGHQ---RRRAH 175
>02_01_0222 + 1450233-1450766
Length = 177
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +1
Query: 451 SRQFTRRYILPTGYEVNDLVSTLSSDGVLTVTAPKRPPPNAGERIVPI 594
S +F R LP + + + L + GVLT+T PK RI+PI
Sbjct: 129 SERFVRTVRLPPNANTDGVHAALDN-GVLTITIPKDNDRKPHARIIPI 175
>07_03_0316 +
16684100-16684339,16684425-16685132,16685241-16685939,
16685992-16686053,16686096-16686368,16686622-16686873,
16686954-16687064,16687152-16687212,16687312-16687404,
16687482-16687667
Length = 894
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +3
Query: 186 HGSEEGRSVILHQFIPLDLALQKFILQTLEGELSQAGIFFDDQFDEREI*G--YFRRSAI 359
HGSE R + H D +KF++ +G+ +A + DD E+ G YF
Sbjct: 577 HGSEVPRVLRSHDSKSKDENKEKFMVTVFKGDKERAKLRDDDPQKAAELAGPTYFTTHDC 636
Query: 360 HSRRDHGQGV 389
+ +HG+ +
Sbjct: 637 PEKYEHGKAL 646
>03_04_0090 +
17228253-17228403,17229062-17229129,17229238-17230902,
17231002-17231143,17231648-17232399
Length = 925
Score = 28.7 bits (61), Expect = 3.7
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = -2
Query: 341 ITSNFSFVKLIVEEDSCLAKLALQGLKYEFLKSEVEGNELMEDNRSSFFRPM 186
I S S ++ EEDS LA+ A+QG+K E+ S+ E ++ S F+ +
Sbjct: 846 IQSRSSMIRCSEEEDSRLAEDAMQGMK-EWKSSDSERQGIVLAIEKSIFKDL 896
>02_04_0468 - 23172561-23174201
Length = 546
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -2
Query: 566 GGGRFGAVTVSTPSEDNVLTRSLTSYPVGRMYR 468
GGG G +T + + ++VL + +YP G YR
Sbjct: 93 GGGSSGVITSAPANVEHVLRANFGNYPKGPYYR 125
>03_04_0062 + 16965323-16966024
Length = 233
Score = 28.3 bits (60), Expect = 4.9
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -3
Query: 181 SAGPVVWRGARYAPSHPTNRETSLV 107
+AGP W +Y P TN + S++
Sbjct: 14 AAGPTAWSSQKYRPGFATNAQRSII 38
>02_05_1160 + 34580680-34582659
Length = 659
Score = 27.9 bits (59), Expect = 6.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 202 PSSDPCRSAGPVVWRGARYAPSHP 131
P+ PC+ G +V + +RY P HP
Sbjct: 193 PNPGPCQGNGGMVVKISRYGPPHP 216
>09_03_0205 - 13483981-13484291,13484402-13484531,13484742-13484939
Length = 212
Score = 27.5 bits (58), Expect = 8.5
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = +3
Query: 345 RRSAIHSRRDHGQGVEQHGCRRRQARGETGRARLHFPSVHPPVHPADR 488
RR A+ S DH + GCRR + G R H P HP DR
Sbjct: 40 RRVALLSSVDHPAPTQLRGCRR--SNQHQGVLRQHDPGA--TAHPLDR 83
>06_02_0024 - 10714741-10716241,10716774-10717840
Length = 855
Score = 27.5 bits (58), Expect = 8.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 51 HEKSSARSQRTLNKKDVDSTNDVSR 125
H+KS R N+ +V +TND+ R
Sbjct: 649 HQKSQGTQNRRTNEAEVPNTNDIKR 673
>02_04_0053 -
19276891-19277079,19277947-19278073,19278320-19278435,
19279089-19279382
Length = 241
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 487 GYEVNDLVSTLSSDGVLTVTAPKRPPPNA 573
G + L+ TL++DG P PPPNA
Sbjct: 58 GAALGGLMGTLTADGGSPFPTPPPPPPNA 86
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,150,753
Number of Sequences: 37544
Number of extensions: 333165
Number of successful extensions: 1349
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1346
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1411925004
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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