Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0577
(594 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g12030.1 68418.m01406 17.7 kDa class II heat shock protein 17... 43 2e-04
At5g12020.1 68418.m01405 17.6 kDa class II heat shock protein (... 42 2e-04
At2g29500.1 68415.m03583 17.6 kDa class I small heat shock prote... 42 4e-04
At4g10250.1 68417.m01682 22.0 kDa ER small heat shock protein (H... 39 0.002
At5g51440.1 68418.m06377 23.5 kDa mitochondrial small heat shock... 38 0.007
At1g07400.1 68414.m00789 17.8 kDa class I heat shock protein (HS... 37 0.012
At1g53540.1 68414.m06074 17.6 kDa class I small heat shock prote... 36 0.015
At5g59720.1 68418.m07486 18.1 kDa class I heat shock protein (HS... 36 0.020
At4g25200.1 68417.m03627 23.6 kDa mitochondrial small heat shock... 36 0.027
At1g59860.1 68414.m06742 17.6 kDa class I heat shock protein (HS... 35 0.047
At2g02160.1 68415.m00152 zinc finger (CCCH-type) family protein ... 33 0.19
At1g63230.1 68414.m07147 pentatricopeptide (PPR) repeat-containi... 32 0.33
At2g15630.1 68415.m01790 pentatricopeptide (PPR) repeat-containi... 31 0.58
At2g41450.1 68415.m05121 GCN5-related N-acetyltransferase (GNAT)... 29 2.3
At1g24540.1 68414.m03089 cytochrome P450, putative similar to GB... 28 4.1
At5g49580.1 68418.m06136 DNAJ heat shock N-terminal domain-conta... 27 7.1
At4g21870.1 68417.m03163 26.5 kDa class P-related heat shock pro... 27 7.1
At5g60200.1 68418.m07546 Dof-type zinc finger domain-containing ... 27 9.4
At5g37670.1 68418.m04537 15.7 kDa class I-related small heat sho... 27 9.4
At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to uclacy... 27 9.4
At2g34180.1 68415.m04183 CBL-interacting protein kinase 13 (CIPK... 27 9.4
At1g73770.1 68414.m08541 hypothetical protein 27 9.4
At1g09690.1 68414.m01088 60S ribosomal protein L21 (RPL21C) Simi... 27 9.4
At1g09590.1 68414.m01076 60S ribosomal protein L21 (RPL21A) Simi... 27 9.4
At1g09575.1 68414.m01074 expressed protein contains Pfam domain,... 27 9.4
>At5g12030.1 68418.m01406 17.7 kDa class II heat shock protein 17.6A
(HSP17.7-CII) identical to heat shock protein 17.6A
GI:3256075 from [Arabidopsis thaliana]
Length = 156
Score = 42.7 bits (96), Expect = 2e-04
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Frame = +1
Query: 343 LDVQQFTPDEITVKASN-NTVVVEGKHEEKQDEHG---FISRQ-----FTRRYILPTGYE 495
+D+ DEI V+ N N +VV GK + E+ F+ + F R++ LP +
Sbjct: 61 VDMPGIKGDEIQVQIENENVLVVSGKRQRDNKENEGVKFVRMERRMGKFMRKFQLPDNAD 120
Query: 496 VNDLVSTLSSDGVLTVTAPKRPPP 567
+ + +S +DGVL VT PK PPP
Sbjct: 121 L-EKISAACNDGVLKVTIPKLPPP 143
>At5g12020.1 68418.m01405 17.6 kDa class II heat shock protein
(HSP17.6-CII) identical to 17.6 kDa class II heat shock
protein SP:P29830 from [Arabidopsis thaliana]
Length = 155
Score = 42.3 bits (95), Expect = 2e-04
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Frame = +1
Query: 331 FEVILDVQQFTPDEITVKASNNTVVV---EGKHEEKQDEHGFISR------QFTRRYILP 483
+ ++D+ DEI V+ N+ V+V E + E K++E R +F R++ LP
Sbjct: 56 YAFVVDMPGIKGDEIKVQVENDNVLVVSGERQRENKENEGVKYVRMERRMGKFMRKFQLP 115
Query: 484 TGYEVNDLVSTLSSDGVLTVTAPKRPPP 567
++ D +S + DGVL VT K PPP
Sbjct: 116 ENADL-DKISAVCHDGVLKVTVQKLPPP 142
>At2g29500.1 68415.m03583 17.6 kDa class I small heat shock protein
(HSP17.6B-CI) contains Pfam PF00011: Hsp20/alpha
crystallin family; identified in Scharf, K-D., et al,
Cell Stress & Chaperones (2001) 6: 225-237.
Length = 153
Score = 41.5 bits (93), Expect = 4e-04
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 14/125 (11%)
Frame = +1
Query: 262 FRPWRASLARQESSSTINL------TKEKFEVILDVQQFTPDEITVKASNNTVV-VEG-K 417
F+ +S +E+S+ +N T E D+ +E+ V+ ++V+ + G +
Sbjct: 28 FKELTSSSLSRENSAIVNARVDWRETPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGER 87
Query: 418 HEEKQDEHGFISR------QFTRRYILPTGYEVNDLVSTLSSDGVLTVTAPKRPPPNAGE 579
H EK+D++ R QFTRR+ LP ++ D V +GVLTVT PK A
Sbjct: 88 HVEKEDKNDTWHRVERSSGQFTRRFRLPENVKM-DQVKAAMENGVLTVTVPKAETKKADV 146
Query: 580 RIVPI 594
+ + I
Sbjct: 147 KSIQI 151
>At4g10250.1 68417.m01682 22.0 kDa ER small heat shock protein
(HSP22.0-ER) identical to endomembrane-localized small
heat shock protein GI:511795 from [Arabidopsis thaliana]
Length = 195
Score = 39.1 bits (87), Expect = 0.002
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 9/101 (8%)
Frame = +1
Query: 319 TKEKFEVILDVQQFTPDEITVKASNNTVV-VEG----KHEEKQDEHGFISR---QFTRRY 474
T E E++LD+ DE+ ++ N V+ V G + E+K D+ + R +F R++
Sbjct: 78 TAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRVERSYGKFWRQF 137
Query: 475 ILPTGYEVNDLVSTLSSDGVLTVTAPKRPPPNA-GERIVPI 594
LP ++ + + L +GVLT+ K P G R+V I
Sbjct: 138 KLPDNVDMESVKAKL-ENGVLTINLTKLSPEKVKGPRVVNI 177
>At5g51440.1 68418.m06377 23.5 kDa mitochondrial small heat shock
protein (HSP23.5-M) similar to heat shock 22 kDa
protein, mitochondrial precursor SP:Q96331 from
[Arabidopsis thaliana]; identified in Scharf, K-D., et
al,Cell Stress & Chaperones (2001) 6: 225-237.
Length = 210
Score = 37.5 bits (83), Expect = 0.007
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Frame = +1
Query: 322 KEKFEVI---LDVQQFTPDEITVKASNNTVVV--EGKHEEKQDEHGFISRQFTRRYILPT 486
KEK + + +D+ + +++ + NT+V+ EG+ EE +D G R+FT R LP
Sbjct: 114 KEKDDALHLRIDMPGLSREDVKLALEQNTLVIRGEGETEEGEDVSGD-GRRFTSRIELPE 172
Query: 487 GYEVNDLVSTLSSDGVLTVTAPK 555
D + +GVL V PK
Sbjct: 173 KVYKTDEIKAEMKNGVLKVVIPK 195
>At1g07400.1 68414.m00789 17.8 kDa class I heat shock protein
(HSP17.8-CI) similar to 17.5 kDa class I heat shock
protein SP:P04793 from [Glycine max]; contains Pfam
PF00011: Hsp20/alpha crystallin family
Length = 157
Score = 36.7 bits (81), Expect = 0.012
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 8/78 (10%)
Frame = +1
Query: 346 DVQQFTPDEITVKASNNTVV-VEGKH----EEKQDEHGFISR---QFTRRYILPTGYEVN 501
D+ +E+ V+ +++V+ + G+ EEKQD + R QF+R++ LP ++
Sbjct: 64 DLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPENVKM- 122
Query: 502 DLVSTLSSDGVLTVTAPK 555
D V +GVLTVT PK
Sbjct: 123 DQVKASMENGVLTVTVPK 140
>At1g53540.1 68414.m06074 17.6 kDa class I small heat shock protein
(HSP17.6C-CI) (AA 1-156) identical to (17.6 kDa class I
heat shock protein (HSP 17.6) (AA 1-156)(SP:P13853)
(GI:4376161) (Arabidopsis thaliana) (Nucleic Acids Res.
17 (19), 7995 (1989))
Length = 157
Score = 36.3 bits (80), Expect = 0.015
Identities = 23/80 (28%), Positives = 46/80 (57%), Gaps = 8/80 (10%)
Frame = +1
Query: 346 DVQQFTPDEITVKASNNTVV-VEGK----HEEKQDEHGFISR---QFTRRYILPTGYEVN 501
D+ +E+ V+ + ++ + G+ +EEK D+ + R +FTRR+ LP ++
Sbjct: 66 DLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPENAKME 125
Query: 502 DLVSTLSSDGVLTVTAPKRP 561
++ +++ +GVL+VT PK P
Sbjct: 126 EIKASM-ENGVLSVTVPKVP 144
>At5g59720.1 68418.m07486 18.1 kDa class I heat shock protein
(HSP18.1-CI) identical to 18.2 kDa class I heat shock
protein (HSP 18.2) (SP:P19037)[Arabidopsis thaliana];
contains Pfam profile: PF00011 Hsp20/alpha crystallin
family
Length = 161
Score = 35.9 bits (79), Expect = 0.020
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Frame = +1
Query: 346 DVQQFTPDEITVKASNNTVV-VEGK----HEEKQDEHGFISR---QFTRRYILPTGYEVN 501
D+ +E+ V+ + V+ + G+ +EEK D+ + R +F RR+ LP ++
Sbjct: 68 DLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRLPENAKME 127
Query: 502 DLVSTLSSDGVLTVTAPKRP 561
++ +T+ + GVLTV PK P
Sbjct: 128 EVKATMEN-GVLTVVVPKAP 146
>At4g25200.1 68417.m03627 23.6 kDa mitochondrial small heat shock
protein (HSP23.6-M) contains Pfam profile PF00011:
Hsp20/alpha crystallin family
Length = 210
Score = 35.5 bits (78), Expect = 0.027
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Frame = +1
Query: 322 KEKFEVI---LDVQQFTPDEITVKASNNTVVV--EGKHEEKQDEHGFI-SRQFTRRYILP 483
KEK + + +D+ + +++ + +T+V+ EGK+EE E G +R+FT R LP
Sbjct: 112 KEKDDALYLRIDMPGLSREDVKLALEQDTLVIRGEGKNEEDGGEEGESGNRRFTSRIGLP 171
Query: 484 TGYEVNDLVSTLSSDGVLTVTAPK 555
D + +GVL V PK
Sbjct: 172 DKIYKIDEIKAEMKNGVLKVVIPK 195
>At1g59860.1 68414.m06742 17.6 kDa class I heat shock protein
(HSP17.6A-CI) similar to 17.5 kDa class I heat shock
protein SP:P04793 from [Glycine max]
Length = 155
Score = 34.7 bits (76), Expect = 0.047
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Frame = +1
Query: 346 DVQQFTPDEITVKASNNTVV-VEGKH----EEKQDEHGFISRQ---FTRRYILPTGYEVN 501
D+ +E+ V+ +++V+ + G+ EEKQD + R F+R++ LP ++
Sbjct: 62 DLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGGFSRKFRLPENVKM- 120
Query: 502 DLVSTLSSDGVLTVTAPK 555
D V +GVLTVT PK
Sbjct: 121 DQVKASMENGVLTVTVPK 138
>At2g02160.1 68415.m00152 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 669
Score = 32.7 bits (71), Expect = 0.19
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +1
Query: 280 SLARQESSSTINL-TKEKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISR 456
+++++E+ I L T+EK EV+ + + +E TV +V E +E +DE +
Sbjct: 552 TISKEEAGDEIKLITEEKTEVVSEPKAEVEEEGTVMEEEE-IVGEEVYEGNEDEQAYEGD 610
Query: 457 QFTRRYILPTGYE 495
+ Y GYE
Sbjct: 611 ELNGEYYYEEGYE 623
>At1g63230.1 68414.m07147 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 323
Score = 31.9 bits (69), Expect = 0.33
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +1
Query: 352 QQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVNDLV 510
+Q PD +T A N +V EGK E ++ +G RR I PT N ++
Sbjct: 140 RQINPDVVTFSALINALVKEGKVSEAEEIYG----DMLRRGIFPTTITYNSMI 188
>At2g15630.1 68415.m01790 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 627
Score = 31.1 bits (67), Expect = 0.58
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +1
Query: 343 LDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVNDLVSTLS 522
+D+ PD++T + EGK EE ++ G + RR I P N L+S S
Sbjct: 493 MDMMSINPDDVTYNCLMRGLCGEGKFEEARELMG----EMKRRGIKPDHISYNTLISGYS 548
Query: 523 SDG 531
G
Sbjct: 549 KKG 551
>At2g41450.1 68415.m05121 GCN5-related N-acetyltransferase (GNAT)
family protein low similarity to Swift [Xenopus laevis]
GI:14164561; contains Pfam profiles PF00583:
acetyltransferase, GNAT family, PF00533: BRCA1 C
Terminus (BRCT) domain
Length = 991
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 192 SEEGRSVILHQFIPLDLALQKFILQTLEGELSQAGIFFDDQF 317
S R +L F+PL LA F+LQ G +FDD +
Sbjct: 580 SSYSRKFLLITFLPLSLACLAFLLQWRSGVNDSVTQWFDDNY 621
>At1g24540.1 68414.m03089 cytochrome P450, putative similar to
GB:AAB87111, similar to ESTs dbj|D41610, gb|T20562 and
emb|Z26058
Length = 522
Score = 28.3 bits (60), Expect = 4.1
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -2
Query: 563 GGRFGAVTVSTPSEDNVLTRSLTSYPVGRMYR 468
GG +G +T + +++L + +YP G YR
Sbjct: 85 GGAYGIMTADPANVEHILKTNFKNYPKGAFYR 116
>At5g49580.1 68418.m06136 DNAJ heat shock N-terminal
domain-containing protein contains similarity to S-locus
protein 5 GI:6069485 from [Brassica rapa]; contains Pfam
profile PF00226 DnaJ domain
Length = 695
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +3
Query: 303 FDDQFDEREI*GYFRRSAIHSRRD-HGQGVEQHGCRRRQARGE 428
+DD+ E+ YFRR S++D G G G + GE
Sbjct: 471 YDDELKREELLNYFRRFQNSSQKDTRGHGFSGSGFGSSEGEGE 513
>At4g21870.1 68417.m03163 26.5 kDa class P-related heat shock
protein (HSP26.5-P) contains Pfam profile: PF00011
Hsp20/alpha crystallin family: identified in Scharf,
K-D., et al,Cell Stress & Chaperones (2001) 6: 225-237.
Length = 134
Score = 27.5 bits (58), Expect = 7.1
Identities = 25/110 (22%), Positives = 44/110 (40%), Gaps = 6/110 (5%)
Frame = +1
Query: 247 FRNSYFRPWRASLARQ------ESSSTINLTKEKFEVILDVQQFTPDEITVKASNNTVVV 408
F+ PW LA Q E+ + + + +D+ +EI V+ ++ ++
Sbjct: 3 FQTIQVMPWEYVLASQSLNNYQENHVRWSQSPDSHTFSVDLPGLRKEEIKVEIEDSIYLI 62
Query: 409 EGKHEEKQDEHGFISRQFTRRYILPTGYEVNDLVSTLSSDGVLTVTAPKR 558
+ F R++ LP ++ +S DGVLTV PKR
Sbjct: 63 IRTEATPMSPPDQPLKTFKRKFRLPESIDMIG-ISAGYEDGVLTVIVPKR 111
>At5g60200.1 68418.m07546 Dof-type zinc finger domain-containing
protein similar to dof6 zinc finger protein GI:5689615
from [Arabidopsis thaliana]
Length = 257
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 464 PAGTSCRPDTRSTTWSARCLPTACSPS 544
P G CR + RST+ +AR L T P+
Sbjct: 99 PVGGGCRKNKRSTSSAARSLRTTPEPA 125
>At5g37670.1 68418.m04537 15.7 kDa class I-related small heat shock
protein-like (HSP15.7-CI) contains Pfam profile: PF00011
Hsp20/alpha crystallin family; identified in Scharf,
K-D., et al,Cell Stress & Chaperones (2001) 6: 225-237.
Length = 137
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +1
Query: 457 QFTRRYILPTGYEVNDLVSTLSSDGVLTVTAPK 555
+F RR LP +V D V +GVLTV PK
Sbjct: 88 EFLRRIELPENVKV-DQVKAYVENGVLTVVVPK 119
>At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to
uclacyanin 3 GI:3395770 from [Arabidopsis thaliana];
contains Pfam profile PF02298: Plastocyanin-like domain;
identical to cDNA uclacyanin 3 (UCC3)GI:3395769
Length = 222
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +2
Query: 437 STASFPVSSPAGTSCRPDTRSTTWSARCLPTACSPS 544
ST S P S+P+ S P T ST S P+ SPS
Sbjct: 126 STPSSPPSTPSTPSSPPSTPSTPSSPPSPPSPPSPS 161
>At2g34180.1 68415.m04183 CBL-interacting protein kinase 13 (CIPK13)
identical to CBL-interacting protein kinase 13
[Arabidopsis thaliana] gi|13249125|gb|AAK16688
Length = 502
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -1
Query: 150 DTLPVIPPIAKHHWYYRHLFYLKFVV 73
DT IP I KH W+ + ++KF +
Sbjct: 297 DTRITIPEIMKHRWFKKGFKHVKFYI 322
>At1g73770.1 68414.m08541 hypothetical protein
Length = 191
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +1
Query: 406 VEGKHEEKQDEHGFISRQFTRRYILPTGYEVNDLVSTLSSDG 531
+ GKH++ DE R+Y + ++V+D+ S + SDG
Sbjct: 97 LSGKHDDSDDE----VMDVVRKYPVNDAHKVDDIDSDIESDG 134
>At1g09690.1 68414.m01088 60S ribosomal protein L21 (RPL21C) Similar
to ribosomal protein L21 (gb|L38826). ESTs
gb|AA395597,gb|ATTS5197 come from this gene
Length = 164
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +1
Query: 367 DEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYE-VNDL 507
DE+ A N + K + K + GF+ T + P Y+ VNDL
Sbjct: 113 DELKAAAKANGETISTKRQPKGPKPGFMVEGMTLETVTPIPYDVVNDL 160
>At1g09590.1 68414.m01076 60S ribosomal protein L21 (RPL21A) Similar
to L21 family of ribosomal protein; amino acid sequence
is identical to F21M12.8
Length = 164
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +1
Query: 367 DEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYE-VNDL 507
DE+ A N + K + K + GF+ T + P Y+ VNDL
Sbjct: 113 DELKAAAKANGETISTKRQPKGPKPGFMVEGMTLETVTPIPYDVVNDL 160
>At1g09575.1 68414.m01074 expressed protein contains Pfam domain,
PF04678: Protein of unknown function, DUF607
Length = 292
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -2
Query: 563 GGRFGAVTVSTPSED-NVLTRSLTSYPVGRMYRRVN*REMK 444
GG VTV TPSED + +T ++ R VN +MK
Sbjct: 28 GGLRSCVTVKTPSEDEEEKKKEITIAEAKKLMRLVNVEDMK 68
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,197,121
Number of Sequences: 28952
Number of extensions: 237830
Number of successful extensions: 805
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 802
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1180950720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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