Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0576
         (697 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY063776-1|AAL59658.1|  224|Anopheles gambiae glutathione S-tran...    26   1.3  
AF316635-1|AAG45163.1|  224|Anopheles gambiae glutathione S-tran...    26   1.3  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    24   4.0  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   9.2  

>AY063776-1|AAL59658.1|  224|Anopheles gambiae glutathione
           S-transferase E1 protein.
          Length = 224

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +3

Query: 399 SCYSEISHPTGTLTGSSRTDYPREHKWLI*VQQL 500
           SC S ++   G +    R+++PR H W+  ++QL
Sbjct: 164 SCISSVASMVGFIP-MERSEFPRVHGWMERLKQL 196


>AF316635-1|AAG45163.1|  224|Anopheles gambiae glutathione
           S-transferase E1 protein.
          Length = 224

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +3

Query: 399 SCYSEISHPTGTLTGSSRTDYPREHKWLI*VQQL 500
           SC S ++   G +    R+++PR H W+  ++QL
Sbjct: 164 SCISSVASMVGFIP-MERSEFPRVHGWIERMKQL 196


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = +3

Query: 3   QEFGTRASFNENSNRYYEESDSFNENSNRLVQLLLGDN 116
           Q FG + +FN + ++     DSF ++   + Q+L G++
Sbjct: 632 QVFGGKFNFNSSVDKPRSNFDSFVQSLLTVFQILTGED 669


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +3

Query: 351 SSSEKLAIAGKLPLKPS 401
           S+S K  +AG LPL PS
Sbjct: 917 SASPKATVAGGLPLLPS 933


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 705,857
Number of Sequences: 2352
Number of extensions: 13879
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)