Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0575
(401 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8; Euteleostomi... 201 4e-51
UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93; Eukaryo... 201 4e-51
UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82; Eukaryo... 189 2e-47
UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21; Eukaryo... 147 8e-35
UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4; Eukaryot... 120 1e-26
UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19; Eukaryo... 120 1e-26
UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN full... 119 2e-26
UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma j... 108 5e-23
UniRef50_UPI000049933B Cluster: conserved hypothetical protein; ... 86 2e-16
UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whol... 85 5e-16
UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces ... 72 5e-12
UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;... 70 2e-11
UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillard... 62 4e-09
UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole gen... 61 7e-09
UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitoz... 50 2e-05
UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamb... 48 9e-05
UniRef50_A5UZX2 Cluster: Putative uncharacterized protein precur... 34 1.2
UniRef50_A5ASW3 Cluster: Putative uncharacterized protein; n=1; ... 34 1.2
UniRef50_Q9VL72 Cluster: CG5899-PA, isoform A; n=5; Diptera|Rep:... 34 1.2
UniRef50_UPI0000F2B19F Cluster: PREDICTED: hypothetical protein;... 33 2.1
UniRef50_Q8TN82 Cluster: Predicted protein; n=1; Methanosarcina ... 33 2.1
UniRef50_Q89D60 Cluster: Blr7583 protein; n=1; Bradyrhizobium ja... 33 2.8
UniRef50_A5E7M6 Cluster: Putative uncharacterized protein; n=1; ... 33 2.8
UniRef50_Q962J8 Cluster: PV1H14180_P; n=2; Plasmodium vivax|Rep:... 32 3.7
UniRef50_A0L8H8 Cluster: DNA repair protein RecN; n=2; cellular ... 32 4.9
UniRef50_Q751B7 Cluster: AGL211Cp; n=1; Eremothecium gossypii|Re... 32 4.9
UniRef50_Q92347 Cluster: Pumilio domain-containing protein C6G9.... 31 6.4
UniRef50_A2FD62 Cluster: Putative uncharacterized protein; n=1; ... 31 8.5
>UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8;
Euteleostomi|Rep: Ribosomal protein S8 - Homo sapiens
(Human)
Length = 188
Score = 201 bits (491), Expect = 4e-51
Identities = 91/126 (72%), Positives = 108/126 (85%)
Frame = -3
Query: 399 YNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRS 220
YNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS
Sbjct: 63 YNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRS 122
Query: 219 QKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRRD 40
+K +KY R++ AK+ LEEQF G+LLAC+ASRPGQCGRADGY+LEGKELEFYLR+
Sbjct: 123 KKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKI 182
Query: 39 QV*EGE 22
+ +G+
Sbjct: 183 KARKGK 188
>UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93;
Eukaryota|Rep: 40S ribosomal protein S8 - Homo sapiens
(Human)
Length = 208
Score = 201 bits (491), Expect = 4e-51
Identities = 91/126 (72%), Positives = 108/126 (85%)
Frame = -3
Query: 399 YNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRS 220
YNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS
Sbjct: 83 YNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRS 142
Query: 219 QKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRRD 40
+K +KY R++ AK+ LEEQF G+LLAC+ASRPGQCGRADGY+LEGKELEFYLR+
Sbjct: 143 KKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKI 202
Query: 39 QV*EGE 22
+ +G+
Sbjct: 203 KARKGK 208
>UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82;
Eukaryota|Rep: 40S ribosomal protein S8 - Drosophila
melanogaster (Fruit fly)
Length = 208
Score = 189 bits (461), Expect = 2e-47
Identities = 85/121 (70%), Positives = 104/121 (85%), Gaps = 2/121 (1%)
Frame = -3
Query: 399 YNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEA--IINKK 226
YNASNNELVRTKTLVKN+IVV+DATPFRQWYE+HY LPLGRK+ K + E+ ++ KK
Sbjct: 83 YNASNNELVRTKTLVKNSIVVIDATPFRQWYEAHYVLPLGRKRNPKHAQKEDENDVLTKK 142
Query: 225 RSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLR 46
RS+K +KYL RQ+ KVE ALE+QF +GR+LAC++SRPGQCGR+DGYILEGKELEFYL+
Sbjct: 143 RSEKVMKKYLERQKYGKVEQALEDQFTSGRILACISSRPGQCGRSDGYILEGKELEFYLK 202
Query: 45 R 43
+
Sbjct: 203 K 203
>UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21;
Eukaryota|Rep: 40S ribosomal protein S8 - Zea mays
(Maize)
Length = 221
Score = 147 bits (356), Expect = 8e-35
Identities = 75/134 (55%), Positives = 95/134 (70%), Gaps = 8/134 (5%)
Frame = -3
Query: 399 YNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKK--------GAKLTEAEE 244
YNASNNELVRT+TLVK+AIV VDA PF+QWY +HY + +GRKK A+ E E
Sbjct: 84 YNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKTPAAKKDNAEGQEVEA 143
Query: 243 AIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQCGRADGYILEGKE 64
A K+S RK R+ ++ +EEQF +GRLLAC++SRPGQCGRADGYILEGKE
Sbjct: 144 AAEETKKSNHVTRKLEKRKEGRTLDPHIEEQFGSGRLLACISSRPGQCGRADGYILEGKE 203
Query: 63 LEFYLRRDQV*EGE 22
LEFY+++ Q +G+
Sbjct: 204 LEFYMKKLQRKKGK 217
>UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4;
Eukaryota|Rep: 40S ribosomal protein S8 - Theileria
parva
Length = 188
Score = 120 bits (289), Expect = 1e-26
Identities = 67/119 (56%), Positives = 81/119 (68%)
Frame = -3
Query: 399 YNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRS 220
YNAS+NELVRTKTLVKNAIV VD TPF+ W+++HY L LG K +E +A S
Sbjct: 83 YNASSNELVRTKTLVKNAIVTVDPTPFKLWFKTHYGLELG-----KSSEDPQA------S 131
Query: 219 QKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRR 43
+K A A V L +QF +GRLLAC++SRPGQCGR DGY+LEG+EL FY RR
Sbjct: 132 EKVA---------ALVPRTLLDQFSSGRLLACISSRPGQCGRCDGYVLEGEELNFYRRR 181
>UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19;
Eukaryota|Rep: 40S ribosomal protein S8 - Leishmania
major
Length = 220
Score = 120 bits (288), Expect = 1e-26
Identities = 67/132 (50%), Positives = 84/132 (63%), Gaps = 13/132 (9%)
Frame = -3
Query: 399 YNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGR-KKGAKLTEAEE------- 244
YNA++NELVRTKTLVKN IV VDA PF++WY HY + L KK K A E
Sbjct: 83 YNATSNELVRTKTLVKNCIVAVDAAPFKRWYAKHYGIDLDADKKSTKAAVAAEKKGRKSA 142
Query: 243 -AIINK----KRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQCGRADGYI 79
A +K K S K R++ R+R +VE A+ +Q GR+LA + SRPGQ GRADG +
Sbjct: 143 HAAADKYDVNKASPKLQREWTRRRRNHRVEKAIADQLREGRVLARITSRPGQSGRADGIL 202
Query: 78 LEGKELEFYLRR 43
LEG EL+FYL+R
Sbjct: 203 LEGAELQFYLKR 214
>UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence; n=9;
Deuterostomia|Rep: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence - Mus
musculus (Mouse)
Length = 152
Score = 119 bits (287), Expect = 2e-26
Identities = 53/67 (79%), Positives = 60/67 (89%)
Frame = -3
Query: 399 YNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRS 220
YNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS
Sbjct: 83 YNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRS 142
Query: 219 QKTARKY 199
+K +KY
Sbjct: 143 KKIQKKY 149
>UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03085 protein - Schistosoma
japonicum (Blood fluke)
Length = 120
Score = 108 bits (259), Expect = 5e-23
Identities = 57/113 (50%), Positives = 76/113 (67%), Gaps = 9/113 (7%)
Frame = -3
Query: 354 KNAIVVVDATPFRQWYESHYTLPLGR-----KKGAKLT--EAEEAIINKKRSQKTARKYL 196
K+AIV + PFRQW+E+ Y LG KKG +T EE + KKRS+ +K+
Sbjct: 1 KSAIVQIGGAPFRQWFEAPYLKELGPPKVVCKKGPSVTPENPEEDFLLKKRSKSALKKFE 60
Query: 195 ARQRL--AKVEGALEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRR 43
RQ L A VE +L+E+F TGRLLAC++S+PGQ GRADGY+ EGKELEF+ ++
Sbjct: 61 TRQALPQANVEESLKEEFVTGRLLACISSKPGQVGRADGYLFEGKELEFFSKK 113
>UniRef50_UPI000049933B Cluster: conserved hypothetical protein;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 237
Score = 86.2 bits (204), Expect = 2e-16
Identities = 56/149 (37%), Positives = 82/149 (55%), Gaps = 30/149 (20%)
Frame = -3
Query: 399 YNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEA-----EEAII 235
YNAS+N+ VRT TLVK AI+ +D PFR W+ Y + K E+ E+ ++
Sbjct: 83 YNASDNDFVRTNTLVKGAIIEIDPAPFRLWFLKFYGKDIASTDYYKSLESATFKTEKKVV 142
Query: 234 ------NKKRS---------------QKTARKYLARQ----RLAKVEGALEEQFHTGRLL 130
NK+++ KT +K A++ + K + AL E F +GR+L
Sbjct: 143 VPKEEENKEKTIAQQIAETQVALMNPSKTMQKKYAKKLEVLKNMKFDEALLEGFQSGRVL 202
Query: 129 ACVASRPGQCGRADGYILEGKELEFYLRR 43
AC++SRPGQ G +GYILEGKEL+FY ++
Sbjct: 203 ACISSRPGQTGSVEGYILEGKELDFYSKK 231
>UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whole
genome shotgun sequence; n=2; Coelomata|Rep: Chromosome
undetermined SCAF13783, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 149
Score = 85.0 bits (201), Expect = 5e-16
Identities = 42/86 (48%), Positives = 53/86 (61%)
Frame = -3
Query: 279 RKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQC 100
R+ + T EE ++NKKRS+KT +KY R AC+ASRPGQC
Sbjct: 64 RRAPSWYTPEEEEVLNKKRSKKTQKKYDERXXXXXXXXXXXXXXXXXXXXACIASRPGQC 123
Query: 99 GRADGYILEGKELEFYLRRDQV*EGE 22
GRADGYILEGKELEFYLR+ + +G+
Sbjct: 124 GRADGYILEGKELEFYLRKIKAKKGK 149
>UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces
capsulatus NAm1|Rep: Ribosomal protein S8 - Ajellomyces
capsulatus NAm1
Length = 141
Score = 71.7 bits (168), Expect = 5e-12
Identities = 40/79 (50%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = -3
Query: 279 RKKGAKLTEAEEAIINKKRSQKTARKYLAR-QRLAKVEGALEEQFHTGRLLACVASRPGQ 103
R + + E I K R +K AR KVE ALE+QF GRL A V+SRPGQ
Sbjct: 59 RLESGNFSWGSEGIARKVRVIVVEKKQAARFAAQGKVEPALEKQFEAGRLYAVVSSRPGQ 118
Query: 102 CGRADGYILEGKELEFYLR 46
GR DGYILEG+EL FY R
Sbjct: 119 SGRVDGYILEGEELAFYQR 137
>UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;
Zea mays|Rep: Putative 40S ribosomal protein S8 - Zea
mays (Maize)
Length = 245
Score = 69.7 bits (163), Expect = 2e-11
Identities = 30/52 (57%), Positives = 41/52 (78%)
Frame = -3
Query: 399 YNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEE 244
Y A+NNELVRT+TLVK+AIV VDA PF+QWY +HY + +GRKK + + ++
Sbjct: 181 YIATNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKVSVAKKDD 232
>UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillardia
theta|Rep: 40S ribosomal protein S8 - Guillardia theta
(Cryptomonas phi)
Length = 178
Score = 62.1 bits (144), Expect = 4e-09
Identities = 46/121 (38%), Positives = 64/121 (52%)
Frame = -3
Query: 399 YNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRS 220
+N S+NELVRT TL K +IV +D + TL K+ AE+ I NK
Sbjct: 83 FNESSNELVRTNTLTKGSIVYLDIAKTL----IYNTLIRNLNSNPKI--AEDTISNK--- 133
Query: 219 QKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRRD 40
L +Q +G++LA + SRPGQ GRADGYILEG+EL+++L++
Sbjct: 134 ------------------ILIDQILSGKILARICSRPGQSGRADGYILEGQELDYFLKKI 175
Query: 39 Q 37
Q
Sbjct: 176 Q 176
>UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_54, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 110
Score = 61.3 bits (142), Expect = 7e-09
Identities = 39/92 (42%), Positives = 54/92 (58%)
Frame = -3
Query: 381 ELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARK 202
ELVRT+TLVKNAI+ Q Y HY L +G KK A T ++ +++ RK
Sbjct: 31 ELVRTQTLVKNAII--------QRYLQHYGLDIGCKKKASTTPRKK----ERKGNHVVRK 78
Query: 201 YLARQRLAKVEGALEEQFHTGRLLACVASRPG 106
RQ+ K++ +EEQF +GRLLA ++S PG
Sbjct: 79 LEKRQQDHKLDPHIEEQFGSGRLLAAISSYPG 110
>UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitozoon
cuniculi|Rep: Ribosomal protein S8 - Encephalitozoon
cuniculi
Length = 173
Score = 50.0 bits (114), Expect = 2e-05
Identities = 21/41 (51%), Positives = 28/41 (68%)
Frame = -3
Query: 174 VEGALEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFY 52
V+ +L E F G L A + SRPGQ G A G++L+G EL+FY
Sbjct: 120 VDPSLHESFEKGHLYAIITSRPGQVGMAQGHVLQGDELKFY 160
Score = 37.5 bits (83), Expect = 0.098
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = -3
Query: 399 YNASNNELVRTKTLVKNAIVVVDATPFR 316
Y+ S+NELVRT TL K+++V + A PF+
Sbjct: 83 YHPSSNELVRTNTLTKSSVVKISAEPFK 110
>UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamblia
ATCC 50803|Rep: Ribosomal protein S8 - Giardia lamblia
ATCC 50803
Length = 174
Score = 47.6 bits (108), Expect = 9e-05
Identities = 21/38 (55%), Positives = 27/38 (71%)
Frame = -3
Query: 156 EQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRR 43
+Q +LA ++SRPGQ G ADGYILEG EL FY ++
Sbjct: 133 DQIRGDHILARISSRPGQVGTADGYILEGPELLFYQKK 170
Score = 41.5 bits (93), Expect = 0.006
Identities = 16/28 (57%), Positives = 23/28 (82%)
Frame = -3
Query: 399 YNASNNELVRTKTLVKNAIVVVDATPFR 316
YN+++NELVRT TLVK +V +D+ PF+
Sbjct: 92 YNSTSNELVRTNTLVKGCVVQIDSAPFK 119
>UniRef50_A5UZX2 Cluster: Putative uncharacterized protein
precursor; n=2; Roseiflexus|Rep: Putative
uncharacterized protein precursor - Roseiflexus sp. RS-1
Length = 953
Score = 33.9 bits (74), Expect = 1.2
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = -3
Query: 162 LEEQFHTGRL-LACVASRPGQCGRADGYILEGKELEFYLRRDQV 34
LE QF L + V + PGQ GR+D Y + G EL FYLR +V
Sbjct: 841 LEWQFPMAILEVRLVGAEPGQEGRSDDYQVSG-ELRFYLRGQEV 883
>UniRef50_A5ASW3 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 738
Score = 33.9 bits (74), Expect = 1.2
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = -3
Query: 279 RKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRP 109
+K+G K E I + RK RQ+ K++ +EEQF +GRLLA ++S P
Sbjct: 273 KKEGEKGDGPVEEI---NKGNHVVRKLEKRQQDHKLDPHIEEQFGSGRLLAAISSYP 326
>UniRef50_Q9VL72 Cluster: CG5899-PA, isoform A; n=5; Diptera|Rep:
CG5899-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 844
Score = 33.9 bits (74), Expect = 1.2
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = -3
Query: 393 ASNNELVRTKTLV-KNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRS 220
AS EL KTL K A+ ++D PF W + L R G L A+E +INK+ +
Sbjct: 194 ASLIELQSVKTLSEKKALAIIDVRPFSDWSDLRQKLESIRMSGDLLNYAQE-LINKQNT 251
>UniRef50_UPI0000F2B19F Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 33.1 bits (72), Expect = 2.1
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -3
Query: 258 TEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQF 148
T EE I+NKK S+K +KY ++ AK+ L E F
Sbjct: 105 TPEEEEILNKKHSKKIQKKYEEWKKKAKISLLLREHF 141
>UniRef50_Q8TN82 Cluster: Predicted protein; n=1; Methanosarcina
acetivorans|Rep: Predicted protein - Methanosarcina
acetivorans
Length = 90
Score = 33.1 bits (72), Expect = 2.1
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -3
Query: 309 YESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTA-RKYLARQRLAKVEGALEE 154
Y + +TL R + A EA E ++ K +K A K LA+ L K+EG LEE
Sbjct: 31 YRNIWTLNGSRNRSATSKEACEKLLAKNCLRKIACEKLLAKNCLRKIEGLLEE 83
>UniRef50_Q89D60 Cluster: Blr7583 protein; n=1; Bradyrhizobium
japonicum|Rep: Blr7583 protein - Bradyrhizobium
japonicum
Length = 261
Score = 32.7 bits (71), Expect = 2.8
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 345 IVVVDATPFRQWYESHYTLPLGRKK 271
++ +D PFR+W + TLPLG K
Sbjct: 22 VIAIDGDPFREWQRTSRTLPLGEVK 46
>UniRef50_A5E7M6 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 620
Score = 32.7 bits (71), Expect = 2.8
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = -3
Query: 330 ATPFRQWYESHYTLPLGRKKGAKLTEAE 247
ATPF Q + +HY L RKKG K+ E E
Sbjct: 374 ATPFYQTFLAHYIWQLKRKKGKKMKEDE 401
>UniRef50_Q962J8 Cluster: PV1H14180_P; n=2; Plasmodium vivax|Rep:
PV1H14180_P - Plasmodium vivax
Length = 1011
Score = 32.3 bits (70), Expect = 3.7
Identities = 12/36 (33%), Positives = 25/36 (69%)
Frame = -3
Query: 273 KGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEG 166
+G KL EAE+ ++ +++S+ A K L ++ + ++EG
Sbjct: 586 EGGKLMEAEKKLLEEEKSRVDAEKKLMQEEMTRIEG 621
>UniRef50_A0L8H8 Cluster: DNA repair protein RecN; n=2; cellular
organisms|Rep: DNA repair protein RecN - Magnetococcus
sp. (strain MC-1)
Length = 560
Score = 31.9 bits (69), Expect = 4.9
Identities = 20/65 (30%), Positives = 29/65 (44%)
Frame = -3
Query: 327 TPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQF 148
T +R WYESH L R+KG E + + +TA Y ++ ++E
Sbjct: 162 TLYRSWYESHKALEQLREKGRDAAERRAFLSFQLEELETAGVYPGEEQ--ELEHQRTRLA 219
Query: 147 HTGRL 133
H GRL
Sbjct: 220 HAGRL 224
>UniRef50_Q751B7 Cluster: AGL211Cp; n=1; Eremothecium gossypii|Rep:
AGL211Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 612
Score = 31.9 bits (69), Expect = 4.9
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = -3
Query: 321 FRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHT 142
F W +SH +PL R++ ++ E NK+R +K + L R + + ALE +
Sbjct: 512 FTNWEDSHIGVPLSREEVTEINTKEVEAANKER-EKAVEEELQEAR-ERQKQALEAKRGP 569
Query: 141 GRLL 130
G++L
Sbjct: 570 GKIL 573
>UniRef50_Q92347 Cluster: Pumilio domain-containing protein
C6G9.02c; n=1; Schizosaccharomyces pombe|Rep: Pumilio
domain-containing protein C6G9.02c - Schizosaccharomyces
pombe (Fission yeast)
Length = 655
Score = 31.5 bits (68), Expect = 6.4
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 69 CLLRCNHRRDHTDLGDSPRKPANALCGIALLE 164
CLLR H+RD + + RK N L G LLE
Sbjct: 440 CLLRSKHKRDKANPENKERKLVNNLLGAQLLE 471
>UniRef50_A2FD62 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 633
Score = 31.1 bits (67), Expect = 8.5
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3
Query: 291 LPLGRKKGAKLTEAEEAIINKKRSQKTARK 202
LPL K K T ++ I+N +RS+KT +K
Sbjct: 25 LPLNGKTAIKSTRRQKGIVNSQRSEKTPKK 54
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 300,202,191
Number of Sequences: 1657284
Number of extensions: 4413340
Number of successful extensions: 15817
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 15394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15801
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 17349842203
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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