Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0575
         (401 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles ...   184   1e-48
AJ973471-1|CAJ01518.1|  122|Anopheles gambiae hypothetical prote...    24   2.4  
AJ697731-1|CAG26924.1|  122|Anopheles gambiae putative chemosens...    24   2.4  
AJ697730-1|CAG26923.1|  122|Anopheles gambiae putative chemosens...    24   2.4  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    23   5.5  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    23   5.5  
AJ973473-1|CAJ01520.1|  127|Anopheles gambiae hypothetical prote...    22   7.3  
AF437891-1|AAL84186.1|  127|Anopheles gambiae sensory appendage ...    22   7.3  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    22   7.3  

>U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles
           gambiae putativeribosomal protein S8 mRNA, complete cds.
           ).
          Length = 135

 Score =  184 bits (447), Expect = 1e-48
 Identities = 82/119 (68%), Positives = 104/119 (87%)
 Frame = -3

Query: 399 YNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRS 220
           YNASNNEL+RTKTLVKNAI+V+DA+PFRQWYESHY LPLG+K+  +L   EE +++KKR+
Sbjct: 12  YNASNNELIRTKTLVKNAIIVIDASPFRQWYESHYLLPLGKKR--ELKAGEEDVLSKKRT 69

Query: 219 QKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRR 43
           +   RKY+ RQ+ AK++ A+EEQF+ GRLLAC++SRPGQ GRADGYILEGKELEFYL++
Sbjct: 70  KSNLRKYVKRQKNAKIDPAVEEQFNAGRLLACISSRPGQVGRADGYILEGKELEFYLKK 128


>AJ973471-1|CAJ01518.1|  122|Anopheles gambiae hypothetical protein
           protein.
          Length = 122

 Score = 23.8 bits (49), Expect = 2.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 337 YNNCILDKGLCTHQ 378
           Y  C+LDKG CT +
Sbjct: 44  YLKCLLDKGPCTQE 57


>AJ697731-1|CAG26924.1|  122|Anopheles gambiae putative chemosensory
           protein CSP2 protein.
          Length = 122

 Score = 23.8 bits (49), Expect = 2.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 337 YNNCILDKGLCTHQ 378
           Y  C+LDKG CT +
Sbjct: 44  YLKCLLDKGPCTQE 57


>AJ697730-1|CAG26923.1|  122|Anopheles gambiae putative chemosensory
           protein CSP1 protein.
          Length = 122

 Score = 23.8 bits (49), Expect = 2.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 337 YNNCILDKGLCTHQ 378
           Y  C+LDKG CT +
Sbjct: 44  YLKCLLDKGPCTQE 57


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 22.6 bits (46), Expect = 5.5
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -3

Query: 333 DATPFRQWYESHYTLP 286
           D TP   W+ SH T P
Sbjct: 43  DQTPAGSWWSSHLTEP 58


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 22.6 bits (46), Expect = 5.5
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -3

Query: 333 DATPFRQWYESHYTLP 286
           D TP   W+ SH T P
Sbjct: 43  DQTPAGSWWSSHLTEP 58


>AJ973473-1|CAJ01520.1|  127|Anopheles gambiae hypothetical protein
           protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 337 YNNCILDKGLCT 372
           Y  C+LD+G CT
Sbjct: 43  YYKCLLDQGRCT 54


>AF437891-1|AAL84186.1|  127|Anopheles gambiae sensory appendage
           protein protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 337 YNNCILDKGLCT 372
           Y  C+LD+G CT
Sbjct: 43  YYKCLLDQGRCT 54


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 4/34 (11%)
 Frame = -3

Query: 282 GRKKGAKLTEAEEAIINKKRS----QKTARKYLA 193
           G +KG    EA  A++ K+RS    ++T  +Y A
Sbjct: 507 GFRKGRSTGEAIAAVLKKRRSALLKKRTGNRYCA 540


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 323,205
Number of Sequences: 2352
Number of extensions: 4594
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32067225
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)