Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0572
         (632 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DBFFED Cluster: UPI0000DBFFED related cluster; n...    34   3.3  
UniRef50_Q537V4 Cluster: Telomerase reverse transcriptase; n=54;...    33   7.5  
UniRef50_UPI0000DD8177 Cluster: PREDICTED: hypothetical protein;...    32   10.0 
UniRef50_Q7RT69 Cluster: Streptococcus pyogenes AMV258, putative...    32   10.0 

>UniRef50_UPI0000DBFFED Cluster: UPI0000DBFFED related cluster; n=2;
           Rattus norvegicus|Rep: UPI0000DBFFED UniRef100 entry -
           Rattus norvegicus
          Length = 280

 Score = 33.9 bits (74), Expect = 3.3
 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
 Frame = -1

Query: 515 FILTKQCQFKNIHLL--LHTDVYH*DSFAFSQ*NNLV-KTY*VTHNLNHISLCTYICIIK 345
           + LT  C F NIHL    HT VY   S +++  +  +   Y  TH   H+    Y C + 
Sbjct: 105 YFLTYTCVFSNIHLCTHTHTPVY---SLSYTCVHLCIYYMYLFTHKHTHVYSLAYACALT 161

Query: 344 SLYMIILKIKH 312
           S+Y+    + H
Sbjct: 162 SIYLCTHCLTH 172


>UniRef50_Q537V4 Cluster: Telomerase reverse transcriptase; n=54;
           Neognathae|Rep: Telomerase reverse transcriptase -
           Gallus gallus (Chicken)
          Length = 1346

 Score = 32.7 bits (71), Expect = 7.5
 Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
 Frame = +2

Query: 179 QHYVLFYRKQFIYEKLKKIKVNDIFV-*Q*NQINSERLKLVRQRYY 313
           Q  +LFY ++FI+ KL+ I + D F       ++SE ++++RQ+ Y
Sbjct: 778 QKNMLFYYRKFIWGKLQNIGIRDHFAKVHLRALSSEEMEVIRQKKY 823


>UniRef50_UPI0000DD8177 Cluster: PREDICTED: hypothetical protein;
           n=3; Tetrapoda|Rep: PREDICTED: hypothetical protein -
           Homo sapiens
          Length = 498

 Score = 32.3 bits (70), Expect = 10.0
 Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
 Frame = -2

Query: 613 IYTYLKLKT-IHLFVTIS-RSLIRLYN*F*CLAINLYSQNNASLKIYIYYFIRMYTIKIP 440
           IYT++   T IH++  I   +LI +Y       I++Y+  +A + I+IY  I +YT+   
Sbjct: 184 IYTHVHDYTHIHIYTHIHIYTLIHIYT-----HIHIYTHIHAYVHIHIYTHIHIYTLIHI 238

Query: 439 LPLVNRTT**KHIKLHITLITYHYVLTFV**NHYI*LYLKLNI 311
              ++  T   HI  HI   T+ ++ T +    YI  Y+ ++I
Sbjct: 239 YTHIHAYT-HIHIYTHIHAYTHIHIYTHIHIYTYIHAYVHIHI 280


>UniRef50_Q7RT69 Cluster: Streptococcus pyogenes AMV258, putative;
           n=4; Plasmodium (Vinckeia)|Rep: Streptococcus pyogenes
           AMV258, putative - Plasmodium yoelii yoelii
          Length = 784

 Score = 32.3 bits (70), Expect = 10.0
 Identities = 16/40 (40%), Positives = 26/40 (65%)
 Frame = -1

Query: 407 TY*VTHNLNHISLCTYICIIKSLYMIILKIKHNIFAELIS 288
           T+ +T NLN I+LC  I I+K  Y+ +L  K+   ++LI+
Sbjct: 625 TFNITSNLNKINLCEQIFILK--YIQLLNFKNEYLSDLIN 662


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 503,414,181
Number of Sequences: 1657284
Number of extensions: 8933571
Number of successful extensions: 13850
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13838
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46881492319
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)