Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0572
         (632 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   2.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.8  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   2.8  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   6.5  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +1

Query: 31  FKHNHLNINEIASVTRGH*THASSV 105
           F+ +++ I E+A V  G+  +ASSV
Sbjct: 93  FQDHNIEITEVAPVLPGNYANASSV 117


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +1

Query: 31  FKHNHLNINEIASVTRGH*THASSV 105
           F+ +++ I E+A V  G+  +ASSV
Sbjct: 326 FQDHNIEITEVAPVLPGNYANASSV 350


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +1

Query: 31  FKHNHLNINEIASVTRGH*THASSV 105
           F+ +++ I E+A V  G+  +ASSV
Sbjct: 326 FQDHNIEITEVAPVLPGNYANASSV 350


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 261 CHTNMSLTFIFFNFS 217
           C  N+S+  IFFNF+
Sbjct: 61  CCLNLSIVTIFFNFA 75


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +2

Query: 341 MILLYKCKYIVICD 382
           +I L+ C  I++CD
Sbjct: 245 LIFLFNCTLIIMCD 258


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,559
Number of Sequences: 336
Number of extensions: 2820
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)