Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0572
         (632 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical pr...    29   2.1  
U41268-5|AAA82438.1|  349|Caenorhabditis elegans Hypothetical pr...    28   6.4  

>Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical protein
            T01H10.8 protein.
          Length = 2692

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = -1

Query: 203  FYKIKHSVDSRFNEAMYR*FFSNAS*AARNERQTDEAWVQCPRVTLAISFI 51
            F+KI + VD    +++YR FF   S     +   DEAW  C  V   + F+
Sbjct: 1609 FFKITNRVDCDEEDSLYRIFFEELS-----KWTLDEAWPNCIWVAADMMFV 1654


>Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical protein
            T01H10.8 protein.
          Length = 2692

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = -1

Query: 203  FYKIKHSVDSRFNEAMYR*FFSNAS*AARNERQTDEAWVQCPRVTLAISFI 51
            F+KI + VD    +++YR FF   S     +   DEAW  C  V   + F+
Sbjct: 1609 FFKITNRVDCDEEDSLYRIFFEELS-----KWTLDEAWPNCIWVAADMMFV 1654


>U41268-5|AAA82438.1|  349|Caenorhabditis elegans Hypothetical
           protein T14G12.6 protein.
          Length = 349

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = -2

Query: 622 SASIYTYLKLKTIHLFVTI 566
           S SIY YLK+ T+ LF+TI
Sbjct: 132 SDSIYFYLKMNTLSLFLTI 150


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,153,880
Number of Sequences: 27780
Number of extensions: 230129
Number of successful extensions: 360
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 360
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)