Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0571
(605 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0) 40 0.002
SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1) 38 0.005
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_14726| Best HMM Match : Ribosomal_L30 (HMM E-Value=6.6) 38 0.006
SB_51257| Best HMM Match : Pox_F16 (HMM E-Value=4.1) 37 0.011
SB_43828| Best HMM Match : XPG_N (HMM E-Value=1.8) 37 0.015
SB_19117| Best HMM Match : XPG_N (HMM E-Value=1.8) 37 0.015
SB_51961| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_48112| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_40765| Best HMM Match : DX (HMM E-Value=1.4) 37 0.015
SB_33578| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00076) 37 0.015
SB_26110| Best HMM Match : HipA_C (HMM E-Value=5.5) 37 0.015
SB_25119| Best HMM Match : Ribosomal_S27 (HMM E-Value=9.4) 37 0.015
SB_20120| Best HMM Match : RVT_1 (HMM E-Value=0) 37 0.015
SB_17278| Best HMM Match : RVT_1 (HMM E-Value=0.0082) 37 0.015
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 37 0.015
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 37 0.015
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 37 0.015
SB_25497| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.019
SB_14729| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.019
SB_26135| Best HMM Match : RVT_1 (HMM E-Value=0.072) 36 0.025
SB_43541| Best HMM Match : RVT_1 (HMM E-Value=0) 36 0.025
SB_49429| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.034
SB_31373| Best HMM Match : Put_DNA-bind_N (HMM E-Value=8.4) 36 0.034
SB_18046| Best HMM Match : RVT_1 (HMM E-Value=0.34) 36 0.034
SB_16492| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.034
SB_4935| Best HMM Match : Pox_F16 (HMM E-Value=5.3) 35 0.044
SB_33076| Best HMM Match : Put_DNA-bind_N (HMM E-Value=8.4) 35 0.044
SB_38808| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.059
SB_30407| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.059
SB_6030| Best HMM Match : rve (HMM E-Value=8.7e-30) 34 0.078
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 34 0.078
SB_31120| Best HMM Match : Pox_F16 (HMM E-Value=5) 34 0.10
SB_54752| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_20783| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0) 33 0.24
SB_2897| Best HMM Match : RVT_1 (HMM E-Value=3e-33) 32 0.31
SB_38717| Best HMM Match : Cornifin (HMM E-Value=7.2) 32 0.41
SB_37654| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.41
SB_19530| Best HMM Match : EMI (HMM E-Value=3.5) 32 0.41
SB_30049| Best HMM Match : FBA_2 (HMM E-Value=7) 31 0.55
SB_24816| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.55
SB_53803| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.72
SB_40344| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.72
SB_31047| Best HMM Match : CHORD (HMM E-Value=6.2) 31 0.96
SB_7946| Best HMM Match : DUF434 (HMM E-Value=7.5) 31 0.96
SB_4412| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32) 30 1.7
SB_22775| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_38708| Best HMM Match : p450 (HMM E-Value=1.4) 29 3.9
SB_58576| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_56220| Best HMM Match : RVT_1 (HMM E-Value=3.7e-16) 28 5.1
SB_48902| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_40983| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_40552| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_38731| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_34180| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0) 28 5.1
SB_33284| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_32643| Best HMM Match : Carla_C4 (HMM E-Value=9.9) 28 5.1
SB_30890| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_29924| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 28 5.1
SB_24244| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_22251| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_11879| Best HMM Match : WD40 (HMM E-Value=5.8e-21) 28 5.1
SB_41869| Best HMM Match : Laminin_EGF (HMM E-Value=9.7e-23) 28 5.1
SB_36764| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_36762| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_29800| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_24298| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_19305| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_14496| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_50657| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_28584| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_20170| Best HMM Match : RVT_1 (HMM E-Value=0.00014) 28 6.7
SB_54733| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_36259| Best HMM Match : PHD (HMM E-Value=5.3e-05) 27 8.9
SB_49009| Best HMM Match : Ribosomal_S26e (HMM E-Value=7.3) 27 8.9
>SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 885
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/57 (36%), Positives = 28/57 (49%)
Frame = +3
Query: 207 RHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGLWRV 377
R R HP PL +S+ SF RTI WN LP+ +F E + FK + R+
Sbjct: 823 RKTRRSHPESFIPLSTSSASEHLSFFSRTIIQWNNLPALLFNEPCSLPIFKDKISRL 879
>SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1)
Length = 2075
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/51 (41%), Positives = 27/51 (52%)
Frame = +3
Query: 216 SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGL 368
SR H L+++ + F SF PRTIR WN LP+ V D+ FK L
Sbjct: 1627 SRRHSRTYHQLQANILAFNYSFFPRTIRTWNLLPAEVV-NAADLPSFKSAL 1676
>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3142
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/51 (41%), Positives = 27/51 (52%)
Frame = +3
Query: 216 SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGL 368
SR H L+++ + F SF PRTIR WN LP+ V D+ FK L
Sbjct: 1073 SRRHSRTYHQLQANILAFNYSFFPRTIRTWNLLPAEVV-NAADLPSFKSAL 1122
>SB_14726| Best HMM Match : Ribosomal_L30 (HMM E-Value=6.6)
Length = 231
Score = 37.9 bits (84), Expect = 0.006
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +3
Query: 225 HPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGL 368
H + L + T ++ SFLPR +RLWN LP +V R F GL
Sbjct: 184 HSEFYTILNARTDIYKYSFLPRALRLWNNLPQSVIDMRGCPEAFHSGL 231
>SB_51257| Best HMM Match : Pox_F16 (HMM E-Value=4.1)
Length = 243
Score = 37.1 bits (82), Expect = 0.011
Identities = 22/56 (39%), Positives = 28/56 (50%)
Frame = +3
Query: 213 RSRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGLWRVL 380
RSR + ++S+ + SF PRTIR WN LPS V E + FK VL
Sbjct: 177 RSRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEVV-ESSSIDSFKSSALPVL 231
>SB_43828| Best HMM Match : XPG_N (HMM E-Value=1.8)
Length = 174
Score = 36.7 bits (81), Expect = 0.015
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Frame = +3
Query: 117 ICILYRMFHGECSEELFEMIPTSRFY--HRTARHR-SRVHPYYLEPLRSSTVRFQRSFLP 287
+ +LY++ G+ I TS + H+ R R S YY E +++ ++ SF P
Sbjct: 88 LTLLYKLSRGQID------IDTSMYLRPHQDLRTRNSHNFKYYQE--KATKNKYFYSFFP 139
Query: 288 RTIRLWNELPSTVFPERYDMSFFKRGLWRVLNGRQ 392
RTIR WN LP+ + E + FKR L LN +
Sbjct: 140 RTIRHWNTLPNELV-ELGSIEHFKRDLEIYLNNNK 173
>SB_19117| Best HMM Match : XPG_N (HMM E-Value=1.8)
Length = 361
Score = 36.7 bits (81), Expect = 0.015
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Frame = +3
Query: 117 ICILYRMFHGECSEELFEMIPTSRFY--HRTARHR-SRVHPYYLEPLRSSTVRFQRSFLP 287
+ +LY++ G+ I TS + H+ R R S YY E +++ ++ SF P
Sbjct: 275 LTLLYKLSRGQID------IDTSMYLRPHQDLRTRNSHNFKYYQE--KATKNKYFYSFFP 326
Query: 288 RTIRLWNELPSTVFPERYDMSFFKRGLWRVLNGRQ 392
RTIR WN LP+ + E + FKR L LN +
Sbjct: 327 RTIRHWNTLPNELV-ELGSIEHFKRDLEIYLNNNK 360
>SB_51961| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 193
Score = 36.7 bits (81), Expect = 0.015
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 216 SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTV 326
+R H + L+S+ + + SF PR IR+WN LPS V
Sbjct: 122 TRRHNHSFLQLQSNILSYNYSFFPRAIRIWNLLPSNV 158
>SB_48112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 232
Score = 36.7 bits (81), Expect = 0.015
Identities = 20/52 (38%), Positives = 28/52 (53%)
Frame = +3
Query: 213 RSRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGL 368
R++ +Y P + T ++ SFLPR +RLWN LP +V R F GL
Sbjct: 182 RTQHSEFYTIP-NARTDIYKYSFLPRALRLWNNLPQSVIDMRGCPEAFHAGL 232
>SB_40765| Best HMM Match : DX (HMM E-Value=1.4)
Length = 278
Score = 36.7 bits (81), Expect = 0.015
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Frame = +3
Query: 117 ICILYRMFHGECSEELFEMIPTSRFY--HRTARHR-SRVHPYYLEPLRSSTVRFQRSFLP 287
+ +LY++ G+ I TS + H+ R R S YY E +++ ++ SF P
Sbjct: 192 LTLLYKLSRGQID------IDTSTYLRPHQDLRTRNSHNFKYYQE--KATKNKYFYSFFP 243
Query: 288 RTIRLWNELPSTVFPERYDMSFFKRGLWRVLNGRQ 392
RTIR WN LP+ + E + FKR L LN +
Sbjct: 244 RTIRHWNTLPNELV-ELDSIEHFKRDLEIYLNNNK 277
>SB_33578| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00076)
Length = 888
Score = 36.7 bits (81), Expect = 0.015
Identities = 27/84 (32%), Positives = 35/84 (41%)
Frame = +3
Query: 174 IPTSRFYHRTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSF 353
+P S R HP + + + T F+ SF+PR IRLWN L TV Y F
Sbjct: 713 LPLSTLSKPLRRSERTSHPEHYDIPYARTNIFKYSFVPRAIRLWNSLEVTVVLAAY--FF 770
Query: 354 FKRGLWRVLNGRQRRSSAPGIADV 425
L +L + R A DV
Sbjct: 771 LLYDLATLLGAKPGRRLAKDTFDV 794
>SB_26110| Best HMM Match : HipA_C (HMM E-Value=5.5)
Length = 210
Score = 36.7 bits (81), Expect = 0.015
Identities = 23/68 (33%), Positives = 35/68 (51%)
Frame = +3
Query: 123 ILYRMFHGECSEELFEMIPTSRFYHRTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRL 302
IL+ FH ++ +P R+ R R YY + L+++T+ F SF R IR+
Sbjct: 120 ILFYKFHNSL---IYAKLPD--LVTRSTRSTRRKELYYNQ-LQANTLAFNYSFFARAIRI 173
Query: 303 WNELPSTV 326
WN LP+ V
Sbjct: 174 WNLLPNDV 181
>SB_25119| Best HMM Match : Ribosomal_S27 (HMM E-Value=9.4)
Length = 443
Score = 36.7 bits (81), Expect = 0.015
Identities = 22/63 (34%), Positives = 29/63 (46%)
Frame = +3
Query: 216 SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGLWRVLNGRQR 395
+R H + L S+ + F SF PR IR WN LP + SF L + +Q
Sbjct: 262 TRRHSLSFQQLHSNILSFNYSFFPRAIRAWNLLPDNIVNLSNLESFKTAALPAIRQLKQC 321
Query: 396 RSS 404
RSS
Sbjct: 322 RSS 324
>SB_20120| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 666
Score = 36.7 bits (81), Expect = 0.015
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Frame = +3
Query: 117 ICILYRMFHGECSEELFEMIPTSRFY--HRTARHR-SRVHPYYLEPLRSSTVRFQRSFLP 287
+ +LY++ G+ I TS + H+ R R S YY E +++ ++ SF P
Sbjct: 580 LTLLYKLSRGQID------IDTSMYLRPHQDLRTRNSHNFKYYQE--KATKNKYFYSFFP 631
Query: 288 RTIRLWNELPSTVFPERYDMSFFKRGLWRVLNGRQ 392
RTIR WN LP+ + E + FKR L LN +
Sbjct: 632 RTIRHWNTLPNELV-ELGSIEHFKRDLEIYLNNNK 665
>SB_17278| Best HMM Match : RVT_1 (HMM E-Value=0.0082)
Length = 506
Score = 36.7 bits (81), Expect = 0.015
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 216 SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTV 326
+R H + L+S+ + + SF PR IR+WN LPS V
Sbjct: 441 TRRHNHSFLQLQSNILSYNYSFFPRAIRIWNLLPSNV 477
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 36.7 bits (81), Expect = 0.015
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 216 SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTV 326
+R H + L+S+ + + SF PR IR+WN LPS V
Sbjct: 1427 TRRHNHSFLQLQSNILSYNYSFFPRAIRIWNLLPSNV 1463
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 36.7 bits (81), Expect = 0.015
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 216 SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTV 326
+R H + L+S+ + + SF PR IR+WN LPS V
Sbjct: 387 TRRHNHSFLQLQSNILSYNYSFFPRAIRIWNLLPSNV 423
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 36.7 bits (81), Expect = 0.015
Identities = 23/68 (33%), Positives = 35/68 (51%)
Frame = +3
Query: 123 ILYRMFHGECSEELFEMIPTSRFYHRTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRL 302
IL+ FH ++ +P R+ R R YY + L+++T+ F SF R IR+
Sbjct: 480 ILFYKFHNSL---IYAKLPD--LVTRSTRSTRRKELYYNQ-LQANTLAFNYSFFARAIRI 533
Query: 303 WNELPSTV 326
WN LP+ V
Sbjct: 534 WNLLPNDV 541
>SB_25497| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 372
Score = 36.3 bits (80), Expect = 0.019
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 198 RTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTV 326
R+ R R YY + L+++T+ F SF R IR+WN LP+ V
Sbjct: 294 RSTRSTRRKELYYNQ-LQANTLAFNYSFFARAIRIWNLLPNDV 335
>SB_14729| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 36.3 bits (80), Expect = 0.019
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 198 RTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTV 326
R+ R R YY + L+++T+ F SF R IR+WN LP+ V
Sbjct: 245 RSTRSTRRKELYYNQ-LQANTLAFNYSFFARAIRIWNLLPNDV 286
>SB_26135| Best HMM Match : RVT_1 (HMM E-Value=0.072)
Length = 375
Score = 35.9 bits (79), Expect = 0.025
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 195 HRTARHR-SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGLW 371
H+ R R S YY E +++ ++ SF PRTIR WN LP+ + E + FKR L
Sbjct: 311 HQDLRTRNSHNFKYYQE--KATKNKYFYSFFPRTIRHWNTLPNELV-ELGSIEHFKRDLE 367
Query: 372 RVLNGRQ 392
LN +
Sbjct: 368 IYLNNNK 374
>SB_43541| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 581
Score = 35.9 bits (79), Expect = 0.025
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 195 HRTARHR-SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGLW 371
H+ R R S YY E +++ ++ SF PRTIR WN LP+ + E + FKR L
Sbjct: 517 HQDLRTRNSHNFKYYQE--KATKNKYFYSFFPRTIRHWNTLPNELV-ELGSIEHFKRDLE 573
Query: 372 RVLNGRQ 392
LN +
Sbjct: 574 IYLNNNK 580
>SB_49429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 918
Score = 35.5 bits (78), Expect = 0.034
Identities = 21/55 (38%), Positives = 27/55 (49%)
Frame = +3
Query: 216 SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGLWRVL 380
SR + ++S+ + SF PRTIR WN LPS V E + FK VL
Sbjct: 853 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEVI-ESSSIDSFKSSALPVL 906
>SB_31373| Best HMM Match : Put_DNA-bind_N (HMM E-Value=8.4)
Length = 198
Score = 35.5 bits (78), Expect = 0.034
Identities = 21/55 (38%), Positives = 27/55 (49%)
Frame = +3
Query: 216 SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGLWRVL 380
SR + ++S+ + SF PRTIR WN LPS V E + FK VL
Sbjct: 133 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEVI-ESSSIDSFKSSALPVL 186
>SB_18046| Best HMM Match : RVT_1 (HMM E-Value=0.34)
Length = 837
Score = 35.5 bits (78), Expect = 0.034
Identities = 21/55 (38%), Positives = 27/55 (49%)
Frame = +3
Query: 216 SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGLWRVL 380
SR + ++S+ + SF PRTIR WN LPS V E + FK VL
Sbjct: 772 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEVI-ESSSIDSFKSSALPVL 825
>SB_16492| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 35.5 bits (78), Expect = 0.034
Identities = 16/68 (23%), Positives = 37/68 (54%)
Frame = +3
Query: 117 ICILYRMFHGECSEELFEMIPTSRFYHRTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTI 296
+ +L+++ +G+ S L ++ + + T + S + + ++ ++ S+ PRT+
Sbjct: 202 LVLLFKIKNGDVSISLASLLSPATSRYNTRNYHSNNYRLFFTHNQNY---YRNSYFPRTV 258
Query: 297 RLWNELPS 320
+LWN LPS
Sbjct: 259 KLWNSLPS 266
>SB_4935| Best HMM Match : Pox_F16 (HMM E-Value=5.3)
Length = 243
Score = 35.1 bits (77), Expect = 0.044
Identities = 21/55 (38%), Positives = 27/55 (49%)
Frame = +3
Query: 216 SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGLWRVL 380
SR + ++S+ + SF PRTIR WN LPS V E + FK VL
Sbjct: 178 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEVV-ESSSIDSFKSSALPVL 231
>SB_33076| Best HMM Match : Put_DNA-bind_N (HMM E-Value=8.4)
Length = 152
Score = 35.1 bits (77), Expect = 0.044
Identities = 21/55 (38%), Positives = 27/55 (49%)
Frame = +3
Query: 216 SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGLWRVL 380
SR + ++S+ + SF PRTIR WN LPS V E + FK VL
Sbjct: 87 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEVV-ESSSIDSFKSSALPVL 140
>SB_38808| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 824
Score = 34.7 bits (76), Expect = 0.059
Identities = 22/66 (33%), Positives = 34/66 (51%)
Frame = +3
Query: 195 HRTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGLWR 374
H+ R R+ H + +++ ++ SF PRTIR WN LP+ + E + FKR L
Sbjct: 760 HQDLRTRNS-HNFKCYQEKATKNKYFYSFFPRTIRHWNTLPNELV-ELGSIEHFKRDLEI 817
Query: 375 VLNGRQ 392
LN +
Sbjct: 818 YLNNNK 823
>SB_30407| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 788
Score = 34.7 bits (76), Expect = 0.059
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +3
Query: 216 SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFK 359
SR + ++S+ + SF PRTIR WN LPS V E + FK
Sbjct: 544 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEVI-ESSSIDSFK 590
>SB_6030| Best HMM Match : rve (HMM E-Value=8.7e-30)
Length = 1280
Score = 34.3 bits (75), Expect = 0.078
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3
Query: 234 YLEPLRSSTVRFQRSFLPRTIRLWNELPSTV 326
Y L+++T+ F SF R IR+WN LP+ V
Sbjct: 1221 YCNQLQANTLTFNYSFFARAIRIWNLLPNDV 1251
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 34.3 bits (75), Expect = 0.078
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +3
Query: 216 SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTV 326
SR + ++S+ + SF PRTIR WN LPS V
Sbjct: 440 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEV 476
>SB_31120| Best HMM Match : Pox_F16 (HMM E-Value=5)
Length = 284
Score = 33.9 bits (74), Expect = 0.10
Identities = 20/55 (36%), Positives = 27/55 (49%)
Frame = +3
Query: 216 SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGLWRVL 380
SR + ++S+ + SF PRTIR WN LP+ V E + FK VL
Sbjct: 219 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPAQVV-ESSSIDSFKSSALPVL 272
>SB_54752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 792
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +3
Query: 201 TARHRSR-VHPYYLEPLRSSTVRFQR-SFLPRTIRLWNELPS 320
T+R+ +R HP + + R S+ PRT++LWN LPS
Sbjct: 722 TSRYNTRSYHPNNYRLFSTHNQNYYRNSYFPRTVKLWNSLPS 763
>SB_20783| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +3
Query: 201 TARHRSR-VHPYYLEPLRSSTVRFQR-SFLPRTIRLWNELPS 320
T+R+ +R HP + + R S+ PRT++LWN LPS
Sbjct: 225 TSRYNTRSYHPNNYRLFSTHNQNYYRNSYFPRTVKLWNSLPS 266
>SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0)
Length = 3891
Score = 32.7 bits (71), Expect = 0.24
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 244 RCGHPQCVSRDLFCHVPSGYGMSSPPRCFPSAMTCPSSNEAC 369
RC +C+SRD C + G SS + +TCP+ C
Sbjct: 3052 RCPSGRCISRDWLCDGDNDCGDSSDEKAGECHVTCPAGQARC 3093
Score = 32.3 bits (70), Expect = 0.31
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 283 CHVPSGYGMSSPPRCFPSAMTCPSSNEAC 369
C P GY + +P RC S +C SS AC
Sbjct: 2147 CSCPQGYRLENPYRCVLSNASCASSEFAC 2175
>SB_2897| Best HMM Match : RVT_1 (HMM E-Value=3e-33)
Length = 609
Score = 32.3 bits (70), Expect = 0.31
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Frame = +3
Query: 117 ICILYRMFHGECSEELFEMIPTSRFY--HRTARHR-SRVHPYYLEPLRSSTVRFQRSFLP 287
+ +LY++ G+ I TS + H+ R R S YY E +++ ++ SF P
Sbjct: 521 LTLLYKLSRGQID------IDTSMYLRPHQDLRTRNSHNFKYYQE--KATKNKYFYSFFP 572
Query: 288 RTIRLWNELPS 320
RTIR WN LP+
Sbjct: 573 RTIRHWNTLPN 583
>SB_38717| Best HMM Match : Cornifin (HMM E-Value=7.2)
Length = 318
Score = 31.9 bits (69), Expect = 0.41
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = +1
Query: 391 SGVALPLALLTSMSDGNHSPSGGP 462
SG+ PLA TS SD H P GGP
Sbjct: 33 SGIFSPLASSTSASDSRHRPVGGP 56
>SB_37654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 31.9 bits (69), Expect = 0.41
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +3
Query: 216 SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFP 332
S + Y L + F SF RTI +WN LP VFP
Sbjct: 809 SACNSYQFSLLPAKINAFLFSFYSRTIPVWNALPQAVFP 847
>SB_19530| Best HMM Match : EMI (HMM E-Value=3.5)
Length = 244
Score = 31.9 bits (69), Expect = 0.41
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +3
Query: 117 ICILYRMFHGECSEELFEMIPTSRFYHRTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTI 296
+ YR+ G SE T + Y T ++ HP + T F+ SF P I
Sbjct: 167 LAFFYRINKG-LSEISMPPYATPQMYTITRQY----HPQRFALVSCKTNVFKESFFPHAI 221
Query: 297 RLWNELP-STV 326
R+WN LP ST+
Sbjct: 222 RMWNGLPVSTI 232
>SB_30049| Best HMM Match : FBA_2 (HMM E-Value=7)
Length = 282
Score = 31.5 bits (68), Expect = 0.55
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 246 LRSSTVRFQRSFLPRTIRLWNELPSTV 326
L+S+ + + SF R IR+WN LPS V
Sbjct: 227 LQSNILSYNYSFFARAIRIWNLLPSNV 253
>SB_24816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 662
Score = 31.5 bits (68), Expect = 0.55
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 225 HPYYLEPLRSSTVRFQRSFLPRTIRLWNELP-STV 326
HP + T F+ SF P IR+WN LP ST+
Sbjct: 616 HPQRFALVSCKTNVFKESFFPHAIRMWNGLPVSTI 650
>SB_53803| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 619
Score = 31.1 bits (67), Expect = 0.72
Identities = 20/72 (27%), Positives = 29/72 (40%)
Frame = +1
Query: 244 RCGHPQCVSRDLFCHVPSGYGMSSPPRCFPSAMTCPSSNEACGEY*TVGSGVALPLALLT 423
+CG PQC C + S P+C + C + CG + + G+ P +
Sbjct: 179 QCGSPQCGIHSTQCGIHSPQCGIHSPQCGIYSPQCGIHSPQCGIH-STQCGIHSPQCGIH 237
Query: 424 SMSDGNHSPSGG 459
S G HSP G
Sbjct: 238 SPQCGIHSPQCG 249
>SB_40344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 401
Score = 31.1 bits (67), Expect = 0.72
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +3
Query: 198 RTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELP 317
RT + RS HP L T F+ SF RTI+ WN+LP
Sbjct: 346 RTRQLRSS-HPDKFIELCPRTEAFKNSFFCRTIKEWNKLP 384
>SB_31047| Best HMM Match : CHORD (HMM E-Value=6.2)
Length = 251
Score = 30.7 bits (66), Expect = 0.96
Identities = 20/71 (28%), Positives = 31/71 (43%)
Frame = +3
Query: 105 KNICICILYRMFHGECSEELFEMIPTSRFYHRTARHRSRVHPYYLEPLRSSTVRFQRSFL 284
K + + Y++ HG + +P R + +S Y P S+ ++SF
Sbjct: 165 KRARLLMFYKIHHGLVVTDGLPAVPPMYIISRHMKSQS-----YKVPPSSTDYHKKKSFF 219
Query: 285 PRTIRLWNELP 317
P TIR WN LP
Sbjct: 220 PPTIRDWNCLP 230
>SB_7946| Best HMM Match : DUF434 (HMM E-Value=7.5)
Length = 294
Score = 30.7 bits (66), Expect = 0.96
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +3
Query: 198 RTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELP 317
RT + RS HP L +T ++ SF RTI+ WN+LP
Sbjct: 237 RTRQLRSS-HPDKFIELCPTTEAYKNSFFCRTIKEWNKLP 275
>SB_4412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1095
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = -1
Query: 218 TPVAGGAMVKTRCRYHLEQFL---RALPMEHTVQNTDTYIFQ*PTTAYGIIPDNSTYSTN 48
TP+ GG K+ CR H+ ++L + LP ++ N + T +IP Y+T
Sbjct: 19 TPLLGGIKKKSNCRKHIGRYLPITKWLP-HYSFNNLQCDMIGGLTVGLMVIPQGLAYATI 77
Query: 47 ASVDT 33
A + T
Sbjct: 78 AGLPT 82
>SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32)
Length = 698
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +3
Query: 198 RTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELP 317
RT + RS + ++E L T ++ SF RTI+ WN+LP
Sbjct: 643 RTRQLRSSLPDKFIE-LCPRTEAYKNSFFCRTIKEWNKLP 681
>SB_22775| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 246 LRSSTVRFQRSFLPRTIRLWN 308
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFDMSFIPRTIRTWN 124
>SB_38708| Best HMM Match : p450 (HMM E-Value=1.4)
Length = 176
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -3
Query: 426 GRQQCQGQSYAAAYRLILSTSLV*RRTCHSARETP 322
GR+ C GQS A A ++ ++ R T + R+TP
Sbjct: 115 GRRVCVGQSVAKAELFLIVARMIQRYTFETPRDTP 149
>SB_58576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 246 LRSSTVRFQRSFLPRTIRLWN 308
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_56220| Best HMM Match : RVT_1 (HMM E-Value=3.7e-16)
Length = 453
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 246 LRSSTVRFQRSFLPRTIRLWN 308
L+++ F SF+PRTIR WN
Sbjct: 398 LQANVNAFGMSFIPRTIRTWN 418
>SB_48902| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 246 LRSSTVRFQRSFLPRTIRLWN 308
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_40983| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 246 LRSSTVRFQRSFLPRTIRLWN 308
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_40552| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 246 LRSSTVRFQRSFLPRTIRLWN 308
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_38731| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 246 LRSSTVRFQRSFLPRTIRLWN 308
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_34180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 246 LRSSTVRFQRSFLPRTIRLWN 308
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 522
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 246 LRSSTVRFQRSFLPRTIRLWN 308
L+++ F SF+PRTIR WN
Sbjct: 467 LQANVNAFGMSFIPRTIRTWN 487
>SB_33284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 263
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 246 LRSSTVRFQRSFLPRTIRLWN 308
L+++ F SF+PRTIR WN
Sbjct: 208 LQANVNAFGMSFIPRTIRTWN 228
>SB_32643| Best HMM Match : Carla_C4 (HMM E-Value=9.9)
Length = 159
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 246 LRSSTVRFQRSFLPRTIRLWN 308
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_30890| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 246 LRSSTVRFQRSFLPRTIRLWN 308
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_29924| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 246 LRSSTVRFQRSFLPRTIRLWN 308
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 246 LRSSTVRFQRSFLPRTIRLWN 308
L+++ F SF+PRTIR WN
Sbjct: 837 LQANVNAFGMSFIPRTIRTWN 857
>SB_24244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 246 LRSSTVRFQRSFLPRTIRLWN 308
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_22251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 497
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 246 LRSSTVRFQRSFLPRTIRLWN 308
L+++ F SF+PRTIR WN
Sbjct: 442 LQANVNAFGMSFIPRTIRTWN 462
>SB_11879| Best HMM Match : WD40 (HMM E-Value=5.8e-21)
Length = 447
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +1
Query: 178 RHLVFTIAPPATGVEFIHTTWNRCGHPQCVSRDLFC 285
+ LV P TG+ TTW+ G PQ D+ C
Sbjct: 30 KSLVIWQPDPDTGIWIETTTWHEIGRPQVHGYDMQC 65
>SB_41869| Best HMM Match : Laminin_EGF (HMM E-Value=9.7e-23)
Length = 198
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/58 (31%), Positives = 24/58 (41%)
Frame = +1
Query: 127 CTVCSMGSALRNCSR*YRHLVFTIAPPATGVEFIHTTWNRCGHPQCVSRDLFCHVPSG 300
C +C+ C R + LVF P T T ++RC C R FCH +G
Sbjct: 46 CELCTNNVQGPECVRWWAFLVF---PSYTRQPMGGTPFDRCVLCSCNDRSRFCHPETG 100
>SB_36764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 246 LRSSTVRFQRSFLPRTIRLWN 308
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_36762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 246 LRSSTVRFQRSFLPRTIRLWN 308
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_29800| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 246 LRSSTVRFQRSFLPRTIRLWN 308
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_24298| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 246 LRSSTVRFQRSFLPRTIRLWN 308
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_19305| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 246 LRSSTVRFQRSFLPRTIRLWN 308
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_14496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 110
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 246 LRSSTVRFQRSFLPRTIRLWN 308
L+++ F SF+PRTIR WN
Sbjct: 55 LQANVNAFGMSFIPRTIRTWN 75
>SB_50657| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 244 RCGHPQCVSRDLFCHVPSGYGMSSPPR-CFPSAMT 345
RC + +C+S L C + G S R C PSA T
Sbjct: 11 RCANGRCISGALVCDLDDDCGDESDERGCAPSAAT 45
>SB_28584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/72 (22%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +3
Query: 117 IC-ILYRMFHGECSEELFEMIPTSRFYHRTARHRSRVHPYYLEPLRSSTVRFQRSFLPRT 293
+C ++Y +G + + ++ H S + +Y++ S + QR+ R
Sbjct: 72 VCHLMYDTRNGTAPPNILNLFTDTKSVHSYNTRSSTSNKFYIQ---KSRLEIQRNSFSRV 128
Query: 294 -IRLWNELPSTV 326
R+WNELP ++
Sbjct: 129 GARVWNELPQSL 140
>SB_20170| Best HMM Match : RVT_1 (HMM E-Value=0.00014)
Length = 1212
Score = 27.9 bits (59), Expect = 6.7
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Frame = +1
Query: 193 TIAPPATGVEFIHTTWNRCGHPQCVSR-DLFCHV-----PSGYGMSSPPRCFPSAMTCPS 354
T AP A +T N P+ + R + FC V PS +SP R FPS T S
Sbjct: 489 TDAPSARRHSRKNTIPNLTSEPRSLKRNEHFCQVRQLFEPSNVTTTSPARAFPSTDTLHS 548
Query: 355 SN 360
+N
Sbjct: 549 AN 550
>SB_54733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 303
Score = 27.5 bits (58), Expect = 8.9
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 95 TTAYGIIPDNSTYSTNASVDTCDP 24
TT + PDN+TY N ++D +P
Sbjct: 129 TTLDAVEPDNTTYPDNTTLDAVEP 152
>SB_36259| Best HMM Match : PHD (HMM E-Value=5.3e-05)
Length = 790
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +3
Query: 276 SFLPRTIRLWNELPSTVFPE-RYDMSF 353
SF P +I+ WN LP+T R + SF
Sbjct: 752 SFFPWSIKFWNNLPATALKSTRVNQSF 778
>SB_49009| Best HMM Match : Ribosomal_S26e (HMM E-Value=7.3)
Length = 163
Score = 27.5 bits (58), Expect = 8.9
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +3
Query: 303 WNELPSTVFPERYDMSFFKRGLWRVLNGRQR--RSSAPGIADVHERR*PLTIRWAVRSSA 476
W+E ER+ + ++ L+R NGRQ+ R A ERR R A+RS
Sbjct: 26 WDERMEARLSERHTLLRLRKALYRKGNGRQKALRGRVGLFASHCERR---LRRTALRSRG 82
Query: 477 YTAIKK 494
+T I K
Sbjct: 83 WTKILK 88
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,523,493
Number of Sequences: 59808
Number of extensions: 499980
Number of successful extensions: 1700
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 1505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1700
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1475788250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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