Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0571
(605 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g25420.1 68418.m03016 xanthine/uracil permease family protein... 29 3.2
At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical t... 28 5.5
At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical t... 28 5.5
At5g55800.1 68418.m06954 DC1 domain-containing protein contains ... 27 7.3
At4g18820.1 68417.m02778 expressed protein 27 7.3
At3g63260.2 68416.m07109 protein kinase, putative (MRK1) identic... 27 7.3
At3g63260.1 68416.m07108 protein kinase, putative (MRK1) identic... 27 7.3
At4g34140.1 68417.m04845 D111/G-patch domain-containing protein ... 27 9.6
At2g31370.2 68415.m03834 bZIP transcription factor (POSF21) iden... 27 9.6
At2g31370.1 68415.m03833 bZIP transcription factor (POSF21) iden... 27 9.6
>At5g25420.1 68418.m03016 xanthine/uracil permease family protein
contains Pfam profile: PF00860 permease family
Length = 419
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -3
Query: 282 KKISGNALWMTAAVPGSMDELYSGGGRCDGKNEMSVS 172
K I G + +M ++P E Y+G GRCD K+++ V+
Sbjct: 373 KFILGFSFFMAISIPQYFREYYNGVGRCD-KSDIHVT 408
>At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 27.9 bits (59), Expect = 5.5
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +1
Query: 253 HPQCVSRDLFCHVPSGYGMSSPPRCFPSAMTCPS 354
HP S H PSG SSPP P +T PS
Sbjct: 119 HPSTPSHPTPSHPPSGGYYSSPPPRTPVVVTPPS 152
>At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 27.9 bits (59), Expect = 5.5
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +1
Query: 253 HPQCVSRDLFCHVPSGYGMSSPPRCFPSAMTCPS 354
HP S H PSG SSPP P +T PS
Sbjct: 119 HPSTPSHPTPSHPPSGGYYSSPPPRTPVVVTPPS 152
>At5g55800.1 68418.m06954 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 578
Score = 27.5 bits (58), Expect = 7.3
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 123 ILYRMFHGECSEELFEMIPTSRFYH 197
I +MFH EC E FE+I S +H
Sbjct: 108 ICEKMFHKECVESPFEIIHPSHPFH 132
>At4g18820.1 68417.m02778 expressed protein
Length = 1111
Score = 27.5 bits (58), Expect = 7.3
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -3
Query: 195 GKNEMSVSSRTIPQSTPH 142
GK+EMSV+S T+PQ H
Sbjct: 267 GKSEMSVASNTLPQVEKH 284
>At3g63260.2 68416.m07109 protein kinase, putative (MRK1) identical
to ATMRK1 [Arabidopsis thaliana] gi|2351097|dbj|BAA22079
Length = 344
Score = 27.5 bits (58), Expect = 7.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 186 EMSVSSRTIPQSTPHGTYGTKYRYIY 109
E+ +S + HGTYGT YR +Y
Sbjct: 77 EIDLSKLDMKHVLAHGTYGTVYRGVY 102
>At3g63260.1 68416.m07108 protein kinase, putative (MRK1) identical
to ATMRK1 [Arabidopsis thaliana] gi|2351097|dbj|BAA22079
Length = 391
Score = 27.5 bits (58), Expect = 7.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 186 EMSVSSRTIPQSTPHGTYGTKYRYIY 109
E+ +S + HGTYGT YR +Y
Sbjct: 77 EIDLSKLDMKHVLAHGTYGTVYRGVY 102
>At4g34140.1 68417.m04845 D111/G-patch domain-containing protein
contains Pfam PF01585: G-patch domain
Length = 418
Score = 27.1 bits (57), Expect = 9.6
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 21 ERIARINGRICRISAIIRNNTVCSCWLLKNICIC 122
E++AR+ GR+ R SA + + V LLK IC
Sbjct: 195 EQVARLVGRLVRQSANLHPSVVSGGTLLKTAPIC 228
>At2g31370.2 68415.m03834 bZIP transcription factor (POSF21)
identical to GB:Q04088
Length = 398
Score = 27.1 bits (57), Expect = 9.6
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = -1
Query: 251 PQRFQVVWMNSTPVAGGAMVKTRCRYHLEQFLRALPMEHTVQNTDTYIFQ*PTTAYGIIP 72
P+R + +W N A KTR + LE+ ++ L E T + + Q T G+
Sbjct: 202 PKRAKRIWANRQSAARSKERKTRYIFELERKVQTLQTEATTLSAQLTLLQRDTN--GLTV 259
Query: 71 DNS 63
+N+
Sbjct: 260 ENN 262
>At2g31370.1 68415.m03833 bZIP transcription factor (POSF21)
identical to GB:Q04088
Length = 398
Score = 27.1 bits (57), Expect = 9.6
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = -1
Query: 251 PQRFQVVWMNSTPVAGGAMVKTRCRYHLEQFLRALPMEHTVQNTDTYIFQ*PTTAYGIIP 72
P+R + +W N A KTR + LE+ ++ L E T + + Q T G+
Sbjct: 202 PKRAKRIWANRQSAARSKERKTRYIFELERKVQTLQTEATTLSAQLTLLQRDTN--GLTV 259
Query: 71 DNS 63
+N+
Sbjct: 260 ENN 262
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,620,734
Number of Sequences: 28952
Number of extensions: 332098
Number of successful extensions: 807
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 807
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1206913392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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