Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0570
         (566 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q01DH4 Cluster: Homology to unknown gene; n=2; Ostreoco...    34   2.7  
UniRef50_Q030A6 Cluster: Putative uncharacterized protein; n=2; ...    33   6.2  
UniRef50_Q9HPV0 Cluster: Cell division cycle protein; n=1; Halob...    33   6.2  

>UniRef50_Q01DH4 Cluster: Homology to unknown gene; n=2;
           Ostreococcus|Rep: Homology to unknown gene -
           Ostreococcus tauri
          Length = 259

 Score = 33.9 bits (74), Expect = 2.7
 Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
 Frame = +3

Query: 51  RTCSRIRSTENIRRSDRCWI-GFSKNRK*ASAERTDCQERAATHRPVRTPRQSPTIGKCS 227
           R   R  S E  R + R  + G S+ R+ AS    D Q       PV TPR     GK  
Sbjct: 91  RGFGRCASVERSRENSRGILEGESRPRRVASTRARDVQSNEEGSSPVATPRWCGRRGKGK 150

Query: 228 DSFAVKVRS 254
             FAVKV +
Sbjct: 151 ARFAVKVNA 159


>UniRef50_Q030A6 Cluster: Putative uncharacterized protein; n=2;
           Lactococcus lactis subsp. cremoris|Rep: Putative
           uncharacterized protein - Lactococcus lactis subsp.
           cremoris (strain SK11)
          Length = 192

 Score = 32.7 bits (71), Expect = 6.2
 Identities = 16/45 (35%), Positives = 29/45 (64%)
 Frame = +1

Query: 121 RIENERRQKERTVKKGQQHIVLFERLDNLRQ*ESVRIRSQLKSVL 255
           R E+  +QK RT+K+G+++ V  E +D+    +S  IR ++K +L
Sbjct: 71  RFESLTKQKPRTIKRGRKYQVFMENIDSYL--DSNEIRLEIKKLL 113


>UniRef50_Q9HPV0 Cluster: Cell division cycle protein; n=1;
           Halobacterium salinarum|Rep: Cell division cycle protein
           - Halobacterium salinarium (Halobacterium halobium)
          Length = 691

 Score = 32.7 bits (71), Expect = 6.2
 Identities = 16/47 (34%), Positives = 26/47 (55%)
 Frame = +1

Query: 61  PESVRQKTFDDPTDVG*DFQRIENERRQKERTVKKGQQHIVLFERLD 201
           P ++R  +   PT    D   ++  +R+  RTV+  Q++  LFERLD
Sbjct: 418 PSTLRDASVQTPTTTYQDIGGLDRAKREVVRTVEWPQRYPALFERLD 464


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 493,763,777
Number of Sequences: 1657284
Number of extensions: 9013544
Number of successful extensions: 28244
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28113
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 38321472724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)