Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0570
         (566 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   1.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.3  
AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical pro...    21   7.3  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   9.7  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +1

Query: 265 FNCLVLCNKPVHSLLVIVCVSPFIITVCD 351
           FN L+  N  ++ ++ I C +P IIT+ D
Sbjct: 76  FNILMK-NVTLNDVVFIFCSAPIIITILD 103


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 156  CQERAATHRPVRTPRQSPT 212
            C+E+   H+P  +  Q PT
Sbjct: 1152 CEEKKPGHKPSTSSWQKPT 1170


>AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical
           protein protein.
          Length = 86

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 304 LLVIVCVSPFII 339
           L++  CVSPF+I
Sbjct: 32  LIIAGCVSPFVI 43


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +2

Query: 257 VFNLTVSFCATNPFTV 304
           +FNL   +C  N F V
Sbjct: 154 IFNLVYVYCCDNNFNV 169


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,016
Number of Sequences: 336
Number of extensions: 2535
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)