Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0566
         (617 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70757-2|CAA94798.1|  611|Caenorhabditis elegans Hypothetical pr...    29   2.0  
DQ178244-1|ABA18183.1|  521|Caenorhabditis elegans putative sulf...    29   2.0  
AY954525-1|AAX34433.1|  611|Caenorhabditis elegans anion transpo...    29   2.0  
AY887917-1|AAX34429.1|  611|Caenorhabditis elegans anion transpo...    29   2.0  
Z70270-11|CAJ80821.1|  606|Caenorhabditis elegans Hypothetical p...    28   4.6  
Z70270-10|CAA94231.1|  726|Caenorhabditis elegans Hypothetical p...    28   4.6  
Z68215-18|CAJ80818.1|  606|Caenorhabditis elegans Hypothetical p...    28   4.6  
Z68215-17|CAA92458.1|  726|Caenorhabditis elegans Hypothetical p...    28   4.6  

>Z70757-2|CAA94798.1|  611|Caenorhabditis elegans Hypothetical
           protein ZK287.2 protein.
          Length = 611

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 15/58 (25%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
 Frame = -2

Query: 373 TQIHTESQNYLNIVYFLLIRKYLKPKHQNLIKPFLVSKNKTIFVLIKSIIP-YRQSRY 203
           TQ++T   ++L +   LL+  +L+P    ++   ++   K++F+ +K +   YR S+Y
Sbjct: 379 TQLYTIFSSFLLLTVILLLGPFLEPLPMCILACIVIVSLKSLFMQVKELPRLYRISKY 436


>DQ178244-1|ABA18183.1|  521|Caenorhabditis elegans putative sulfate
           transporter prestinprotein.
          Length = 521

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 15/58 (25%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
 Frame = -2

Query: 373 TQIHTESQNYLNIVYFLLIRKYLKPKHQNLIKPFLVSKNKTIFVLIKSIIP-YRQSRY 203
           TQ++T   ++L +   LL+  +L+P    ++   ++   K++F+ +K +   YR S+Y
Sbjct: 289 TQLYTIFSSFLLLTVILLLGPFLEPLPMCILACIVIVSLKSLFMQVKELPRLYRISKY 346


>AY954525-1|AAX34433.1|  611|Caenorhabditis elegans anion
           transporter SULP-8a protein.
          Length = 611

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 15/58 (25%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
 Frame = -2

Query: 373 TQIHTESQNYLNIVYFLLIRKYLKPKHQNLIKPFLVSKNKTIFVLIKSIIP-YRQSRY 203
           TQ++T   ++L +   LL+  +L+P    ++   ++   K++F+ +K +   YR S+Y
Sbjct: 379 TQLYTIFSSFLLLTVILLLGPFLEPLPMCILACIVIVSLKSLFMQVKELPRLYRISKY 436


>AY887917-1|AAX34429.1|  611|Caenorhabditis elegans anion
           transporter SULP-8b protein.
          Length = 611

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 15/58 (25%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
 Frame = -2

Query: 373 TQIHTESQNYLNIVYFLLIRKYLKPKHQNLIKPFLVSKNKTIFVLIKSIIP-YRQSRY 203
           TQ++T   ++L +   LL+  +L+P    ++   ++   K++F+ +K +   YR S+Y
Sbjct: 379 TQLYTIFSSFLLLTVILLLGPFLEPLPMCILACIVIVSLKSLFMQVKELPRLYRISKY 436


>Z70270-11|CAJ80821.1|  606|Caenorhabditis elegans Hypothetical
           protein C53B4.8b protein.
          Length = 606

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -1

Query: 458 LKQNAKRFVTKISKLVEFTPTDSHPTTCYTNSY*ITKLLEHCLFSANKE 312
           LK+N K  V + +K++        PT   T+SY   K L+H +F A ++
Sbjct: 253 LKENKKSSVQEFTKMIREL-AHIKPTKNMTSSYSNLKKLQHAVFGAREK 300


>Z70270-10|CAA94231.1|  726|Caenorhabditis elegans Hypothetical
           protein C53B4.8a protein.
          Length = 726

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -1

Query: 458 LKQNAKRFVTKISKLVEFTPTDSHPTTCYTNSY*ITKLLEHCLFSANKE 312
           LK+N K  V + +K++        PT   T+SY   K L+H +F A ++
Sbjct: 253 LKENKKSSVQEFTKMIREL-AHIKPTKNMTSSYSNLKKLQHAVFGAREK 300


>Z68215-18|CAJ80818.1|  606|Caenorhabditis elegans Hypothetical
           protein C53B4.8b protein.
          Length = 606

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -1

Query: 458 LKQNAKRFVTKISKLVEFTPTDSHPTTCYTNSY*ITKLLEHCLFSANKE 312
           LK+N K  V + +K++        PT   T+SY   K L+H +F A ++
Sbjct: 253 LKENKKSSVQEFTKMIREL-AHIKPTKNMTSSYSNLKKLQHAVFGAREK 300


>Z68215-17|CAA92458.1|  726|Caenorhabditis elegans Hypothetical
           protein C53B4.8a protein.
          Length = 726

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -1

Query: 458 LKQNAKRFVTKISKLVEFTPTDSHPTTCYTNSY*ITKLLEHCLFSANKE 312
           LK+N K  V + +K++        PT   T+SY   K L+H +F A ++
Sbjct: 253 LKENKKSSVQEFTKMIREL-AHIKPTKNMTSSYSNLKKLQHAVFGAREK 300


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,294,297
Number of Sequences: 27780
Number of extensions: 266596
Number of successful extensions: 540
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 540
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)