Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0565
         (671 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    25   2.2  
DQ396550-1|ABD60145.1|  113|Anopheles gambiae adipokinetic hormo...    24   3.8  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         24   5.0  
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.           23   8.8  
AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.          23   8.8  

>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -2

Query: 493 LSCVVAKDSPFQLLIDLKKHQFSIVSSRHLV 401
           ++ V   D PFQ +ID ++  F +V  R +V
Sbjct: 54  VAVVSVGDYPFQRIIDNQREDFVVVEMRGIV 84


>DQ396550-1|ABD60145.1|  113|Anopheles gambiae adipokinetic hormone
           II protein.
          Length = 113

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = -2

Query: 427 SIVSSRHLVSSVNVLVYFHTISLCIATLTAQTYTQGKNAAHLKM 296
           SI SSRHL + + +LV    + L + +    T+++  NA    M
Sbjct: 3   SISSSRHLAAKLFLLVALCAVLLPVPSAGQVTFSRDWNAGKRAM 46


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
 Frame = -1

Query: 353 SNTDSSDVHSGEKRSPSKNVFTSSWPHKLLVADRSLAKCL-TIALTAANFSAFIRLDNLS 177
           + T +S  HS   +  S+ +FT+ +  ++L + R+   C      TA  +    R     
Sbjct: 30  ATTTTSPSHSNAAKMGSRRIFTAQFKLQVLDSYRNDGDCKGNQRATARKYGIHRRQIQKW 89

Query: 176 SSIPSNSLRDKITNG 132
             + SN LR  + NG
Sbjct: 90  LQVESN-LRSVVANG 103


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 397 MKPGVVSLQWKIDVSLSQSTIETENPSPQRRK 492
           M PG+     K   SL+ STI+ +  +P  RK
Sbjct: 306 MYPGIADRMQKEITSLAPSTIKIKIIAPPERK 337


>AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +1

Query: 325 ECTSELSVLLCTEKLYENIPKHLRMKP 405
           EC+     +LCT  + +NI K L   P
Sbjct: 133 ECSFIFLYILCTMSIRQNIQKMLGFAP 159


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 667,841
Number of Sequences: 2352
Number of extensions: 12345
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)