Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0565
(671 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC065729-1|AAH65729.1| 224|Homo sapiens COMM domain containing ... 40 0.011
BC003055-1|AAH03055.1| 224|Homo sapiens COMM domain containing ... 40 0.011
BC002672-1|AAH02672.1| 224|Homo sapiens COMM domain containing ... 40 0.011
AK023070-1|BAB14389.1| 224|Homo sapiens protein ( Homo sapiens ... 40 0.011
AK001477-1|BAA91714.1| 224|Homo sapiens protein ( Homo sapiens ... 40 0.011
AF290195-1|AAG09915.1| 224|Homo sapiens unknown protein. 40 0.011
AF113540-1|AAF14877.1| 223|Homo sapiens hypothalamus protein HT... 40 0.011
AK129585-1|BAC85186.1| 235|Homo sapiens protein ( Homo sapiens ... 31 3.8
AB064165-1|BAC01793.1| 269|Homo sapiens immunoglobulin lambda l... 31 3.8
BC071978-1|AAH71978.1| 502|Homo sapiens TBC1D2 protein protein. 31 5.0
BC028918-1|AAH28918.1| 468|Homo sapiens TBC1D2 protein protein. 31 5.0
AY026527-1|AAK07684.1| 917|Homo sapiens prostate antigen PARIS-... 31 5.0
AL591502-2|CAI12580.1| 917|Homo sapiens TBC1 domain family, mem... 31 5.0
AL360081-4|CAH71887.1| 917|Homo sapiens TBC1 domain family, mem... 31 5.0
AL360081-1|CAH71884.1| 710|Homo sapiens TBC1 domain family, mem... 31 5.0
AL137073-10|CAI13894.1| 468|Homo sapiens TBC1 domain family, me... 31 5.0
AL137073-3|CAI13885.1| 917|Homo sapiens TBC1 domain family, mem... 31 5.0
AL137073-1|CAI13883.1| 710|Homo sapiens TBC1 domain family, mem... 31 5.0
AK026105-1|BAB15361.1| 710|Homo sapiens protein ( Homo sapiens ... 31 5.0
>BC065729-1|AAH65729.1| 224|Homo sapiens COMM domain containing 5
protein.
Length = 224
Score = 39.5 bits (88), Expect = 0.011
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +1
Query: 403 PGVVSLQWKIDVSLSQSTIETE-NPSPQRRKEIMHTLTHVIVTFVLTDGQIRTYRLSISQ 579
P V +W++DV++S S + PS V++ L+DG + + ++
Sbjct: 150 PHVADFRWRVDVAISTSALARSLQPS-------------VLMQLKLSDGSAYRFEVPTAK 196
Query: 580 FHELRYVIASALKNMIILERR 642
F ELRY +A LK M LE+R
Sbjct: 197 FQELRYSVALVLKEMADLEKR 217
>BC003055-1|AAH03055.1| 224|Homo sapiens COMM domain containing 5
protein.
Length = 224
Score = 39.5 bits (88), Expect = 0.011
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +1
Query: 403 PGVVSLQWKIDVSLSQSTIETE-NPSPQRRKEIMHTLTHVIVTFVLTDGQIRTYRLSISQ 579
P V +W++DV++S S + PS V++ L+DG + + ++
Sbjct: 150 PHVADFRWRVDVAISTSALARSLQPS-------------VLMQLKLSDGSAYRFEVPTAK 196
Query: 580 FHELRYVIASALKNMIILERR 642
F ELRY +A LK M LE+R
Sbjct: 197 FQELRYSVALVLKEMADLEKR 217
>BC002672-1|AAH02672.1| 224|Homo sapiens COMM domain containing 5
protein.
Length = 224
Score = 39.5 bits (88), Expect = 0.011
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +1
Query: 403 PGVVSLQWKIDVSLSQSTIETE-NPSPQRRKEIMHTLTHVIVTFVLTDGQIRTYRLSISQ 579
P V +W++DV++S S + PS V++ L+DG + + ++
Sbjct: 150 PHVADFRWRVDVAISTSALARSLQPS-------------VLMQLKLSDGSAYRFEVPTAK 196
Query: 580 FHELRYVIASALKNMIILERR 642
F ELRY +A LK M LE+R
Sbjct: 197 FQELRYSVALVLKEMADLEKR 217
>AK023070-1|BAB14389.1| 224|Homo sapiens protein ( Homo sapiens
cDNA FLJ13008 fis, clone NT2RP3000456. ).
Length = 224
Score = 39.5 bits (88), Expect = 0.011
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +1
Query: 403 PGVVSLQWKIDVSLSQSTIETE-NPSPQRRKEIMHTLTHVIVTFVLTDGQIRTYRLSISQ 579
P V +W++DV++S S + PS V++ L+DG + + ++
Sbjct: 150 PHVADFRWRVDVAISTSALARSLQPS-------------VLMQLKLSDGSAYRFEVPTAK 196
Query: 580 FHELRYVIASALKNMIILERR 642
F ELRY +A LK M LE+R
Sbjct: 197 FQELRYSVALVLKEMADLEKR 217
>AK001477-1|BAA91714.1| 224|Homo sapiens protein ( Homo sapiens
cDNA FLJ10615 fis, clone NT2RP2005441. ).
Length = 224
Score = 39.5 bits (88), Expect = 0.011
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +1
Query: 403 PGVVSLQWKIDVSLSQSTIETE-NPSPQRRKEIMHTLTHVIVTFVLTDGQIRTYRLSISQ 579
P V +W++DV++S S + PS V++ L+DG + + ++
Sbjct: 150 PHVADFRWRVDVAISTSALARSLQPS-------------VLMQLKLSDGSAYRFEVPTAK 196
Query: 580 FHELRYVIASALKNMIILERR 642
F ELRY +A LK M LE+R
Sbjct: 197 FQELRYSVALVLKEMADLEKR 217
>AF290195-1|AAG09915.1| 224|Homo sapiens unknown protein.
Length = 224
Score = 39.5 bits (88), Expect = 0.011
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +1
Query: 403 PGVVSLQWKIDVSLSQSTIETE-NPSPQRRKEIMHTLTHVIVTFVLTDGQIRTYRLSISQ 579
P V +W++DV++S S + PS V++ L+DG + + ++
Sbjct: 150 PHVADFRWRVDVAISTSALARSLQPS-------------VLMQLKLSDGSAYRFEVPTAK 196
Query: 580 FHELRYVIASALKNMIILERR 642
F ELRY +A LK M LE+R
Sbjct: 197 FQELRYSVALVLKEMADLEKR 217
>AF113540-1|AAF14877.1| 223|Homo sapiens hypothalamus protein HT002
protein.
Length = 223
Score = 39.5 bits (88), Expect = 0.011
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +1
Query: 403 PGVVSLQWKIDVSLSQSTIETE-NPSPQRRKEIMHTLTHVIVTFVLTDGQIRTYRLSISQ 579
P V +W++DV++S S + PS V++ L+DG + + ++
Sbjct: 149 PHVADFRWRVDVAISTSALARSLQPS-------------VLMQLKLSDGSAYRFEVPTAK 195
Query: 580 FHELRYVIASALKNMIILERR 642
F ELRY +A LK M LE+R
Sbjct: 196 FQELRYSVALVLKEMADLEKR 216
>AK129585-1|BAC85186.1| 235|Homo sapiens protein ( Homo sapiens
cDNA FLJ26074 fis, clone RCT02007, highly similar to Ig
lambda chain C regions. ).
Length = 235
Score = 31.1 bits (67), Expect = 3.8
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 403 PGVVSLQWKIDVSLSQSTIETENPSPQ 483
PGVV++ WK D S ++ +ET PS Q
Sbjct: 164 PGVVTVAWKADSSPVKAGVETTTPSKQ 190
>AB064165-1|BAC01793.1| 269|Homo sapiens immunoglobulin lambda
light chain VLJ region protein.
Length = 269
Score = 31.1 bits (67), Expect = 3.8
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 403 PGVVSLQWKIDVSLSQSTIETENPSPQ 483
PGVV++ WK D S ++ +ET PS Q
Sbjct: 164 PGVVTVAWKADSSPVKAGVETTTPSKQ 190
>BC071978-1|AAH71978.1| 502|Homo sapiens TBC1D2 protein protein.
Length = 502
Score = 30.7 bits (66), Expect = 5.0
Identities = 19/87 (21%), Positives = 43/87 (49%)
Frame = +1
Query: 34 IEMSEHLEFISENISQWSAVSKVTPEIQKKEIRPFVILSLKELEGIEDERLSSLMNAEKF 213
+E+ ++L F ++ IS S+ I ++ PF + L++L + ERL + + +
Sbjct: 417 LEIYQYLRFFTKTISN----SRKLMNIAFNDMNPFRMKQLRQLRMVHRERLEAELRELEQ 472
Query: 214 AAVRAIVRHFARLRSATKSLWGQDDVK 294
+ R +R R+ ++ +D+V+
Sbjct: 473 LKAEYLERRASRRRAVSEGCASEDEVE 499
>BC028918-1|AAH28918.1| 468|Homo sapiens TBC1D2 protein protein.
Length = 468
Score = 30.7 bits (66), Expect = 5.0
Identities = 19/87 (21%), Positives = 43/87 (49%)
Frame = +1
Query: 34 IEMSEHLEFISENISQWSAVSKVTPEIQKKEIRPFVILSLKELEGIEDERLSSLMNAEKF 213
+E+ ++L F ++ IS S+ I ++ PF + L++L + ERL + + +
Sbjct: 383 LEIYQYLRFFTKTISN----SRKLMNIAFNDMNPFRMKQLRQLRMVHRERLEAELRELEQ 438
Query: 214 AAVRAIVRHFARLRSATKSLWGQDDVK 294
+ R +R R+ ++ +D+V+
Sbjct: 439 LKAEYLERRASRRRAVSEGCASEDEVE 465
>AY026527-1|AAK07684.1| 917|Homo sapiens prostate antigen PARIS-1
protein.
Length = 917
Score = 30.7 bits (66), Expect = 5.0
Identities = 19/87 (21%), Positives = 43/87 (49%)
Frame = +1
Query: 34 IEMSEHLEFISENISQWSAVSKVTPEIQKKEIRPFVILSLKELEGIEDERLSSLMNAEKF 213
+E+ ++L F ++ IS S+ I ++ PF + L++L + ERL + + +
Sbjct: 832 LEIYQYLRFFTKTISN----SRKLMNIAFNDMNPFRMKQLRQLRMVHRERLEAELRELEQ 887
Query: 214 AAVRAIVRHFARLRSATKSLWGQDDVK 294
+ R +R R+ ++ +D+V+
Sbjct: 888 LKAEYLERRASRRRAVSEGCASEDEVE 914
>AL591502-2|CAI12580.1| 917|Homo sapiens TBC1 domain family, member 2
protein.
Length = 917
Score = 30.7 bits (66), Expect = 5.0
Identities = 19/87 (21%), Positives = 43/87 (49%)
Frame = +1
Query: 34 IEMSEHLEFISENISQWSAVSKVTPEIQKKEIRPFVILSLKELEGIEDERLSSLMNAEKF 213
+E+ ++L F ++ IS S+ I ++ PF + L++L + ERL + + +
Sbjct: 832 LEIYQYLRFFTKTISN----SRKLMNIAFNDMNPFRMKQLRQLRMVHRERLEAELRELEQ 887
Query: 214 AAVRAIVRHFARLRSATKSLWGQDDVK 294
+ R +R R+ ++ +D+V+
Sbjct: 888 LKAEYLERRASRRRAVSEGCASEDEVE 914
>AL360081-4|CAH71887.1| 917|Homo sapiens TBC1 domain family, member 2
protein.
Length = 917
Score = 30.7 bits (66), Expect = 5.0
Identities = 19/87 (21%), Positives = 43/87 (49%)
Frame = +1
Query: 34 IEMSEHLEFISENISQWSAVSKVTPEIQKKEIRPFVILSLKELEGIEDERLSSLMNAEKF 213
+E+ ++L F ++ IS S+ I ++ PF + L++L + ERL + + +
Sbjct: 832 LEIYQYLRFFTKTISN----SRKLMNIAFNDMNPFRMKQLRQLRMVHRERLEAELRELEQ 887
Query: 214 AAVRAIVRHFARLRSATKSLWGQDDVK 294
+ R +R R+ ++ +D+V+
Sbjct: 888 LKAEYLERRASRRRAVSEGCASEDEVE 914
>AL360081-1|CAH71884.1| 710|Homo sapiens TBC1 domain family, member
2 protein.
Length = 710
Score = 30.7 bits (66), Expect = 5.0
Identities = 19/87 (21%), Positives = 43/87 (49%)
Frame = +1
Query: 34 IEMSEHLEFISENISQWSAVSKVTPEIQKKEIRPFVILSLKELEGIEDERLSSLMNAEKF 213
+E+ ++L F ++ IS S+ I ++ PF + L++L + ERL + + +
Sbjct: 625 LEIYQYLRFFTKTISN----SRKLMNIAFNDMNPFRMKQLRQLRMVHRERLEAELRELEQ 680
Query: 214 AAVRAIVRHFARLRSATKSLWGQDDVK 294
+ R +R R+ ++ +D+V+
Sbjct: 681 LKAEYLERRASRRRAVSEGCASEDEVE 707
>AL137073-10|CAI13894.1| 468|Homo sapiens TBC1 domain family,
member 2 protein.
Length = 468
Score = 30.7 bits (66), Expect = 5.0
Identities = 19/87 (21%), Positives = 43/87 (49%)
Frame = +1
Query: 34 IEMSEHLEFISENISQWSAVSKVTPEIQKKEIRPFVILSLKELEGIEDERLSSLMNAEKF 213
+E+ ++L F ++ IS S+ I ++ PF + L++L + ERL + + +
Sbjct: 383 LEIYQYLRFFTKTISN----SRKLMNIAFNDMNPFRMKQLRQLRMVHRERLEAELRELEQ 438
Query: 214 AAVRAIVRHFARLRSATKSLWGQDDVK 294
+ R +R R+ ++ +D+V+
Sbjct: 439 LKAEYLERRASRRRAVSEGCASEDEVE 465
>AL137073-3|CAI13885.1| 917|Homo sapiens TBC1 domain family, member 2
protein.
Length = 917
Score = 30.7 bits (66), Expect = 5.0
Identities = 19/87 (21%), Positives = 43/87 (49%)
Frame = +1
Query: 34 IEMSEHLEFISENISQWSAVSKVTPEIQKKEIRPFVILSLKELEGIEDERLSSLMNAEKF 213
+E+ ++L F ++ IS S+ I ++ PF + L++L + ERL + + +
Sbjct: 832 LEIYQYLRFFTKTISN----SRKLMNIAFNDMNPFRMKQLRQLRMVHRERLEAELRELEQ 887
Query: 214 AAVRAIVRHFARLRSATKSLWGQDDVK 294
+ R +R R+ ++ +D+V+
Sbjct: 888 LKAEYLERRASRRRAVSEGCASEDEVE 914
>AL137073-1|CAI13883.1| 710|Homo sapiens TBC1 domain family, member
2 protein.
Length = 710
Score = 30.7 bits (66), Expect = 5.0
Identities = 19/87 (21%), Positives = 43/87 (49%)
Frame = +1
Query: 34 IEMSEHLEFISENISQWSAVSKVTPEIQKKEIRPFVILSLKELEGIEDERLSSLMNAEKF 213
+E+ ++L F ++ IS S+ I ++ PF + L++L + ERL + + +
Sbjct: 625 LEIYQYLRFFTKTISN----SRKLMNIAFNDMNPFRMKQLRQLRMVHRERLEAELRELEQ 680
Query: 214 AAVRAIVRHFARLRSATKSLWGQDDVK 294
+ R +R R+ ++ +D+V+
Sbjct: 681 LKAEYLERRASRRRAVSEGCASEDEVE 707
>AK026105-1|BAB15361.1| 710|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22452 fis, clone HRC09667. ).
Length = 710
Score = 30.7 bits (66), Expect = 5.0
Identities = 19/87 (21%), Positives = 43/87 (49%)
Frame = +1
Query: 34 IEMSEHLEFISENISQWSAVSKVTPEIQKKEIRPFVILSLKELEGIEDERLSSLMNAEKF 213
+E+ ++L F ++ IS S+ I ++ PF + L++L + ERL + + +
Sbjct: 625 LEIYQYLRFFTKTISN----SRKLMNIAFNDMNPFRMKQLRQLRMVHRERLEAELRELEQ 680
Query: 214 AAVRAIVRHFARLRSATKSLWGQDDVK 294
+ R +R R+ ++ +D+V+
Sbjct: 681 LKAEYLERRASRRRAVSEGCASEDEVE 707
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,150,197
Number of Sequences: 237096
Number of extensions: 1802136
Number of successful extensions: 4314
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4307
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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